RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 IGHV3OR16-10A0A075B7F0 116 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 PF4P02776 101 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 MIAQ16674 131 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 IGLV2-18A0A075B6J9 118 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 LGALS9O00182 355 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 XGP55808 180 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 LINC00527Q9UJ94 153 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 MSRB2Q9Y3D2 182 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 A0A0J9YXV3 536 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 TRBV27A0A0K0K1C4 114 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 TMEM223A0PJW6 202 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 J3KT08 172 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 TIMM17BO60830 172 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 NPC2P61916 151 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 C5orf56Q8N8D9 126 aa6.55□□□□□ -1.36
GABRA1-202ENST00000393943 H0YGX0 51 aa6.55□□□□□ -1.36
GABRA1-202ENST00000393943 Q8N6K4 173 aa6.55□□□□□ -1.36
GABRA1-202ENST00000393943 SPTA1P02549 2419 aa6.55□□□□□ -1.36
GABRA1-202ENST00000393943 TMEM89A2RUT3 159 aa6.55□□□□□ -1.36
GABRA1-202ENST00000393943 LINC00158P58513 81 aa6.55□□□□□ -1.36
GABRA1-202ENST00000393943 NAV3Q8IVL0 2385 aa6.55□□□□□ -1.36
GABRA1-202ENST00000393943 RPL39P62891 51 aaKnown RBP6.55□□□□□ -1.36
GABRA1-202ENST00000393943 PRR30Q53SZ7 412 aaPredicted RBP6.55□□□□□ -1.36
GABRA1-202ENST00000393943 CCDC140Q96MF4 163 aa6.55□□□□□ -1.36
GABRA1-202ENST00000393943 TOMM7Q9P0U1 55 aa6.55□□□□□ -1.36
GABRA1-202ENST00000393943 PYGO1Q9Y3Y4 419 aa6.54□□□□□ -1.36
GABRA1-202ENST00000393943 TINCRA0A1B0GVN0 87 aa6.54□□□□□ -1.36
GABRA1-202ENST00000393943 IGHV3-30-3P0DP02 117 aa6.54□□□□□ -1.36
GABRA1-202ENST00000393943 STHQ8IWL8 128 aa6.54□□□□□ -1.36
GABRA1-202ENST00000393943 ZFAND2AQ8N6M9 145 aa6.54□□□□□ -1.36
GABRA1-202ENST00000393943 SIRPDQ9H106 197 aa6.54□□□□□ -1.36
GABRA1-202ENST00000393943 UQCRQO14949 82 aa6.54□□□□□ -1.36
GABRA1-202ENST00000393943 DSCAMO60469 2012 aa6.54□□□□□ -1.36
GABRA1-202ENST00000393943 BAALC-AS2P0C853 105 aa6.54□□□□□ -1.36
GABRA1-202ENST00000393943 SPINK13Q1W4C9 94 aa6.54□□□□□ -1.36
GABRA1-202ENST00000393943 ITLN2Q8WWU7 325 aaPredicted RBP6.54□□□□□ -1.36
GABRA1-202ENST00000393943 BPESC1Q9GZL8 116 aa6.54□□□□□ -1.36
GABRA1-202ENST00000393943 B4DSR2 109 aa6.53□□□□□ -1.36
GABRA1-202ENST00000393943 FAM236AA0A1B0GUQ0 79 aa6.53□□□□□ -1.36
GABRA1-202ENST00000393943 FAM236BA0A1B0GV22 79 aa6.53□□□□□ -1.36
GABRA1-202ENST00000393943 NCOR1O75376 2440 aa6.53□□□□□ -1.36
GABRA1-202ENST00000393943 LY6HO94772 140 aa6.53□□□□□ -1.36
GABRA1-202ENST00000393943 POLR2KP53803 58 aaKnown RBP6.53□□□□□ -1.36
GABRA1-202ENST00000393943 CFAP161Q6P656 301 aa6.53□□□□□ -1.36
GABRA1-202ENST00000393943 GPHB5Q86YW7 130 aa6.53□□□□□ -1.36
GABRA1-202ENST00000393943 IGHV3OR16-12A0A075B7B8 117 aa6.52□□□□□ -1.37
GABRA1-202ENST00000393943 ZNF22P17026 224 aaPredicted RBP6.52□□□□□ -1.37
GABRA1-202ENST00000393943 INSL3P51460 131 aa6.52□□□□□ -1.37
GABRA1-202ENST00000393943 MRGPRG-AS1Q2M3A8 158 aa6.52□□□□□ -1.37
GABRA1-202ENST00000393943 CLUHP3Q96NS8 147 aa6.52□□□□□ -1.37
GABRA1-202ENST00000393943 K7ENP7 123 aa6.52□□□□□ -1.37
GABRA1-202ENST00000393943 U3KQE9 123 aa6.52□□□□□ -1.37
GABRA1-202ENST00000393943 GPR179Q6PRD1 2367 aa6.52□□□□□ -1.37
GABRA1-202ENST00000393943 ELANEP08246 267 aa6.52□□□□□ -1.37
GABRA1-202ENST00000393943 RUSC1-AS1Q66K80 236 aa6.52□□□□□ -1.37
GABRA1-202ENST00000393943 PIP4P2Q8N4L2 257 aa6.52□□□□□ -1.37
GABRA1-202ENST00000393943 KLK9Q9UKQ9 250 aa6.52□□□□□ -1.37
GABRA1-202ENST00000393943 COX7A2LO14548 114 aa6.52□□□□□ -1.37
GABRA1-202ENST00000393943 PAX4O43316 350 aa6.52□□□□□ -1.37
GABRA1-202ENST00000393943 ARFGEF3Q5TH69 2177 aa6.51□□□□□ -1.37
GABRA1-202ENST00000393943 TRGV2A0A075B6R0 118 aa6.51□□□□□ -1.37
GABRA1-202ENST00000393943 IGHV3-73A0A0B4J1V6 119 aa6.51□□□□□ -1.37
GABRA1-202ENST00000393943 F6UB75 175 aa6.51□□□□□ -1.37
GABRA1-202ENST00000393943 TMEM263Q8WUH6 116 aaKnown RBP6.51□□□□□ -1.37
GABRA1-202ENST00000393943 C11orf21Q9P2W6 132 aa6.51□□□□□ -1.37
GABRA1-202ENST00000393943 A0A0U1RRA0 63 aa6.51□□□□□ -1.37
GABRA1-202ENST00000393943 IGIPA6NJ69 53 aa6.51□□□□□ -1.37
GABRA1-202ENST00000393943 Q9H8V8 135 aa6.51□□□□□ -1.37
GABRA1-202ENST00000393943 PRO0461Q9UI25 63 aa6.51□□□□□ -1.37
GABRA1-202ENST00000393943 TRAV13-1A0A0B4J241 112 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 IGHG2P01859 326 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 UBL5Q9BZL1 73 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 CNOT1A5YKK6 2376 aaKnown RBP6.5□□□□□ -1.37
GABRA1-202ENST00000393943 IGF1P05019 195 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 HIST1H4AP62805 103 aaKnown RBP6.5□□□□□ -1.37
GABRA1-202ENST00000393943 PLXNB1O43157 2135 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 ZGRF1Q86YA3 2104 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 IGHV3-16A0A0C4DH30 117 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 H3BQ85 93 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 TRIAP1O43715 76 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 BRD3OSQ6XYD6 125 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 DEFB104AQ8WTQ1 72 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 VSIG2Q96IQ7 327 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 TMEM243Q9BU79 118 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 CDIP1Q9H305 208 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 TEX49A0A1B0GTD5 131 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 LST1O00453 97 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 CXCL5P42830 114 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 PRR14LQ5THK1 2151 aa6.5□□□□□ -1.37
GABRA1-202ENST00000393943 NXPH4O95158 308 aa6.49□□□□□ -1.37
GABRA1-202ENST00000393943 DEFB131AP59861 70 aa6.49□□□□□ -1.37
GABRA1-202ENST00000393943 IGLV4-3A0A075B6K6 122 aa6.49□□□□□ -1.37
GABRA1-202ENST00000393943 TRGV1A0A0A0MS02 117 aa6.49□□□□□ -1.37
GABRA1-202ENST00000393943 GAS8-AS1O95177 125 aa6.49□□□□□ -1.37
GABRA1-202ENST00000393943 MSMBP08118 114 aa6.49□□□□□ -1.37
GABRA1-202ENST00000393943 TRAV12-2A0A075B6T6 113 aa6.49□□□□□ -1.37
GABRA1-202ENST00000393943 TRGV4A0A0C4DH28 118 aa6.49□□□□□ -1.37
GABRA1-202ENST00000393943 SYNJ2BPP57105 145 aa6.49□□□□□ -1.37
GABRA1-202ENST00000393943 PIK3CD-AS1Q5SR53 167 aa6.49□□□□□ -1.37
GABRA1-202ENST00000393943 C3orf22Q8N5N4 141 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms