RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 UBE2D2P62837 147 aa9.9□□□□□ -0.82
CHMP3-202ENST00000393773 Q0VG73 95 aa9.9□□□□□ -0.82
CHMP3-202ENST00000393773 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.9□□□□□ -0.82
CHMP3-202ENST00000393773 TRAV34A0A0B4J273 112 aa9.89□□□□□ -0.83
CHMP3-202ENST00000393773 FABP5P3A8MUU1 101 aa9.89□□□□□ -0.83
CHMP3-202ENST00000393773 KRBOX1C9JBD0 128 aa9.89□□□□□ -0.83
CHMP3-202ENST00000393773 USP17L23D6RBM5 183 aa9.89□□□□□ -0.83
CHMP3-202ENST00000393773 IFITM3Q01628 133 aa9.89□□□□□ -0.83
CHMP3-202ENST00000393773 LINC00299Q6ZSB3 139 aa9.89□□□□□ -0.83
CHMP3-202ENST00000393773 HSD17B11Q8NBQ5 300 aa9.89□□□□□ -0.83
CHMP3-202ENST00000393773 OR11H4Q8NGC9 324 aa9.89□□□□□ -0.83
CHMP3-202ENST00000393773 SFRP2Q96HF1 295 aa9.89□□□□□ -0.83
CHMP3-202ENST00000393773 MARVELD1Q9BSK0 173 aa9.89□□□□□ -0.83
CHMP3-202ENST00000393773 PSMG3Q9BT73 122 aaPredicted RBP9.89□□□□□ -0.83
CHMP3-202ENST00000393773 TMEM167BQ9NRX6 74 aa9.89□□□□□ -0.83
CHMP3-202ENST00000393773 TRBV10-1A0A0K0K1A3 114 aa9.88□□□□□ -0.83
CHMP3-202ENST00000393773 PANO1I0J062 215 aa9.88□□□□□ -0.83
CHMP3-202ENST00000393773 SSNA1O43805 119 aa9.88□□□□□ -0.83
CHMP3-202ENST00000393773 UPK1BO75841 260 aa9.88□□□□□ -0.83
CHMP3-202ENST00000393773 CXorf1O96002 111 aa9.88□□□□□ -0.83
CHMP3-202ENST00000393773 ARMS2P0C7Q2 107 aa9.88□□□□□ -0.83
CHMP3-202ENST00000393773 CRIP1P50238 77 aa9.88□□□□□ -0.83
CHMP3-202ENST00000393773 MPV17L2Q567V2 206 aa9.88□□□□□ -0.83
CHMP3-202ENST00000393773 ZC2HC1AQ96GY0 325 aa9.88□□□□□ -0.83
CHMP3-202ENST00000393773 A0A1W2PRE2 83 aa9.87□□□□□ -0.83
CHMP3-202ENST00000393773 M0R036 132 aa9.87□□□□□ -0.83
CHMP3-202ENST00000393773 HLA-DQA1P01909 254 aa9.87□□□□□ -0.83
CHMP3-202ENST00000393773 CRPP02741 224 aa9.87□□□□□ -0.83
CHMP3-202ENST00000393773 PRSS1P07477 247 aa9.87□□□□□ -0.83
CHMP3-202ENST00000393773 ATP6V0CP27449 155 aa9.87□□□□□ -0.83
CHMP3-202ENST00000393773 KCNIP4Q6PIL6 250 aa9.87□□□□□ -0.83
CHMP3-202ENST00000393773 OR10G8Q8NGN5 311 aa9.87□□□□□ -0.83
CHMP3-202ENST00000393773 S100ZQ8WXG8 99 aa9.87□□□□□ -0.83
CHMP3-202ENST00000393773 GRIFINA4D1Z8 144 aa9.86□□□□□ -0.83
CHMP3-202ENST00000393773 PEX7O00628 323 aa9.86□□□□□ -0.83
CHMP3-202ENST00000393773 RPL36AP83881 106 aaKnown RBP9.86□□□□□ -0.83
CHMP3-202ENST00000393773 COX8CQ7Z4L0 72 aa9.86□□□□□ -0.83
CHMP3-202ENST00000393773 C15orf54Q8N8G6 183 aa9.86□□□□□ -0.83
CHMP3-202ENST00000393773 C9orf163Q8N9P6 203 aa9.86□□□□□ -0.83
CHMP3-202ENST00000393773 RPL36ALQ969Q0 106 aaKnown RBP9.86□□□□□ -0.83
CHMP3-202ENST00000393773 NDUFA13Q9P0J0 144 aa9.86□□□□□ -0.83
CHMP3-202ENST00000393773 TRBV7-3A0A075B6L6 115 aa9.85□□□□□ -0.83
CHMP3-202ENST00000393773 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
CHMP3-202ENST00000393773 M0R381 172 aa9.85□□□□□ -0.83
CHMP3-202ENST00000393773 SH2D1AO60880 128 aa9.85□□□□□ -0.83
CHMP3-202ENST00000393773 PHLDA3Q9Y5J5 127 aa9.85□□□□□ -0.83
CHMP3-202ENST00000393773 MBP02144 154 aa9.84□□□□□ -0.83
CHMP3-202ENST00000393773 ANGP03950 147 aaKnown RBP9.84□□□□□ -0.83
CHMP3-202ENST00000393773 SERF2P84101 59 aa9.84□□□□□ -0.83
CHMP3-202ENST00000393773 LINC01559Q495D7 138 aa9.84□□□□□ -0.83
CHMP3-202ENST00000393773 DGAT2L7PQ6IED9 249 aa9.84□□□□□ -0.83
CHMP3-202ENST00000393773 KRTAP26-1Q6PEX3 210 aa9.84□□□□□ -0.83
CHMP3-202ENST00000393773 ZFP82Q8N141 532 aa9.84□□□□□ -0.83
CHMP3-202ENST00000393773 ACTR3CQ9C0K3 210 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-202ENST00000393773 TPT1P13693 172 aaKnown RBP9.83□□□□□ -0.84
CHMP3-202ENST00000393773 CIRBPQ14011 172 aaKnown RBP9.83□□□□□ -0.84
CHMP3-202ENST00000393773 ZNF726P1Q15940 193 aa9.83□□□□□ -0.84
CHMP3-202ENST00000393773 MIAQ16674 131 aa9.83□□□□□ -0.84
CHMP3-202ENST00000393773 Q6ZRU5 148 aa9.83□□□□□ -0.84
CHMP3-202ENST00000393773 NEXN-AS1Q8NBZ9 246 aa9.83□□□□□ -0.84
CHMP3-202ENST00000393773 TMEM262E9PQX1 116 aa9.82□□□□□ -0.84
CHMP3-202ENST00000393773 PTTG1O95997 202 aa9.82□□□□□ -0.84
CHMP3-202ENST00000393773 IFNA7P01567 189 aa9.82□□□□□ -0.84
CHMP3-202ENST00000393773 UBE2G2P60604 165 aa9.82□□□□□ -0.84
CHMP3-202ENST00000393773 FAM162BQ5T6X4 162 aa9.82□□□□□ -0.84
CHMP3-202ENST00000393773 PRR27Q6MZM9 219 aa9.82□□□□□ -0.84
CHMP3-202ENST00000393773 SDIM1Q6ZPB5 146 aa9.82□□□□□ -0.84
CHMP3-202ENST00000393773 AQP10Q96PS8 301 aa9.82□□□□□ -0.84
CHMP3-202ENST00000393773 PRR34Q9NV39 138 aa9.82□□□□□ -0.84
CHMP3-202ENST00000393773 TNFSF18Q9UNG2 199 aa9.82□□□□□ -0.84
CHMP3-202ENST00000393773 TMSB15BA0A087X1C1 80 aa9.81□□□□□ -0.84
CHMP3-202ENST00000393773 RPL19P84098 196 aaKnown RBP9.81□□□□□ -0.84
CHMP3-202ENST00000393773 ZNF674Q2M3X9 581 aa9.81□□□□□ -0.84
CHMP3-202ENST00000393773 HIST1H2BAQ96A08 127 aa9.81□□□□□ -0.84
CHMP3-202ENST00000393773 FAM74A7A6NL05 159 aa9.8□□□□□ -0.84
CHMP3-202ENST00000393773 RAB4BP61018 213 aa9.8□□□□□ -0.84
CHMP3-202ENST00000393773 CLPSL2Q6UWE3 100 aa9.8□□□□□ -0.84
CHMP3-202ENST00000393773 ZFP30Q9Y2G7 519 aa9.8□□□□□ -0.84
CHMP3-202ENST00000393773 CTXND1A0A1B0GTU2 59 aa9.79□□□□□ -0.84
CHMP3-202ENST00000393773 PKIAP61925 76 aa9.79□□□□□ -0.84
CHMP3-202ENST00000393773 CNBPP62633 177 aaKnown RBP9.79□□□□□ -0.84
CHMP3-202ENST00000393773 ZNF56Q15929 161 aa9.79□□□□□ -0.84
CHMP3-202ENST00000393773 NTM-AS1Q6ZSK4 140 aa9.79□□□□□ -0.84
CHMP3-202ENST00000393773 FMC1Q96HJ9 113 aa9.79□□□□□ -0.84
CHMP3-202ENST00000393773 CHCHD5Q9BSY4 110 aa9.79□□□□□ -0.84
CHMP3-202ENST00000393773 A0A0D9SG52 128 aa9.78□□□□□ -0.84
CHMP3-202ENST00000393773 TRBV6-1A0A0K0K1D8 114 aa9.78□□□□□ -0.84
CHMP3-202ENST00000393773 LTAP01374 205 aa9.78□□□□□ -0.84
CHMP3-202ENST00000393773 VAX2Q9UIW0 290 aa9.78□□□□□ -0.84
CHMP3-202ENST00000393773 RBX1P62877 108 aa9.77□□□□□ -0.85
CHMP3-202ENST00000393773 OR10AG1Q8NH19 301 aa9.77□□□□□ -0.85
CHMP3-202ENST00000393773 NKX6-2Q9C056 277 aaPredicted RBP9.77□□□□□ -0.85
CHMP3-202ENST00000393773 UBE2G1P62253 170 aa9.76□□□□□ -0.85
CHMP3-202ENST00000393773 RPL7L1Q6DKI1 246 aaKnown RBP9.76□□□□□ -0.85
CHMP3-202ENST00000393773 LINC00269Q8N2A0 174 aa9.76□□□□□ -0.85
CHMP3-202ENST00000393773 SPACA4Q8TDM5 124 aa9.76□□□□□ -0.85
CHMP3-202ENST00000393773 CHTF8P0CG12 524 aa9.75□□□□□ -0.85
CHMP3-202ENST00000393773 CLRN3Q8NCR9 226 aa9.75□□□□□ -0.85
CHMP3-202ENST00000393773 ALG5Q9Y673 324 aa9.75□□□□□ -0.85
CHMP3-202ENST00000393773 SNAI2O43623 268 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms