RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 NKX6-2Q9C056 277 aaPredicted RBP12.13□□□□□ -0.47
PDLIM7-205ENST00000393551 MAP1LC3B2A6NCE7 125 aa12.12□□□□□ -0.47
PDLIM7-205ENST00000393551 M0R036 132 aa12.12□□□□□ -0.47
PDLIM7-205ENST00000393551 ARMS2P0C7Q2 107 aa12.12□□□□□ -0.47
PDLIM7-205ENST00000393551 SLC51BQ86UW2 128 aa12.12□□□□□ -0.47
PDLIM7-205ENST00000393551 NTN5Q8WTR8 489 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-205ENST00000393551 MAP1LC3BQ9GZQ8 125 aa12.12□□□□□ -0.47
PDLIM7-205ENST00000393551 BOLA1Q9Y3E2 137 aa12.12□□□□□ -0.47
PDLIM7-205ENST00000393551 GRIFINA4D1Z8 144 aa12.11□□□□□ -0.47
PDLIM7-205ENST00000393551 BCL2L11O43521 198 aa12.11□□□□□ -0.47
PDLIM7-205ENST00000393551 INAFM2P0DMQ5 153 aa12.11□□□□□ -0.47
PDLIM7-205ENST00000393551 LAGE3Q14657 143 aa12.11□□□□□ -0.47
PDLIM7-205ENST00000393551 DAZ4Q86SG3 579 aaKnown RBP12.11□□□□□ -0.47
PDLIM7-205ENST00000393551 DAZ3Q9NR90 486 aaKnown RBP12.11□□□□□ -0.47
PDLIM7-205ENST00000393551 FAM30AQ9NZY2 134 aa12.11□□□□□ -0.47
PDLIM7-205ENST00000393551 ZFP30Q9Y2G7 519 aa12.11□□□□□ -0.47
PDLIM7-205ENST00000393551 ZNF674Q2M3X9 581 aa12.1□□□□□ -0.47
PDLIM7-205ENST00000393551 TRBV6-1A0A0K0K1D8 114 aa12.09□□□□□ -0.47
PDLIM7-205ENST00000393551 LTAP01374 205 aa12.09□□□□□ -0.47
PDLIM7-205ENST00000393551 FAM162BQ5T6X4 162 aa12.09□□□□□ -0.47
PDLIM7-205ENST00000393551 FRZBQ92765 325 aa12.09□□□□□ -0.47
PDLIM7-205ENST00000393551 FMC1Q96HJ9 113 aa12.09□□□□□ -0.47
PDLIM7-205ENST00000393551 A0A087WWL8 130 aa12.08□□□□□ -0.48
PDLIM7-205ENST00000393551 LINC01559Q495D7 138 aa12.08□□□□□ -0.48
PDLIM7-205ENST00000393551 STOML3Q8TAV4 291 aa12.08□□□□□ -0.48
PDLIM7-205ENST00000393551 SFRP2Q96HF1 295 aa12.08□□□□□ -0.48
PDLIM7-205ENST00000393551 DNAJC30Q96LL9 226 aa12.08□□□□□ -0.48
PDLIM7-205ENST00000393551 TMEM70Q9BUB7 260 aa12.08□□□□□ -0.48
PDLIM7-205ENST00000393551 TMSB15BA0A087X1C1 80 aa12.07□□□□□ -0.48
PDLIM7-205ENST00000393551 FAM74A4Q5TZK3 123 aa12.07□□□□□ -0.48
PDLIM7-205ENST00000393551 CST9LP1Q5W188 147 aa12.07□□□□□ -0.48
PDLIM7-205ENST00000393551 EIF5AL1Q6IS14 154 aaKnown RBP12.07□□□□□ -0.48
PDLIM7-205ENST00000393551 RHODO00212 210 aa12.06□□□□□ -0.48
PDLIM7-205ENST00000393551 TPT1P13693 172 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-205ENST00000393551 UBE2G1P62253 170 aa12.06□□□□□ -0.48
PDLIM7-205ENST00000393551 SYT8Q8NBV8 401 aa12.06□□□□□ -0.48
PDLIM7-205ENST00000393551 PHLDA3Q9Y5J5 127 aa12.06□□□□□ -0.48
PDLIM7-205ENST00000393551 M0R381 172 aa12.05□□□□□ -0.48
PDLIM7-205ENST00000393551 LECT2O14960 151 aa12.05□□□□□ -0.48
PDLIM7-205ENST00000393551 PAGE4O60829 102 aa12.05□□□□□ -0.48
PDLIM7-205ENST00000393551 TCEAL7Q9BRU2 100 aa12.05□□□□□ -0.48
PDLIM7-205ENST00000393551 TM2D2Q9BX73 214 aa12.05□□□□□ -0.48
PDLIM7-205ENST00000393551 ZNF471Q9BX82 626 aaPredicted RBP12.05□□□□□ -0.48
PDLIM7-205ENST00000393551 A0A087WWC5 75 aa12.04□□□□□ -0.48
PDLIM7-205ENST00000393551 TRAV8-3A0A0A6YYJ7 113 aa12.04□□□□□ -0.48
PDLIM7-205ENST00000393551 TEX261Q6UWH6 196 aa12.04□□□□□ -0.48
PDLIM7-205ENST00000393551 NIT1Q86X76 327 aa12.04□□□□□ -0.48
PDLIM7-205ENST00000393551 MBD3L1Q8WWY6 194 aa12.04□□□□□ -0.48
PDLIM7-205ENST00000393551 AKR1C3P42330 323 aa12.03□□□□□ -0.48
PDLIM7-205ENST00000393551 RPL19P84098 196 aaKnown RBP12.02□□□□□ -0.49
PDLIM7-205ENST00000393551 Q6ZSA8 131 aa12.02□□□□□ -0.49
PDLIM7-205ENST00000393551 ZFP82Q8N141 532 aa12.02□□□□□ -0.49
PDLIM7-205ENST00000393551 SFT2D1Q8WV19 159 aa12.02□□□□□ -0.49
PDLIM7-205ENST00000393551 BAALCQ8WXS3 180 aa12.02□□□□□ -0.49
PDLIM7-205ENST00000393551 MLST8Q9BVC4 326 aa12.02□□□□□ -0.49
PDLIM7-205ENST00000393551 A0A1B0GV50 99 aa12.01□□□□□ -0.49
PDLIM7-205ENST00000393551 SCO2A0A1W2PP80 73 aa12.01□□□□□ -0.49
PDLIM7-205ENST00000393551 SEC11BP0C7V7 166 aa12.01□□□□□ -0.49
PDLIM7-205ENST00000393551 UBE2D3P61077 147 aa12.01□□□□□ -0.49
PDLIM7-205ENST00000393551 UBE2D2P62837 147 aa12.01□□□□□ -0.49
PDLIM7-205ENST00000393551 IFITM2Q01629 132 aa12.01□□□□□ -0.49
PDLIM7-205ENST00000393551 FAM229AH3BQW9 127 aa12□□□□□ -0.49
PDLIM7-205ENST00000393551 TOR2AQ5JU69 321 aa12□□□□□ -0.49
PDLIM7-205ENST00000393551 OR10AG1Q8NH19 301 aa12□□□□□ -0.49
PDLIM7-205ENST00000393551 FAM213BQ8TBF2 198 aa12□□□□□ -0.49
PDLIM7-205ENST00000393551 KLK12Q9UKR0 248 aa12□□□□□ -0.49
PDLIM7-205ENST00000393551 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.99□□□□□ -0.49
PDLIM7-205ENST00000393551 TRBV10-1A0A0K0K1A3 114 aa11.99□□□□□ -0.49
PDLIM7-205ENST00000393551 LINC01620Q4KN68 170 aa11.99□□□□□ -0.49
PDLIM7-205ENST00000393551 OR10G8Q8NGN5 311 aa11.99□□□□□ -0.49
PDLIM7-205ENST00000393551 TRBV7-3A0A075B6L6 115 aa11.98□□□□□ -0.49
PDLIM7-205ENST00000393551 UMAD1C9J7I0 102 aa11.98□□□□□ -0.49
PDLIM7-205ENST00000393551 RAB5CP51148 216 aa11.98□□□□□ -0.49
PDLIM7-205ENST00000393551 SSBP4Q9BWG4 385 aaPredicted RBP11.98□□□□□ -0.49
PDLIM7-205ENST00000393551 RPL36AP83881 106 aaKnown RBP11.97□□□□□ -0.49
PDLIM7-205ENST00000393551 PRR27Q6MZM9 219 aa11.97□□□□□ -0.49
PDLIM7-205ENST00000393551 BAGE2Q86Y30 109 aa11.97□□□□□ -0.49
PDLIM7-205ENST00000393551 NEXN-AS1Q8NBZ9 246 aa11.97□□□□□ -0.49
PDLIM7-205ENST00000393551 RPL36ALQ969Q0 106 aaKnown RBP11.97□□□□□ -0.49
PDLIM7-205ENST00000393551 URGCP-MRPS24S4R325 110 aa11.97□□□□□ -0.49
PDLIM7-205ENST00000393551 IGKV2D-24A0A075B6R9 120 aa11.96□□□□□ -0.49
PDLIM7-205ENST00000393551 MUC21A0A0G2JKD1 596 aa11.96□□□□□ -0.49
PDLIM7-205ENST00000393551 MUC21A0A140T8X8 626 aa11.96□□□□□ -0.49
PDLIM7-205ENST00000393551 SNAI2O43623 268 aa11.96□□□□□ -0.49
PDLIM7-205ENST00000393551 S100A9P06702 114 aaKnown RBP11.96□□□□□ -0.49
PDLIM7-205ENST00000393551 CXCL1P09341 107 aa11.96□□□□□ -0.49
PDLIM7-205ENST00000393551 RAB4BP61018 213 aa11.96□□□□□ -0.49
PDLIM7-205ENST00000393551 RAB14P61106 215 aa11.96□□□□□ -0.49
PDLIM7-205ENST00000393551 ATRAIDQ6UW56 229 aa11.96□□□□□ -0.49
PDLIM7-205ENST00000393551 UBE2WQ96B02 151 aa11.96□□□□□ -0.49
PDLIM7-205ENST00000393551 COX11Q9Y6N1 276 aa11.96□□□□□ -0.49
PDLIM7-205ENST00000393551 CCL20P78556 96 aa11.95□□□□□ -0.5
PDLIM7-205ENST00000393551 CHCHD7Q9BUK0 85 aa11.95□□□□□ -0.5
PDLIM7-205ENST00000393551 A0A087WX48 190 aa11.94□□□□□ -0.5
PDLIM7-205ENST00000393551 TRBV6-8A0A0A6YYG3 113 aa11.94□□□□□ -0.5
PDLIM7-205ENST00000393551 H2AFB1P0C5Y9 115 aa11.94□□□□□ -0.5
PDLIM7-205ENST00000393551 OR5AL1P0C617 328 aa11.94□□□□□ -0.5
PDLIM7-205ENST00000393551 DERL1Q9BUN8 251 aa11.94□□□□□ -0.5
PDLIM7-205ENST00000393551 KIF25-AS1Q9Y6Z4 181 aa11.94□□□□□ -0.5
PDLIM7-205ENST00000393551 LRP1Q07954 4544 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms