RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 LY6EQ16553 131 aa11.03□□□□□ -0.64
SFXN3-202ENST00000393459 METTL26Q96S19 204 aa11.03□□□□□ -0.64
SFXN3-202ENST00000393459 FAM208BQ5VWN6 2430 aa11.02□□□□□ -0.64
SFXN3-202ENST00000393459 PRRC2AP48634 2157 aaKnown RBP11.02□□□□□ -0.64
SFXN3-202ENST00000393459 DAND5Q8N907 189 aa11.02□□□□□ -0.65
SFXN3-202ENST00000393459 LY6LH3BQJ8 138 aa11.02□□□□□ -0.65
SFXN3-202ENST00000393459 ZNF688P0C7X2 276 aa11.02□□□□□ -0.65
SFXN3-202ENST00000393459 CDSNQ15517 529 aa11.02□□□□□ -0.65
SFXN3-202ENST00000393459 CEMP1Q6PRD7 247 aaPredicted RBP11.02□□□□□ -0.65
SFXN3-202ENST00000393459 CCDC140Q96MF4 163 aa11.02□□□□□ -0.65
SFXN3-202ENST00000393459 NIPBLQ6KC79 2804 aaeCLIP11.01□□□□□ -0.65
SFXN3-202ENST00000393459 A0A0J9YY99 117 aa11.01□□□□□ -0.65
SFXN3-202ENST00000393459 SNCGO76070 127 aa11.01□□□□□ -0.65
SFXN3-202ENST00000393459 PRM2P04554 102 aa11.01□□□□□ -0.65
SFXN3-202ENST00000393459 CRYGDP07320 174 aa11.01□□□□□ -0.65
SFXN3-202ENST00000393459 SPXQ9BT56 116 aa11.01□□□□□ -0.65
SFXN3-202ENST00000393459 FBN2P35556 2912 aa11.01□□□□□ -0.65
SFXN3-202ENST00000393459 TRAV12-3A0A0B4J271 114 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 RBAKDNA6NC62 111 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 LGALS3P17931 250 aaKnown RBP11□□□□□ -0.65
SFXN3-202ENST00000393459 ORMDL2Q53FV1 153 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 C8orf31Q8N9H6 132 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 ZFP36P26651 326 aaKnown RBP11□□□□□ -0.65
SFXN3-202ENST00000393459 GAGE2BQ13066 116 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 GAGE2EQ4V326 116 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 BRD3OSQ6XYD6 125 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 ZNRF2Q8NHG8 242 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 GAGE2DQ9UEU5 116 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 CCL21O00585 134 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 TSHBP01222 138 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 CD7P09564 240 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 ASIPP42127 132 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 TAL2Q16559 108 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 TOMM6Q96B49 74 aa11□□□□□ -0.65
SFXN3-202ENST00000393459 CNFNQ9BYD5 112 aa10.99□□□□□ -0.65
SFXN3-202ENST00000393459 ZFAND3Q9H8U3 227 aa10.99□□□□□ -0.65
SFXN3-202ENST00000393459 ERG28Q9UKR5 140 aa10.99□□□□□ -0.65
SFXN3-202ENST00000393459 ZNF56Q15929 161 aa10.99□□□□□ -0.65
SFXN3-202ENST00000393459 FN1P02751 2386 aaKnown RBP10.99□□□□□ -0.65
SFXN3-202ENST00000393459 SHISA2Q6UWI4 295 aa10.98□□□□□ -0.65
SFXN3-202ENST00000393459 PIFOQ8TCI5 191 aa10.98□□□□□ -0.65
SFXN3-202ENST00000393459 DUX3Q96PT4 197 aa10.98□□□□□ -0.65
SFXN3-202ENST00000393459 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
SFXN3-202ENST00000393459 PRO1854Q9UHT4 67 aa10.98□□□□□ -0.65
SFXN3-202ENST00000393459 HERV-K104P63124 156 aa10.98□□□□□ -0.65
SFXN3-202ENST00000393459 MUSTN1Q8IVN3 82 aa10.98□□□□□ -0.65
SFXN3-202ENST00000393459 TRAV8-3A0A0A6YYJ7 113 aa10.98□□□□□ -0.65
SFXN3-202ENST00000393459 B9A039 149 aa10.98□□□□□ -0.65
SFXN3-202ENST00000393459 RS1O15537 224 aa10.98□□□□□ -0.65
SFXN3-202ENST00000393459 Q8N9W7 124 aa10.98□□□□□ -0.65
SFXN3-202ENST00000393459 ZNF625Q96I27 306 aaPredicted RBP10.98□□□□□ -0.65
SFXN3-202ENST00000393459 CCDC168Q8NDH2 2452 aa10.97□□□□□ -0.65
SFXN3-202ENST00000393459 UBE2D1P51668 147 aa10.97□□□□□ -0.65
SFXN3-202ENST00000393459 FAM159AQ6UWV7 190 aa10.97□□□□□ -0.65
SFXN3-202ENST00000393459 C10orf126Q8N4M7 172 aa10.97□□□□□ -0.65
SFXN3-202ENST00000393459 KLK9Q9UKQ9 250 aa10.97□□□□□ -0.65
SFXN3-202ENST00000393459 SDHAF1A6NFY7 115 aa10.97□□□□□ -0.65
SFXN3-202ENST00000393459 HERVK_113P61574 105 aa10.97□□□□□ -0.65
SFXN3-202ENST00000393459 OR10J6PQ8NGY7 276 aa10.97□□□□□ -0.65
SFXN3-202ENST00000393459 CLEC2BQ92478 149 aa10.97□□□□□ -0.65
SFXN3-202ENST00000393459 SLC50A1Q9BRV3 221 aa10.97□□□□□ -0.65
SFXN3-202ENST00000393459 A0A0J9YXV3 536 aa10.96□□□□□ -0.65
SFXN3-202ENST00000393459 J3QQQ9 107 aa10.96□□□□□ -0.65
SFXN3-202ENST00000393459 ACACBO00763 2458 aa10.96□□□□□ -0.65
SFXN3-202ENST00000393459 IGLV4-69A0A075B6H9 119 aa10.96□□□□□ -0.66
SFXN3-202ENST00000393459 KNCNA6PVL3 124 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 GAGE5Q13069 117 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 GAGE6Q13070 117 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 TIMD4Q96H15 378 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 IGHV3-30P01768 117 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 P0DMU3 169 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 FAM231AP0DMU4 169 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 FAM231CP0DMU5 169 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 IGHV3-30-5P0DP03 117 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 SAA4P35542 130 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 EPG5Q9HCE0 2579 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 EIF4EBP3O60516 100 aaPredicted RBP10.95□□□□□ -0.66
SFXN3-202ENST00000393459 KLRB1Q12918 225 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 Q8N1Y9 231 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 C15orf53Q8NAA6 179 aa10.95□□□□□ -0.66
SFXN3-202ENST00000393459 MYO18BQ8IUG5 2567 aa10.94□□□□□ -0.66
SFXN3-202ENST00000393459 NAV2Q8IVL1 2488 aa10.94□□□□□ -0.66
SFXN3-202ENST00000393459 COX6B1P14854 86 aa10.94□□□□□ -0.66
SFXN3-202ENST00000393459 UBE2D3P61077 147 aa10.94□□□□□ -0.66
SFXN3-202ENST00000393459 UBE2D2P62837 147 aa10.94□□□□□ -0.66
SFXN3-202ENST00000393459 HIST2H2BDQ6DRA6 164 aa10.94□□□□□ -0.66
SFXN3-202ENST00000393459 SVIPQ8NHG7 77 aa10.94□□□□□ -0.66
SFXN3-202ENST00000393459 NHLRC4P0CG21 123 aaPredicted RBP10.94□□□□□ -0.66
SFXN3-202ENST00000393459 NPBQ8NG41 125 aa10.94□□□□□ -0.66
SFXN3-202ENST00000393459 SUMO4Q6EEV6 95 aa10.93□□□□□ -0.66
SFXN3-202ENST00000393459 ZFAND2AQ8N6M9 145 aa10.93□□□□□ -0.66
SFXN3-202ENST00000393459 CHCHD5Q9BSY4 110 aa10.93□□□□□ -0.66
SFXN3-202ENST00000393459 DUX5Q96PT3 197 aa10.93□□□□□ -0.66
SFXN3-202ENST00000393459 PSMG3-AS1Q96PY0 264 aa10.93□□□□□ -0.66
SFXN3-202ENST00000393459 PF4V1P10720 104 aa10.93□□□□□ -0.66
SFXN3-202ENST00000393459 NF1P21359 2839 aa10.93□□□□□ -0.66
SFXN3-202ENST00000393459 FLNCQ14315 2725 aa10.92□□□□□ -0.66
SFXN3-202ENST00000393459 TRAV12-1A0A0B4J245 112 aa10.92□□□□□ -0.66
SFXN3-202ENST00000393459 TRAV21A0A0B4J279 112 aa10.92□□□□□ -0.66
SFXN3-202ENST00000393459 RNF223E7ERA6 249 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms