RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.37□□□□□ -0.59
SHTN1-204ENST00000392903 ANKRD29Q8N6D5 301 aa11.37□□□□□ -0.59
SHTN1-204ENST00000392903 AGPAT4-IT1Q9H0P7 198 aa11.37□□□□□ -0.59
SHTN1-204ENST00000392903 SRD5A1P18405 259 aa11.36□□□□□ -0.59
SHTN1-204ENST00000392903 SUMO2P61956 95 aaKnown RBP11.36□□□□□ -0.59
SHTN1-204ENST00000392903 KLK9Q2XQG4 91 aa11.36□□□□□ -0.59
SHTN1-204ENST00000392903 KLK9Q9UKQ9 250 aa11.36□□□□□ -0.59
SHTN1-204ENST00000392903 ABCA12Q86UK0 2595 aa11.36□□□□□ -0.59
SHTN1-204ENST00000392903 FBN2P35556 2912 aa11.36□□□□□ -0.59
SHTN1-204ENST00000392903 TRBV12-3P01733 135 aa11.36□□□□□ -0.59
SHTN1-204ENST00000392903 BLCAPP62952 87 aa11.36□□□□□ -0.59
SHTN1-204ENST00000392903 METTL26Q96S19 204 aa11.36□□□□□ -0.59
SHTN1-204ENST00000392903 M0QXV9 152 aa11.35□□□□□ -0.59
SHTN1-204ENST00000392903 Q6ZS46 218 aa11.35□□□□□ -0.59
SHTN1-204ENST00000392903 A0A0J9YY99 117 aa11.35□□□□□ -0.59
SHTN1-204ENST00000392903 AVPP01185 164 aa11.35□□□□□ -0.59
SHTN1-204ENST00000392903 IGHV3-11P01762 117 aa11.35□□□□□ -0.59
SHTN1-204ENST00000392903 MSMBP08118 114 aa11.35□□□□□ -0.59
SHTN1-204ENST00000392903 NHLRC4P0CG21 123 aaPredicted RBP11.35□□□□□ -0.59
SHTN1-204ENST00000392903 C2orf66Q6UXQ4 117 aa11.35□□□□□ -0.59
SHTN1-204ENST00000392903 KIR2DL4Q99706 377 aa11.35□□□□□ -0.59
SHTN1-204ENST00000392903 HIF1ANQ9NWT6 349 aa11.35□□□□□ -0.59
SHTN1-204ENST00000392903 PTPN13Q12923 2485 aa11.34□□□□□ -0.59
SHTN1-204ENST00000392903 CFC1BP0CG36 223 aa11.34□□□□□ -0.59
SHTN1-204ENST00000392903 CFC1P0CG37 223 aa11.34□□□□□ -0.59
SHTN1-204ENST00000392903 C10orf126Q8N4M7 172 aa11.34□□□□□ -0.59
SHTN1-204ENST00000392903 RHODO00212 210 aa11.34□□□□□ -0.59
SHTN1-204ENST00000392903 KLHL30-AS1Q8NEE0 82 aa11.34□□□□□ -0.59
SHTN1-204ENST00000392903 DOPEY2Q9Y3R5 2298 aa11.33□□□□□ -0.6
SHTN1-204ENST00000392903 EPG5Q9HCE0 2579 aa11.33□□□□□ -0.6
SHTN1-204ENST00000392903 H3BVH4 76 aa11.33□□□□□ -0.6
SHTN1-204ENST00000392903 ARL3P36405 182 aa11.33□□□□□ -0.6
SHTN1-204ENST00000392903 ASIPP42127 132 aa11.33□□□□□ -0.6
SHTN1-204ENST00000392903 C19orf54Q5BKX5 351 aa11.33□□□□□ -0.6
SHTN1-204ENST00000392903 CFAP161Q6P656 301 aa11.33□□□□□ -0.6
SHTN1-204ENST00000392903 UNQ9165/PRO28630Q6UXU0 137 aa11.33□□□□□ -0.6
SHTN1-204ENST00000392903 TRAV8-2A0A0B4J237 113 aa11.33□□□□□ -0.6
SHTN1-204ENST00000392903 B5MCH6 92 aa11.33□□□□□ -0.6
SHTN1-204ENST00000392903 IGHV3-30P01768 117 aa11.33□□□□□ -0.6
SHTN1-204ENST00000392903 IGHV3-30-5P0DP03 117 aa11.33□□□□□ -0.6
SHTN1-204ENST00000392903 MRPL53Q96EL3 112 aaKnown RBP11.32□□□□□ -0.6
SHTN1-204ENST00000392903 MXRA5Q9NR99 2828 aa11.32□□□□□ -0.6
SHTN1-204ENST00000392903 C9orf47Q6ZRZ4 202 aa11.31□□□□□ -0.6
SHTN1-204ENST00000392903 MAPK1IP1LQ8NDC0 245 aa11.31□□□□□ -0.6
SHTN1-204ENST00000392903 PRO1854Q9UHT4 67 aa11.31□□□□□ -0.6
SHTN1-204ENST00000392903 FAM223BA6NKX1 122 aa11.31□□□□□ -0.6
SHTN1-204ENST00000392903 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
SHTN1-204ENST00000392903 PF4V1P10720 104 aa11.31□□□□□ -0.6
SHTN1-204ENST00000392903 HERVK_113P61574 105 aa11.31□□□□□ -0.6
SHTN1-204ENST00000392903 PAPPA-AS1Q5QFB9 102 aa11.31□□□□□ -0.6
SHTN1-204ENST00000392903 FAM223AQ8IWN6 122 aa11.31□□□□□ -0.6
SHTN1-204ENST00000392903 SLC25A29Q8N8R3 303 aa11.31□□□□□ -0.6
SHTN1-204ENST00000392903 M0R381 172 aa11.3□□□□□ -0.6
SHTN1-204ENST00000392903 SLC25A20O43772 301 aa11.3□□□□□ -0.6
SHTN1-204ENST00000392903 CRYGDP07320 174 aa11.3□□□□□ -0.6
SHTN1-204ENST00000392903 SCGB1C2P0DMR2 95 aa11.3□□□□□ -0.6
SHTN1-204ENST00000392903 Q6ZQT7 251 aa11.3□□□□□ -0.6
SHTN1-204ENST00000392903 RPL39LQ96EH5 51 aaKnown RBP11.3□□□□□ -0.6
SHTN1-204ENST00000392903 IGLV4-69A0A075B6H9 119 aa11.3□□□□□ -0.6
SHTN1-204ENST00000392903 C11orf86A6NJI1 115 aa11.3□□□□□ -0.6
SHTN1-204ENST00000392903 IGF1P05019 195 aa11.3□□□□□ -0.6
SHTN1-204ENST00000392903 DPH3P1Q9H4G8 78 aa11.3□□□□□ -0.6
SHTN1-204ENST00000392903 A6NDX4 124 aa11.29□□□□□ -0.6
SHTN1-204ENST00000392903 IGHG2P01859 326 aa11.29□□□□□ -0.6
SHTN1-204ENST00000392903 NDUFV3P56181 108 aaKnown RBP11.29□□□□□ -0.6
SHTN1-204ENST00000392903 GAGE2BQ13066 116 aa11.29□□□□□ -0.6
SHTN1-204ENST00000392903 GAGE2EQ4V326 116 aa11.29□□□□□ -0.6
SHTN1-204ENST00000392903 C16orf92Q96LL3 132 aa11.29□□□□□ -0.6
SHTN1-204ENST00000392903 GAGE2DQ9UEU5 116 aa11.29□□□□□ -0.6
SHTN1-204ENST00000392903 U3KQE9 123 aa11.29□□□□□ -0.6
SHTN1-204ENST00000392903 B4DSR2 109 aa11.29□□□□□ -0.6
SHTN1-204ENST00000392903 IGKV3-7A0A075B6H7 116 aa11.28□□□□□ -0.6
SHTN1-204ENST00000392903 TGFAP01135 160 aa11.28□□□□□ -0.6
SHTN1-204ENST00000392903 TEX15Q9BXT5 2789 aa11.28□□□□□ -0.6
SHTN1-204ENST00000392903 SNCGO76070 127 aa11.28□□□□□ -0.6
SHTN1-204ENST00000392903 CRIP2P52943 208 aaPredicted RBP11.28□□□□□ -0.6
SHTN1-204ENST00000392903 DEFB1P60022 68 aa11.28□□□□□ -0.6
SHTN1-204ENST00000392903 RPL11P62913 178 aaKnown RBP11.28□□□□□ -0.6
SHTN1-204ENST00000392903 TMEM95Q3KNT9 176 aa11.28□□□□□ -0.6
SHTN1-204ENST00000392903 BBC3Q96PG8 261 aaPredicted RBP11.28□□□□□ -0.6
SHTN1-204ENST00000392903 UBR5O95071 2799 aaPredicted RBP11.27□□□□□ -0.6
SHTN1-204ENST00000392903 GAGE12JA6NER3 117 aa11.27□□□□□ -0.6
SHTN1-204ENST00000392903 J3KRW8 73 aa11.27□□□□□ -0.6
SHTN1-204ENST00000392903 GAGE7O76087 117 aa11.27□□□□□ -0.6
SHTN1-204ENST00000392903 DUSP14O95147 198 aaKnown RBP11.27□□□□□ -0.6
SHTN1-204ENST00000392903 GAGE12FP0CL80 117 aa11.27□□□□□ -0.6
SHTN1-204ENST00000392903 GAGE12GP0CL81 117 aa11.27□□□□□ -0.6
SHTN1-204ENST00000392903 GAGE12IP0CL82 117 aa11.27□□□□□ -0.6
SHTN1-204ENST00000392903 GAGE4Q13068 117 aa11.27□□□□□ -0.6
SHTN1-204ENST00000392903 Q6Q795 121 aa11.27□□□□□ -0.6
SHTN1-204ENST00000392903 NAV2Q8IVL1 2488 aa11.27□□□□□ -0.61
SHTN1-204ENST00000392903 C9JAW5 83 aa11.27□□□□□ -0.61
SHTN1-204ENST00000392903 PPP1R17O96001 155 aa11.27□□□□□ -0.61
SHTN1-204ENST00000392903 TSHBP01222 138 aa11.27□□□□□ -0.61
SHTN1-204ENST00000392903 C20orf173Q96LM9 149 aa11.27□□□□□ -0.61
SHTN1-204ENST00000392903 TSPEAR-AS2P59090 65 aa11.26□□□□□ -0.61
SHTN1-204ENST00000392903 PRR9Q5T870 116 aa11.26□□□□□ -0.61
SHTN1-204ENST00000392903 LENEPQ9Y5L5 61 aa11.26□□□□□ -0.61
SHTN1-204ENST00000392903 TRAV4A0A0B4J268 109 aa11.26□□□□□ -0.61
SHTN1-204ENST00000392903 C14orf178Q8N769 122 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms