RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 NOTCH1P46531 2555 aa0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 KDM6BO15054 1643 aa0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 ZNF469Q96JG9 3925 aaPredicted RBP0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 CASZ1Q86V15 1759 aa0.55□□□□□ -2.32
TRAJ40-201ENST00000390497 FAM92AA1XBS5 289 aa0.55□□□□□ -2.32
TRAJ40-201ENST00000390497 PITX3O75364 302 aa0.55□□□□□ -2.32
TRAJ40-201ENST00000390497 NDUFB6O95139 128 aa0.55□□□□□ -2.32
TRAJ40-201ENST00000390497 TFF1P04155 84 aa0.55□□□□□ -2.32
TRAJ40-201ENST00000390497 ELOF1P60002 83 aaKnown RBP0.55□□□□□ -2.32
TRAJ40-201ENST00000390497 C9orf116Q5BN46 136 aaPredicted RBP0.55□□□□□ -2.32
TRAJ40-201ENST00000390497 C1orf54Q8WWF1 131 aa0.55□□□□□ -2.32
TRAJ40-201ENST00000390497 BPESC1Q9GZL8 116 aa0.55□□□□□ -2.32
TRAJ40-201ENST00000390497 SCP2D1Q9UJQ7 156 aa0.55□□□□□ -2.32
TRAJ40-201ENST00000390497 FBN2P35556 2912 aa0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 PIGBOS1A0A0B4J2F0 54 aa0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 NPC2P61916 151 aa0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 SELENOWP63302 87 aa0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 C4orf33Q8N1A6 199 aa0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 C20orf197Q8N268 126 aa0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 COX7B2Q8TF08 81 aa0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 SDF2Q99470 211 aa0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 PRR15LQ9BU68 103 aa0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 FAM107BQ9H098 131 aa0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 LAMB1P07942 1786 aa0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 AFDNP55196 1824 aaKnown RBP0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 NAIPQ13075 1403 aa0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 ZNF518AQ6AHZ1 1483 aa0.54□□□□□ -2.32
TRAJ40-201ENST00000390497 LAMC3Q9Y6N6 1575 aa0.53□□□□□ -2.32
TRAJ40-201ENST00000390497 TRPM7Q96QT4 1865 aa0.53□□□□□ -2.32
TRAJ40-201ENST00000390497 NDUFA2O43678 99 aa0.53□□□□□ -2.32
TRAJ40-201ENST00000390497 SNCGO76070 127 aa0.53□□□□□ -2.32
TRAJ40-201ENST00000390497 CBLN1P23435 193 aa0.53□□□□□ -2.32
TRAJ40-201ENST00000390497 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.53□□□□□ -2.32
TRAJ40-201ENST00000390497 V9GYV3 84 aa0.53□□□□□ -2.32
TRAJ40-201ENST00000390497 SPAG17Q6Q759 2223 aa0.53□□□□□ -2.33
TRAJ40-201ENST00000390497 MAP2P11137 1827 aaKnown RBP0.52□□□□□ -2.33
TRAJ40-201ENST00000390497 A0A087WTM6 91 aa0.52□□□□□ -2.33
TRAJ40-201ENST00000390497 UBE2D1P51668 147 aa0.52□□□□□ -2.33
TRAJ40-201ENST00000390497 C12orf73Q69YU5 71 aa0.52□□□□□ -2.33
TRAJ40-201ENST00000390497 ZNF818PQ6ZRF7 136 aa0.52□□□□□ -2.33
TRAJ40-201ENST00000390497 SMIM11BQ8TCY0 68 aa0.52□□□□□ -2.33
TRAJ40-201ENST00000390497 PDCD10Q9BUL8 212 aa0.52□□□□□ -2.33
TRAJ40-201ENST00000390497 SNRNP25Q9BV90 132 aaKnown RBP0.52□□□□□ -2.33
TRAJ40-201ENST00000390497 LINC00470Q9BZP3 86 aa0.52□□□□□ -2.33
TRAJ40-201ENST00000390497 CFTRP13569 1480 aa0.52□□□□□ -2.33
TRAJ40-201ENST00000390497 LRRC37A3O60309 1634 aa0.52□□□□□ -2.33
TRAJ40-201ENST00000390497 TRBV7-1A0A0A6YYK4 115 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 TRBV10-3A0A0K0K1G6 114 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 FAM25AB3EWG3 89 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 FAM25CB3EWG5 89 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 FAM25GB3EWG6 89 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 K7EP13 123 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 APOC4-APOC2K7ER74 178 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 UNC13BO14795 1591 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 APODP05090 189 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 KRTAP5-10Q6L8G5 202 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 BCL9LQ86UU0 1499 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 C10orf82Q8WW14 230 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 PXDNQ92626 1479 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 IFT140Q96RY7 1462 aa0.51□□□□□ -2.33
TRAJ40-201ENST00000390497 CDK5RAP2Q96SN8 1893 aa0.5□□□□□ -2.33
TRAJ40-201ENST00000390497 LOC285556D6RIA3 1793 aa0.5□□□□□ -2.33
TRAJ40-201ENST00000390497 DPH3Q96FX2 82 aa0.5□□□□□ -2.33
TRAJ40-201ENST00000390497 RERGLQ9H628 205 aa0.5□□□□□ -2.33
TRAJ40-201ENST00000390497 KIF13AQ9H1H9 1805 aa0.5□□□□□ -2.33
TRAJ40-201ENST00000390497 EFCAB10A6NFE3 127 aa0.49□□□□□ -2.33
TRAJ40-201ENST00000390497 EDDM3BP56851 147 aa0.49□□□□□ -2.33
TRAJ40-201ENST00000390497 UBE2G1P62253 170 aa0.49□□□□□ -2.33
TRAJ40-201ENST00000390497 BTG2P78543 158 aa0.49□□□□□ -2.33
TRAJ40-201ENST00000390497 CCL8P80075 99 aa0.49□□□□□ -2.33
TRAJ40-201ENST00000390497 RBBP6Q7Z6E9 1792 aaKnown RBP0.49□□□□□ -2.33
TRAJ40-201ENST00000390497 TNS1Q9HBL0 1735 aaKnown RBP0.49□□□□□ -2.33
TRAJ40-201ENST00000390497 NRXN2Q9P2S2 1712 aa0.49□□□□□ -2.33
TRAJ40-201ENST00000390497 CASKIN1Q8WXD9 1431 aa0.48□□□□□ -2.33
TRAJ40-201ENST00000390497 IBTKQ9P2D0 1353 aaPredicted RBP0.48□□□□□ -2.33
TRAJ40-201ENST00000390497 GVQW2A0A096LPI5 108 aaPredicted RBP0.48□□□□□ -2.33
TRAJ40-201ENST00000390497 ACYP2P14621 99 aa0.48□□□□□ -2.33
TRAJ40-201ENST00000390497 Q6AWC8 147 aa0.48□□□□□ -2.33
TRAJ40-201ENST00000390497 VMO1Q7Z5L0 202 aa0.48□□□□□ -2.33
TRAJ40-201ENST00000390497 NAA60Q9H7X0 242 aa0.48□□□□□ -2.33
TRAJ40-201ENST00000390497 ASH1LQ9NR48 2969 aaKnown RBP0.48□□□□□ -2.33
TRAJ40-201ENST00000390497 AKAP11Q9UKA4 1901 aa0.47□□□□□ -2.33
TRAJ40-201ENST00000390497 PRH1P02810 166 aa0.47□□□□□ -2.33
TRAJ40-201ENST00000390497 SMIM6P0DI80 62 aa0.47□□□□□ -2.33
TRAJ40-201ENST00000390497 FGF7P21781 194 aa0.47□□□□□ -2.33
TRAJ40-201ENST00000390497 SPTSSBQ8NFR3 76 aa0.47□□□□□ -2.33
TRAJ40-201ENST00000390497 Q96NJ1 140 aa0.47□□□□□ -2.33
TRAJ40-201ENST00000390497 SEC11CQ9BY50 192 aa0.47□□□□□ -2.33
TRAJ40-201ENST00000390497 PROK2Q9HC23 129 aa0.47□□□□□ -2.33
TRAJ40-201ENST00000390497 SERP1Q9Y6X1 66 aa0.47□□□□□ -2.33
TRAJ40-201ENST00000390497 ESPL1Q14674 2120 aa0.47□□□□□ -2.33
TRAJ40-201ENST00000390497 ZDBF2Q9HCK1 2354 aa0.47□□□□□ -2.33
TRAJ40-201ENST00000390497 MBD5Q9P267 1494 aa0.47□□□□□ -2.33
TRAJ40-201ENST00000390497 TANC1Q9C0D5 1861 aa0.46□□□□□ -2.34
TRAJ40-201ENST00000390497 SPAARA0A1B0GVQ0 90 aa0.46□□□□□ -2.34
TRAJ40-201ENST00000390497 TMEM14DPA8MWL7 114 aa0.46□□□□□ -2.34
TRAJ40-201ENST00000390497 GNG7O60262 68 aa0.46□□□□□ -2.34
TRAJ40-201ENST00000390497 S100A7L2Q5SY68 101 aa0.46□□□□□ -2.34
TRAJ40-201ENST00000390497 SMR3AQ99954 134 aa0.46□□□□□ -2.34
TRAJ40-201ENST00000390497 AGPAT4-IT1Q9H0P7 198 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms