RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 GTF3C1Q12789 2109 aa10.83□□□□□ -0.68
SNPH-201ENST00000381867 K7EIM0 57 aa10.83□□□□□ -0.68
SNPH-201ENST00000381867 CCL24O00175 119 aa10.83□□□□□ -0.68
SNPH-201ENST00000381867 BAALCQ8WXS3 180 aa10.83□□□□□ -0.68
SNPH-201ENST00000381867 H3BQ85 93 aa10.82□□□□□ -0.68
SNPH-201ENST00000381867 OPRPNQ99935 248 aaPredicted RBP10.82□□□□□ -0.68
SNPH-201ENST00000381867 IGKV1-17P01599 117 aa10.82□□□□□ -0.68
SNPH-201ENST00000381867 COX7B2Q8TF08 81 aa10.82□□□□□ -0.68
SNPH-201ENST00000381867 RNF152Q8N8N0 203 aa10.82□□□□□ -0.68
SNPH-201ENST00000381867 KMT2EQ8IZD2 1858 aa10.81□□□□□ -0.68
SNPH-201ENST00000381867 IGHV4-30-2A0A087WSY4 118 aa10.81□□□□□ -0.68
SNPH-201ENST00000381867 EP400Q96L91 3159 aa10.81□□□□□ -0.68
SNPH-201ENST00000381867 TRAV26-1A0A087WT03 109 aa10.81□□□□□ -0.68
SNPH-201ENST00000381867 LGALS9O00182 355 aa10.81□□□□□ -0.68
SNPH-201ENST00000381867 IGLV11-55A0A075B6I3 123 aa10.8□□□□□ -0.68
SNPH-201ENST00000381867 TIMM17AQ99595 171 aa10.8□□□□□ -0.68
SNPH-201ENST00000381867 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
SNPH-201ENST00000381867 C11orf86A6NJI1 115 aa10.8□□□□□ -0.68
SNPH-201ENST00000381867 CTRLP40313 264 aa10.8□□□□□ -0.68
SNPH-201ENST00000381867 WFDC9Q8NEX5 89 aa10.8□□□□□ -0.68
SNPH-201ENST00000381867 JMJD7-PLA2G4BH0Y9G9 81 aa10.8□□□□□ -0.68
SNPH-201ENST00000381867 K7EQD1 137 aa10.8□□□□□ -0.68
SNPH-201ENST00000381867 ODF1Q14990 250 aa10.8□□□□□ -0.68
SNPH-201ENST00000381867 HIST2H2BCQ6DN03 193 aa10.8□□□□□ -0.68
SNPH-201ENST00000381867 Q6ZQT7 251 aa10.8□□□□□ -0.68
SNPH-201ENST00000381867 OTOGLQ3ZCN5 2332 aa10.8□□□□□ -0.68
SNPH-201ENST00000381867 MP68P56378 58 aa10.8□□□□□ -0.68
SNPH-201ENST00000381867 DEFB136Q30KP8 78 aa10.79□□□□□ -0.68
SNPH-201ENST00000381867 VSIG2Q96IQ7 327 aa10.79□□□□□ -0.68
SNPH-201ENST00000381867 DAZ2Q13117 558 aaKnown RBP10.79□□□□□ -0.68
SNPH-201ENST00000381867 DAZ4Q86SG3 579 aaKnown RBP10.79□□□□□ -0.68
SNPH-201ENST00000381867 DAZ3Q9NR90 486 aaKnown RBP10.79□□□□□ -0.68
SNPH-201ENST00000381867 C9orf66Q5T8R8 295 aa10.79□□□□□ -0.68
SNPH-201ENST00000381867 PIFOQ8TCI5 191 aa10.79□□□□□ -0.68
SNPH-201ENST00000381867 IGHV4-4A0A075B6R2 117 aa10.79□□□□□ -0.68
SNPH-201ENST00000381867 ETDCA0A1B0GVM5 59 aa10.79□□□□□ -0.68
SNPH-201ENST00000381867 RPL39P62891 51 aaKnown RBP10.79□□□□□ -0.68
SNPH-201ENST00000381867 COL5A1P20908 1838 aaPredicted RBP10.78□□□□□ -0.68
SNPH-201ENST00000381867 IGKV2D-24A0A075B6R9 120 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 A0A0J9YY99 117 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 TRBV6-1A0A0K0K1D8 114 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 TMEM89A2RUT3 159 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 CRYGBP07316 175 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 UBE2BP63146 152 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 NRGNQ92686 78 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 CTSGP08311 255 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 C16orf54Q6UWD8 224 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 IGKV1OR2-108A0A075B7D4 117 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 BUB3O43684 328 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 MED14OSP0DP75 135 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 NREPQ16612 68 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 NOTCH3Q9UM47 2321 aa10.78□□□□□ -0.68
SNPH-201ENST00000381867 IGHV7-81A0A0B4J1V7 117 aa10.77□□□□□ -0.68
SNPH-201ENST00000381867 CLEC2BQ92478 149 aa10.77□□□□□ -0.68
SNPH-201ENST00000381867 WI2-2373I1.2A0A1W2PRP0 233 aa10.77□□□□□ -0.68
SNPH-201ENST00000381867 ATP5G1P05496 136 aa10.77□□□□□ -0.68
SNPH-201ENST00000381867 TMEM61Q8N0U2 210 aa10.77□□□□□ -0.68
SNPH-201ENST00000381867 DAND5Q8N907 189 aa10.77□□□□□ -0.68
SNPH-201ENST00000381867 LOXL1Q08397 574 aaPredicted RBP10.77□□□□□ -0.69
SNPH-201ENST00000381867 IGHV4-38-2P0DP08 117 aa10.77□□□□□ -0.69
SNPH-201ENST00000381867 COX7A2LO14548 114 aa10.76□□□□□ -0.69
SNPH-201ENST00000381867 FRMD6-AS1P0C7T7 363 aa10.76□□□□□ -0.69
SNPH-201ENST00000381867 C9orf47Q6ZRZ4 202 aa10.76□□□□□ -0.69
SNPH-201ENST00000381867 LECT2O14960 151 aa10.76□□□□□ -0.69
SNPH-201ENST00000381867 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.76□□□□□ -0.69
SNPH-201ENST00000381867 IGHV4-28A0A0C4DH34 117 aa10.76□□□□□ -0.69
SNPH-201ENST00000381867 SPRNQ5BIV9 151 aa10.76□□□□□ -0.69
SNPH-201ENST00000381867 C16orf74Q96GX8 76 aa10.76□□□□□ -0.69
SNPH-201ENST00000381867 C2orf70A6NJV1 201 aa10.75□□□□□ -0.69
SNPH-201ENST00000381867 IGLV2-23P01705 113 aa10.75□□□□□ -0.69
SNPH-201ENST00000381867 CAMK2N2Q96S95 79 aa10.75□□□□□ -0.69
SNPH-201ENST00000381867 EML6Q6ZMW3 1958 aa10.75□□□□□ -0.69
SNPH-201ENST00000381867 MRPL23Q16540 153 aaKnown RBP10.75□□□□□ -0.69
SNPH-201ENST00000381867 SPATA12Q7Z6I5 190 aa10.75□□□□□ -0.69
SNPH-201ENST00000381867 RITA1Q96K30 269 aa10.75□□□□□ -0.69
SNPH-201ENST00000381867 PTH2Q96A98 100 aa10.75□□□□□ -0.69
SNPH-201ENST00000381867 PCNX1Q96RV3 2341 aa10.75□□□□□ -0.69
SNPH-201ENST00000381867 PRAC2D3DTV9 90 aa10.74□□□□□ -0.69
SNPH-201ENST00000381867 NDUFA11Q86Y39 141 aa10.74□□□□□ -0.69
SNPH-201ENST00000381867 C19orf71A6NCJ1 209 aa10.74□□□□□ -0.69
SNPH-201ENST00000381867 CHKB-CPT1BH3BT56 60 aa10.74□□□□□ -0.69
SNPH-201ENST00000381867 LINC00643Q86TS7 51 aa10.74□□□□□ -0.69
SNPH-201ENST00000381867 SLURP1P55000 103 aa10.74□□□□□ -0.69
SNPH-201ENST00000381867 C11orf1Q9H5F2 150 aa10.74□□□□□ -0.69
SNPH-201ENST00000381867 AJUBAQ96IF1 538 aa10.74□□□□□ -0.69
SNPH-201ENST00000381867 Q9HAA7 133 aa10.74□□□□□ -0.69
SNPH-201ENST00000381867 GYPEP15421 78 aa10.73□□□□□ -0.69
SNPH-201ENST00000381867 RPL18AQ02543 176 aaKnown RBP10.73□□□□□ -0.69
SNPH-201ENST00000381867 APRG1Q8IVJ8 170 aa10.73□□□□□ -0.69
SNPH-201ENST00000381867 IGLV1-47P01700 117 aa10.73□□□□□ -0.69
SNPH-201ENST00000381867 Q6ZUT4 128 aa10.73□□□□□ -0.69
SNPH-201ENST00000381867 LRP4O75096 1905 aa10.73□□□□□ -0.69
SNPH-201ENST00000381867 IGHV1-58A0A0C4DH39 117 aa10.73□□□□□ -0.69
SNPH-201ENST00000381867 PRB2P02812 416 aaPredicted RBP10.73□□□□□ -0.69
SNPH-201ENST00000381867 SIRPDQ9H106 197 aa10.73□□□□□ -0.69
SNPH-201ENST00000381867 CREBBPQ92793 2442 aa10.73□□□□□ -0.69
SNPH-201ENST00000381867 Q8N1Y9 231 aa10.72□□□□□ -0.69
SNPH-201ENST00000381867 LINC00574Q9H8X3 128 aa10.72□□□□□ -0.69
SNPH-201ENST00000381867 NDUFB1O75438 58 aa10.72□□□□□ -0.69
SNPH-201ENST00000381867 TCL1BO95988 128 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms