RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 C9orf47Q6ZRZ4 202 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 PRIMA1Q86XR5 153 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 NRGNQ92686 78 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 LGALS9O00182 355 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 APOC4P55056 127 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 RCHY1Q96PM5 261 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 PINLYPA6NC86 204 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 MBD3L4A6NDZ8 208 aaPredicted RBP3.86□□□□□ -1.79
PTPRD-203ENST00000381196 MBD3L3A6NE82 208 aaPredicted RBP3.86□□□□□ -1.79
PTPRD-203ENST00000381196 MBD3L5A6NJ08 208 aaPredicted RBP3.86□□□□□ -1.79
PTPRD-203ENST00000381196 TMEM256-PLSCR3K7ERE1 68 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 CRLF1O75462 422 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 PRB3Q04118 309 aaPredicted RBP3.86□□□□□ -1.79
PTPRD-203ENST00000381196 MBD3L2Q8NHZ7 208 aaPredicted RBP3.86□□□□□ -1.79
PTPRD-203ENST00000381196 CCDC140Q96MF4 163 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 LINC00527Q9UJ94 153 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 FGF6P10767 208 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 PRR31Q5SQ13 230 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 IGKV1D-8A0A087WSZ0 117 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 FUSP35637 526 aaKnown RBP eCLIP3.86□□□□□ -1.79
PTPRD-203ENST00000381196 SMIM26A0A096LP01 95 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 FAM236DA0A1B0GTK5 79 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 FAM236CP0DP71 79 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 CD24P25063 80 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 IGFL3Q6UXB1 125 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 ZNF134P52741 427 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 C5orf24Q7Z6I8 188 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 SLC25A29Q8N8R3 303 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 LOC107984640A0A0U1RRK4 108 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 B5MCH6 92 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 HAMPP81172 84 aa3.86□□□□□ -1.79
PTPRD-203ENST00000381196 NOTCH1P46531 2555 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 STAB2Q8WWQ8 2551 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 K7EN84 100 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 IGHV3-48P01763 117 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 SPRY4Q9C004 299 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 COX7A2LO14548 114 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 DAD1P61803 113 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 PLA2G2CQ5R387 149 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 ZFP2Q6ZN57 461 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 BAALCQ8WXS3 180 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 F8WDY8 70 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 TRGV1A0A0A0MS02 117 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 C1orf43Q9BWL3 253 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 PYGO1Q9Y3Y4 419 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 IGKV1-12A0A0C4DH73 117 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 IGKV1D-12P01611 117 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 VPREB1P12018 145 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 FAM236AA0A1B0GUQ0 79 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 FAM236BA0A1B0GV22 79 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 TGFBR3LH3BV60 316 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 NDUFA4O00483 81 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 MRGPRG-AS1Q2M3A8 158 aa3.85□□□□□ -1.79
PTPRD-203ENST00000381196 C5orf63A6NC05 138 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 F5H768 121 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 C15orf32Q32M92 178 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 GGNQ86UU5 652 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 TRAV4A0A0B4J268 109 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 TMEM178BH3BS89 294 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 DEFB130BP0DP73 79 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 DEFB130AP0DP74 79 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 UBE2D3P61077 147 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 UBE2D2P62837 147 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 MIAQ16674 131 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 MGAM2Q2M2H8 2515 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 ERC2-IT1O76042 136 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 PIP4P1Q86T03 277 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 WFDC9Q8NEX5 89 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 DMBT1Q9UGM3 2413 aaPredicted RBP3.84□□□□□ -1.79
PTPRD-203ENST00000381196 ZNF876PQ49A33 203 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 DAZ1Q9NQZ3 744 aaKnown RBP3.84□□□□□ -1.79
PTPRD-203ENST00000381196 NDUFA12Q9UI09 145 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 C15orf65H3BRN8 121 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 NRACQ8N912 160 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 TINCRA0A1B0GVN0 87 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 DEFB113Q30KQ7 82 aa3.84□□□□□ -1.79
PTPRD-203ENST00000381196 TRAV25A0A0B4J276 109 aa3.84□□□□□ -1.8
PTPRD-203ENST00000381196 PMS2P5A8MQ11 134 aa3.84□□□□□ -1.8
PTPRD-203ENST00000381196 NPBQ8NG41 125 aa3.84□□□□□ -1.8
PTPRD-203ENST00000381196 IGHV1-8P0DP01 117 aa3.84□□□□□ -1.8
PTPRD-203ENST00000381196 IL17DQ8TAD2 202 aa3.84□□□□□ -1.8
PTPRD-203ENST00000381196 C1orf159Q96HA4 380 aa3.84□□□□□ -1.8
PTPRD-203ENST00000381196 ZNF625Q96I27 306 aaPredicted RBP3.84□□□□□ -1.8
PTPRD-203ENST00000381196 PRSS29PA6NIE9 313 aa3.83□□□□□ -1.8
PTPRD-203ENST00000381196 CRYGAP11844 174 aa3.83□□□□□ -1.8
PTPRD-203ENST00000381196 GATA2P23769 480 aaPredicted RBP3.83□□□□□ -1.8
PTPRD-203ENST00000381196 DAZ2Q13117 558 aaKnown RBP3.83□□□□□ -1.8
PTPRD-203ENST00000381196 DAZ4Q86SG3 579 aaKnown RBP3.83□□□□□ -1.8
PTPRD-203ENST00000381196 DAZ3Q9NR90 486 aaKnown RBP3.83□□□□□ -1.8
PTPRD-203ENST00000381196 ZNF580Q9UK33 172 aa3.83□□□□□ -1.8
PTPRD-203ENST00000381196 BAHCC1Q9P281 2608 aa3.83□□□□□ -1.8
PTPRD-203ENST00000381196 IGKV1-6A0A0C4DH72 117 aa3.83□□□□□ -1.8
PTPRD-203ENST00000381196 A0A0U1RRA0 63 aa3.83□□□□□ -1.8
PTPRD-203ENST00000381196 RPL18AQ02543 176 aaKnown RBP3.83□□□□□ -1.8
PTPRD-203ENST00000381196 ARMS2P0C7Q2 107 aa3.83□□□□□ -1.8
PTPRD-203ENST00000381196 MRPL35Q9NZE8 188 aaKnown RBP3.83□□□□□ -1.8
PTPRD-203ENST00000381196 SAA4P35542 130 aa3.83□□□□□ -1.8
PTPRD-203ENST00000381196 BRK1Q8WUW1 75 aa3.83□□□□□ -1.8
PTPRD-203ENST00000381196 TRAV12-2A0A075B6T6 113 aa3.83□□□□□ -1.8
PTPRD-203ENST00000381196 PRR15LQ9BU68 103 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms