RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 UBE2DNLQ8IWF7 75 aa13.58□□□□□ -0.24
GTF3A-201ENST00000381140 RYR2Q92736 4967 aa13.57□□□□□ -0.24
GTF3A-201ENST00000381140 TRGV4A0A0C4DH28 118 aa13.57□□□□□ -0.24
GTF3A-201ENST00000381140 P0DMU3 169 aa13.57□□□□□ -0.24
GTF3A-201ENST00000381140 FAM231AP0DMU4 169 aa13.57□□□□□ -0.24
GTF3A-201ENST00000381140 FAM231CP0DMU5 169 aa13.57□□□□□ -0.24
GTF3A-201ENST00000381140 RAB5AP20339 215 aa13.57□□□□□ -0.24
GTF3A-201ENST00000381140 CTRLP40313 264 aa13.57□□□□□ -0.24
GTF3A-201ENST00000381140 DNLZQ5SXM8 178 aa13.57□□□□□ -0.24
GTF3A-201ENST00000381140 ATP5L2Q7Z4Y8 100 aa13.57□□□□□ -0.24
GTF3A-201ENST00000381140 OR4C5Q8NGB2 326 aa13.57□□□□□ -0.24
GTF3A-201ENST00000381140 ZNF479Q96JC4 524 aa13.57□□□□□ -0.24
GTF3A-201ENST00000381140 FER1L6-AS1Q8NA97 138 aa13.56□□□□□ -0.24
GTF3A-201ENST00000381140 TRAV4A0A0B4J268 109 aa13.55□□□□□ -0.24
GTF3A-201ENST00000381140 ARMS2P0C7Q2 107 aa13.55□□□□□ -0.24
GTF3A-201ENST00000381140 MED14OSP0DP75 135 aa13.55□□□□□ -0.24
GTF3A-201ENST00000381140 RASL11AQ6T310 242 aa13.55□□□□□ -0.24
GTF3A-201ENST00000381140 POM121L12Q8N7R1 296 aa13.55□□□□□ -0.24
GTF3A-201ENST00000381140 PGLYRP4Q96LB8 373 aa13.55□□□□□ -0.24
GTF3A-201ENST00000381140 RYR3Q15413 4870 aa13.54□□□□□ -0.24
GTF3A-201ENST00000381140 PAX4O43316 350 aa13.54□□□□□ -0.24
GTF3A-201ENST00000381140 SNAI2O43623 268 aa13.54□□□□□ -0.24
GTF3A-201ENST00000381140 FHL2Q14192 279 aa13.54□□□□□ -0.24
GTF3A-201ENST00000381140 COX19Q49B96 90 aa13.54□□□□□ -0.24
GTF3A-201ENST00000381140 SSBP4Q9BWG4 385 aaPredicted RBP13.54□□□□□ -0.24
GTF3A-201ENST00000381140 CNFNQ9BYD5 112 aa13.54□□□□□ -0.24
GTF3A-201ENST00000381140 A0A1B0GXF2 115 aa13.53□□□□□ -0.24
GTF3A-201ENST00000381140 F2Z2F3 143 aa13.53□□□□□ -0.24
GTF3A-201ENST00000381140 OR5AL1P0C617 328 aa13.53□□□□□ -0.24
GTF3A-201ENST00000381140 LYZL1Q6UWQ5 148 aa13.53□□□□□ -0.24
GTF3A-201ENST00000381140 VSIG2Q96IQ7 327 aa13.53□□□□□ -0.24
GTF3A-201ENST00000381140 HHLA3Q9XRX5 114 aa13.53□□□□□ -0.24
GTF3A-201ENST00000381140 IGHV3-73A0A0B4J1V6 119 aa13.52□□□□□ -0.25
GTF3A-201ENST00000381140 A0A1B0GUT8 65 aa13.52□□□□□ -0.25
GTF3A-201ENST00000381140 MRPL54Q6P161 138 aaKnown RBP13.52□□□□□ -0.25
GTF3A-201ENST00000381140 BORCS7Q96B45 105 aa13.52□□□□□ -0.25
GTF3A-201ENST00000381140 PRO0255Q9UI72 69 aa13.52□□□□□ -0.25
GTF3A-201ENST00000381140 HYDINQ4G0P3 5121 aa13.52□□□□□ -0.25
GTF3A-201ENST00000381140 A0A1B0GW15 77 aa13.51□□□□□ -0.25
GTF3A-201ENST00000381140 CRYBA4P53673 196 aa13.51□□□□□ -0.25
GTF3A-201ENST00000381140 RIGQ13278 110 aa13.51□□□□□ -0.25
GTF3A-201ENST00000381140 WDR73Q6P4I2 378 aa13.51□□□□□ -0.25
GTF3A-201ENST00000381140 TPPP3Q9BW30 176 aa13.51□□□□□ -0.25
GTF3A-201ENST00000381140 SCRT2Q9NQ03 307 aa13.51□□□□□ -0.25
GTF3A-201ENST00000381140 PHLDA3Q9Y5J5 127 aa13.51□□□□□ -0.25
GTF3A-201ENST00000381140 RS1O15537 224 aa13.5□□□□□ -0.25
GTF3A-201ENST00000381140 RPS10P46783 165 aaKnown RBP13.5□□□□□ -0.25
GTF3A-201ENST00000381140 HBBP68871 147 aa13.5□□□□□ -0.25
GTF3A-201ENST00000381140 SLAQ13239 276 aa13.5□□□□□ -0.25
GTF3A-201ENST00000381140 CFAP126Q5VTH2 177 aa13.5□□□□□ -0.25
GTF3A-201ENST00000381140 SYT8Q8NBV8 401 aa13.5□□□□□ -0.25
GTF3A-201ENST00000381140 H3BNG1 76 aa13.49□□□□□ -0.25
GTF3A-201ENST00000381140 M0R381 172 aa13.49□□□□□ -0.25
GTF3A-201ENST00000381140 PTH2Q96A98 100 aa13.49□□□□□ -0.25
GTF3A-201ENST00000381140 GNB1LQ9BYB4 327 aa13.49□□□□□ -0.25
GTF3A-201ENST00000381140 VPS13DQ5THJ4 4388 aa13.48□□□□□ -0.25
GTF3A-201ENST00000381140 MT-ND6P03923 174 aa13.48□□□□□ -0.25
GTF3A-201ENST00000381140 S100A8P05109 93 aa13.48□□□□□ -0.25
GTF3A-201ENST00000381140 CACNG7P62955 275 aa13.48□□□□□ -0.25
GTF3A-201ENST00000381140 DMRTA1Q5VZB9 504 aa13.48□□□□□ -0.25
GTF3A-201ENST00000381140 GATD1Q8NB37 220 aa13.48□□□□□ -0.25
GTF3A-201ENST00000381140 JPT2Q9H910 190 aa13.48□□□□□ -0.25
GTF3A-201ENST00000381140 ICOSQ9Y6W8 199 aa13.48□□□□□ -0.25
GTF3A-201ENST00000381140 A0A096LPF7 62 aa13.47□□□□□ -0.25
GTF3A-201ENST00000381140 MUC21A0A0G2JKD1 596 aa13.47□□□□□ -0.25
GTF3A-201ENST00000381140 MUC21A0A140T8X8 626 aa13.47□□□□□ -0.25
GTF3A-201ENST00000381140 CCL18P55774 89 aa13.47□□□□□ -0.25
GTF3A-201ENST00000381140 SSTP61278 116 aa13.47□□□□□ -0.25
GTF3A-201ENST00000381140 TMEM136Q6ZRR5 245 aa13.47□□□□□ -0.25
GTF3A-201ENST00000381140 A8MWV9 139 aa13.46□□□□□ -0.25
GTF3A-201ENST00000381140 HLA-DQA1P01909 254 aa13.46□□□□□ -0.25
GTF3A-201ENST00000381140 GYPEP15421 78 aa13.46□□□□□ -0.25
GTF3A-201ENST00000381140 ZFP82Q8N141 532 aa13.46□□□□□ -0.25
GTF3A-201ENST00000381140 OR10AG1Q8NH19 301 aa13.46□□□□□ -0.25
GTF3A-201ENST00000381140 IGLV2-18A0A075B6J9 118 aa13.45□□□□□ -0.26
GTF3A-201ENST00000381140 NXPH4O95158 308 aa13.45□□□□□ -0.26
GTF3A-201ENST00000381140 GATA1P15976 413 aaPredicted RBP13.45□□□□□ -0.26
GTF3A-201ENST00000381140 LOC100131303A0A0U1RQF7 123 aa13.45□□□□□ -0.26
GTF3A-201ENST00000381140 CAMPP49913 170 aa13.45□□□□□ -0.26
GTF3A-201ENST00000381140 FAM74A4Q5TZK3 123 aa13.45□□□□□ -0.26
GTF3A-201ENST00000381140 SAMD10Q9BYL1 202 aa13.45□□□□□ -0.26
GTF3A-201ENST00000381140 LINC00588Q9Y4M8 146 aa13.45□□□□□ -0.26
GTF3A-201ENST00000381140 TRAPPC1Q9Y5R8 145 aa13.45□□□□□ -0.26
GTF3A-201ENST00000381140 A0A087WWL8 130 aa13.44□□□□□ -0.26
GTF3A-201ENST00000381140 M0R2N4 97 aa13.44□□□□□ -0.26
GTF3A-201ENST00000381140 PHOX2AO14813 284 aa13.44□□□□□ -0.26
GTF3A-201ENST00000381140 TRGC2P03986 189 aa13.44□□□□□ -0.26
GTF3A-201ENST00000381140 NTF3P20783 257 aa13.44□□□□□ -0.26
GTF3A-201ENST00000381140 MRPL23Q16540 153 aaKnown RBP13.44□□□□□ -0.26
GTF3A-201ENST00000381140 ESRGQ1W209 222 aa13.44□□□□□ -0.26
GTF3A-201ENST00000381140 PIK3CD-AS1Q5SR53 167 aa13.44□□□□□ -0.26
GTF3A-201ENST00000381140 SPANXN1Q5VSR9 72 aa13.44□□□□□ -0.26
GTF3A-201ENST00000381140 C1orf196B1AJZ1 125 aa13.43□□□□□ -0.26
GTF3A-201ENST00000381140 CIDEAO60543 219 aa13.43□□□□□ -0.26
GTF3A-201ENST00000381140 SRIP30626 198 aa13.43□□□□□ -0.26
GTF3A-201ENST00000381140 RAB4BP61018 213 aa13.43□□□□□ -0.26
GTF3A-201ENST00000381140 TWIST1Q15672 202 aa13.43□□□□□ -0.26
GTF3A-201ENST00000381140 SLC25A29Q8N8R3 303 aa13.43□□□□□ -0.26
GTF3A-201ENST00000381140 MRPL18Q9H0U6 180 aaKnown RBP13.43□□□□□ -0.26
GTF3A-201ENST00000381140 K7EQD1 137 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms