RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 C4orf3Q8WVX3 66 aa9.38□□□□□ -0.91
PUDP-201ENST00000381077 ASH1LQ9NR48 2969 aaKnown RBP9.38□□□□□ -0.91
PUDP-201ENST00000381077 SDHAF1A6NFY7 115 aa9.38□□□□□ -0.91
PUDP-201ENST00000381077 H3BUT2 72 aa9.38□□□□□ -0.91
PUDP-201ENST00000381077 CRYGDP07320 174 aa9.38□□□□□ -0.91
PUDP-201ENST00000381077 FABP2P12104 132 aa9.38□□□□□ -0.91
PUDP-201ENST00000381077 TCTEX1D4Q5JR98 221 aa9.38□□□□□ -0.91
PUDP-201ENST00000381077 CST9LQ9H4G1 147 aa9.38□□□□□ -0.91
PUDP-201ENST00000381077 M0QY20 66 aa9.37□□□□□ -0.91
PUDP-201ENST00000381077 FXYD2P54710 66 aa9.37□□□□□ -0.91
PUDP-201ENST00000381077 TCTAP57738 103 aa9.37□□□□□ -0.91
PUDP-201ENST00000381077 SPAG8Q99932 426 aaPredicted RBP9.37□□□□□ -0.91
PUDP-201ENST00000381077 LINC00467Q9BRT7 94 aa9.37□□□□□ -0.91
PUDP-201ENST00000381077 TP53TG1Q9Y2A0 90 aa9.37□□□□□ -0.91
PUDP-201ENST00000381077 F5H697 171 aa9.37□□□□□ -0.91
PUDP-201ENST00000381077 CLUHP3Q96NS8 147 aa9.37□□□□□ -0.91
PUDP-201ENST00000381077 CR1P17927 2039 aa9.37□□□□□ -0.91
PUDP-201ENST00000381077 A0A1B0GWB2 263 aa9.36□□□□□ -0.91
PUDP-201ENST00000381077 SPRY2O43597 315 aa9.36□□□□□ -0.91
PUDP-201ENST00000381077 SPINK13Q1W4C9 94 aa9.36□□□□□ -0.91
PUDP-201ENST00000381077 MAPKAPK5-AS1Q8N8E1 139 aa9.36□□□□□ -0.91
PUDP-201ENST00000381077 PHLDA1Q8WV24 401 aaPredicted RBP9.36□□□□□ -0.91
PUDP-201ENST00000381077 MDFICQ9P1T7 246 aa9.36□□□□□ -0.91
PUDP-201ENST00000381077 TRBV7-3A0A075B6L6 115 aa9.35□□□□□ -0.91
PUDP-201ENST00000381077 RBX1P62877 108 aa9.35□□□□□ -0.91
PUDP-201ENST00000381077 SAMD5Q5TGI4 173 aa9.35□□□□□ -0.91
PUDP-201ENST00000381077 RNASE8Q8TDE3 154 aaKnown RBP9.35□□□□□ -0.91
PUDP-201ENST00000381077 TTTY13Q9BZ97 58 aa9.35□□□□□ -0.91
PUDP-201ENST00000381077 SVEP1Q4LDE5 3571 aa9.35□□□□□ -0.91
PUDP-201ENST00000381077 A0A087WWL8 130 aa9.35□□□□□ -0.91
PUDP-201ENST00000381077 C11orf86A6NJI1 115 aa9.35□□□□□ -0.91
PUDP-201ENST00000381077 K7ERU9 68 aa9.35□□□□□ -0.91
PUDP-201ENST00000381077 CRYBA4P53673 196 aa9.35□□□□□ -0.91
PUDP-201ENST00000381077 ZNF56Q15929 161 aa9.35□□□□□ -0.91
PUDP-201ENST00000381077 TRAV12-2A0A075B6T6 113 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 TMEM238LA0A1B0GVL6 79 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 A6NJY4 79 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 TSHBP01222 138 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 ZNF876PQ49A33 203 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 OCIAD2Q56VL3 154 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 HIST1H4GQ99525 98 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 PRADC1Q9BSG0 188 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 JPT2Q9H910 190 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 SPCS1Q9Y6A9 102 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 IGLV4-69A0A075B6H9 119 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 H3BMM0 161 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 I3L3M4 83 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 BBC3Q96PG8 261 aaPredicted RBP9.34□□□□□ -0.91
PUDP-201ENST00000381077 DUX5Q96PT3 197 aa9.34□□□□□ -0.91
PUDP-201ENST00000381077 CSPG4Q6UVK1 2322 aa9.33□□□□□ -0.92
PUDP-201ENST00000381077 TRAV25A0A0B4J276 109 aa9.33□□□□□ -0.92
PUDP-201ENST00000381077 A8MWV9 139 aa9.33□□□□□ -0.92
PUDP-201ENST00000381077 NFE4Q86UQ8 179 aa9.33□□□□□ -0.92
PUDP-201ENST00000381077 MAPK1IP1LQ8NDC0 245 aa9.33□□□□□ -0.92
PUDP-201ENST00000381077 PRB1P04280 392 aa9.32□□□□□ -0.92
PUDP-201ENST00000381077 MORN3Q6PF18 240 aaPredicted RBP9.32□□□□□ -0.92
PUDP-201ENST00000381077 NHP2Q9NX24 153 aaKnown RBP9.32□□□□□ -0.92
PUDP-201ENST00000381077 SPG11Q96JI7 2443 aa9.32□□□□□ -0.92
PUDP-201ENST00000381077 ZNF415Q09FC8 603 aa9.32□□□□□ -0.92
PUDP-201ENST00000381077 FAM74A4Q5TZK3 123 aa9.32□□□□□ -0.92
PUDP-201ENST00000381077 RAB37Q96AX2 223 aa9.32□□□□□ -0.92
PUDP-201ENST00000381077 Q96MF0 132 aa9.32□□□□□ -0.92
PUDP-201ENST00000381077 PYGO1Q9Y3Y4 419 aa9.32□□□□□ -0.92
PUDP-201ENST00000381077 ZFHX3Q15911 3703 aa9.31□□□□□ -0.92
PUDP-201ENST00000381077 M0R2P5 195 aa9.31□□□□□ -0.92
PUDP-201ENST00000381077 IGKV3-20P01619 116 aa9.31□□□□□ -0.92
PUDP-201ENST00000381077 DEFB131AP59861 70 aa9.31□□□□□ -0.92
PUDP-201ENST00000381077 SCGB2A2Q13296 93 aa9.31□□□□□ -0.92
PUDP-201ENST00000381077 C12orf74Q32Q52 190 aa9.31□□□□□ -0.92
PUDP-201ENST00000381077 C20orf203Q8NBC4 194 aa9.31□□□□□ -0.92
PUDP-201ENST00000381077 SPANXB1Q9NS25 103 aaPredicted RBP9.31□□□□□ -0.92
PUDP-201ENST00000381077 USP9XQ93008 2570 aaPredicted RBP9.31□□□□□ -0.92
PUDP-201ENST00000381077 ZNF815PA8K554 130 aa9.31□□□□□ -0.92
PUDP-201ENST00000381077 RHODO00212 210 aa9.31□□□□□ -0.92
PUDP-201ENST00000381077 SLURP1P55000 103 aa9.31□□□□□ -0.92
PUDP-201ENST00000381077 SPXQ9BT56 116 aa9.31□□□□□ -0.92
PUDP-201ENST00000381077 SELENOKQ9Y6D0 94 aa9.31□□□□□ -0.92
PUDP-201ENST00000381077 COL12A1Q99715 3063 aa9.3□□□□□ -0.92
PUDP-201ENST00000381077 NEGR1Q7Z3B1 354 aa9.3□□□□□ -0.92
PUDP-201ENST00000381077 KRTAP1-3Q8IUG1 177 aa9.3□□□□□ -0.92
PUDP-201ENST00000381077 CFAP46Q8IYW2 2715 aa9.3□□□□□ -0.92
PUDP-201ENST00000381077 IGLL5B9A064 214 aa9.29□□□□□ -0.92
PUDP-201ENST00000381077 KRTAP10-9P60411 292 aa9.29□□□□□ -0.92
PUDP-201ENST00000381077 DYNLRB2Q8TF09 96 aa9.29□□□□□ -0.92
PUDP-201ENST00000381077 IGSF10Q6WRI0 2623 aa9.29□□□□□ -0.92
PUDP-201ENST00000381077 RPL39P62891 51 aaKnown RBP9.29□□□□□ -0.92
PUDP-201ENST00000381077 DEFB114Q30KQ6 69 aa9.29□□□□□ -0.92
PUDP-201ENST00000381077 TMEM61Q8N0U2 210 aa9.29□□□□□ -0.92
PUDP-201ENST00000381077 RAX2Q96IS3 184 aa9.29□□□□□ -0.92
PUDP-201ENST00000381077 ZNF479Q96JC4 524 aa9.29□□□□□ -0.92
PUDP-201ENST00000381077 DNAJC30Q96LL9 226 aa9.29□□□□□ -0.92
PUDP-201ENST00000381077 SCGB1D4Q6XE38 83 aa9.28□□□□□ -0.92
PUDP-201ENST00000381077 DLX4Q92988 240 aaPredicted RBP9.28□□□□□ -0.92
PUDP-201ENST00000381077 MAP6D1Q9H9H5 199 aa9.28□□□□□ -0.92
PUDP-201ENST00000381077 VPS13CQ709C8 3753 aa9.28□□□□□ -0.92
PUDP-201ENST00000381077 RBMY1A1P0DJD3 496 aaKnown RBP9.28□□□□□ -0.92
PUDP-201ENST00000381077 RBMY1CP0DJD4 496 aa9.28□□□□□ -0.92
PUDP-201ENST00000381077 RBMY1FQ15415 496 aaKnown RBP9.28□□□□□ -0.92
PUDP-201ENST00000381077 RRN3P1Q2M238 152 aa9.28□□□□□ -0.92
PUDP-201ENST00000381077 KNCNA6PVL3 124 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms