RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 WDR86Q86TI4 376 aa8.43□□□□□ -1.06
CLCN4-202ENST00000380833 LRRK1Q38SD2 2015 aa8.43□□□□□ -1.06
CLCN4-202ENST00000380833 HOXB4P17483 251 aaPredicted RBP8.43□□□□□ -1.06
CLCN4-202ENST00000380833 NANOS2P60321 138 aaKnown RBP8.43□□□□□ -1.06
CLCN4-202ENST00000380833 PHF3Q92576 2039 aaKnown RBP8.42□□□□□ -1.06
CLCN4-202ENST00000380833 NACAE9PAV3 2078 aa8.42□□□□□ -1.06
CLCN4-202ENST00000380833 GP9P14770 177 aa8.42□□□□□ -1.06
CLCN4-202ENST00000380833 LOC285556D6RIA3 1793 aa8.42□□□□□ -1.06
CLCN4-202ENST00000380833 YPEL4Q96NS1 127 aa8.42□□□□□ -1.06
CLCN4-202ENST00000380833 KIF26BQ2KJY2 2108 aa8.42□□□□□ -1.06
CLCN4-202ENST00000380833 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
CLCN4-202ENST00000380833 PARP14Q460N5 1801 aa8.42□□□□□ -1.06
CLCN4-202ENST00000380833 WI2-2373I1.2A0A1W2PRP0 233 aa8.42□□□□□ -1.06
CLCN4-202ENST00000380833 INSL3P51460 131 aa8.42□□□□□ -1.06
CLCN4-202ENST00000380833 SND1-IT1Q9HBX3 110 aa8.42□□□□□ -1.06
CLCN4-202ENST00000380833 CNOT1A5YKK6 2376 aaKnown RBP8.42□□□□□ -1.06
CLCN4-202ENST00000380833 ETV2O00321 342 aaPredicted RBP8.41□□□□□ -1.06
CLCN4-202ENST00000380833 PRR25Q96S07 402 aa8.41□□□□□ -1.06
CLCN4-202ENST00000380833 TMEM14CQ9P0S9 112 aa8.41□□□□□ -1.06
CLCN4-202ENST00000380833 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
CLCN4-202ENST00000380833 GNRH2O43555 120 aa8.41□□□□□ -1.06
CLCN4-202ENST00000380833 PSME4Q14997 1843 aa8.41□□□□□ -1.06
CLCN4-202ENST00000380833 NDUFB1O75438 58 aa8.41□□□□□ -1.06
CLCN4-202ENST00000380833 IGHV4-38-2P0DP08 117 aa8.41□□□□□ -1.06
CLCN4-202ENST00000380833 UFSP1Q6NVU6 142 aa8.41□□□□□ -1.06
CLCN4-202ENST00000380833 PIK3CD-AS1Q5SR53 167 aa8.41□□□□□ -1.06
CLCN4-202ENST00000380833 PLCE1Q9P212 2302 aa8.41□□□□□ -1.06
CLCN4-202ENST00000380833 A0A096LNI7 61 aa8.4□□□□□ -1.06
CLCN4-202ENST00000380833 COX7A2LO14548 114 aa8.4□□□□□ -1.06
CLCN4-202ENST00000380833 CCL18P55774 89 aa8.4□□□□□ -1.06
CLCN4-202ENST00000380833 RPS28P62857 69 aaKnown RBP8.4□□□□□ -1.06
CLCN4-202ENST00000380833 CASC2Q6XLA1 102 aa8.4□□□□□ -1.06
CLCN4-202ENST00000380833 FREM3P0C091 2139 aa8.4□□□□□ -1.06
CLCN4-202ENST00000380833 GREB1Q4ZG55 1949 aa8.4□□□□□ -1.06
CLCN4-202ENST00000380833 IGHV4-30-2A0A087WSY4 118 aa8.4□□□□□ -1.06
CLCN4-202ENST00000380833 NCR3O14931 201 aa8.4□□□□□ -1.06
CLCN4-202ENST00000380833 DEFB135Q30KP9 77 aa8.4□□□□□ -1.06
CLCN4-202ENST00000380833 CRIPAKQ8N1N5 446 aa8.4□□□□□ -1.06
CLCN4-202ENST00000380833 PLA2G2EQ9NZK7 142 aa8.4□□□□□ -1.07
CLCN4-202ENST00000380833 GYPEP15421 78 aa8.4□□□□□ -1.07
CLCN4-202ENST00000380833 DEFB113Q30KQ7 82 aa8.4□□□□□ -1.07
CLCN4-202ENST00000380833 MIFP14174 115 aa8.39□□□□□ -1.07
CLCN4-202ENST00000380833 C4orf26Q17RF5 130 aa8.39□□□□□ -1.07
CLCN4-202ENST00000380833 FXYD5Q96DB9 178 aa8.39□□□□□ -1.07
CLCN4-202ENST00000380833 IGKV2-24A0A0C4DH68 120 aa8.39□□□□□ -1.07
CLCN4-202ENST00000380833 SEM1Q6ZVN7 128 aa8.39□□□□□ -1.07
CLCN4-202ENST00000380833 MDFICQ9P1T7 246 aa8.39□□□□□ -1.07
CLCN4-202ENST00000380833 ETDCA0A1B0GVM5 59 aa8.39□□□□□ -1.07
CLCN4-202ENST00000380833 KLK5Q9Y337 293 aaPredicted RBP8.39□□□□□ -1.07
CLCN4-202ENST00000380833 WNK2Q9Y3S1 2297 aa8.38□□□□□ -1.07
CLCN4-202ENST00000380833 CAMK2N2Q96S95 79 aa8.38□□□□□ -1.07
CLCN4-202ENST00000380833 TOMM6Q96B49 74 aa8.38□□□□□ -1.07
CLCN4-202ENST00000380833 Q6JHZ5 121 aa8.38□□□□□ -1.07
CLCN4-202ENST00000380833 BRCA1P38398 1863 aaKnown RBP8.38□□□□□ -1.07
CLCN4-202ENST00000380833 BPY2O14599 106 aa8.38□□□□□ -1.07
CLCN4-202ENST00000380833 GATA3P23771 443 aa8.38□□□□□ -1.07
CLCN4-202ENST00000380833 TRBV30A0A0K0K1B3 111 aa8.37□□□□□ -1.07
CLCN4-202ENST00000380833 FAM19A3Q7Z5A8 133 aa8.37□□□□□ -1.07
CLCN4-202ENST00000380833 C17orf77Q96MU5 243 aa8.37□□□□□ -1.07
CLCN4-202ENST00000380833 TRAV7A0A075B6U4 112 aa8.37□□□□□ -1.07
CLCN4-202ENST00000380833 B3GALT5-AS1P59052 145 aa8.37□□□□□ -1.07
CLCN4-202ENST00000380833 SPRY4Q9C004 299 aa8.37□□□□□ -1.07
CLCN4-202ENST00000380833 M0R2N4 97 aa8.37□□□□□ -1.07
CLCN4-202ENST00000380833 C9orf66Q5T8R8 295 aa8.36□□□□□ -1.07
CLCN4-202ENST00000380833 Q6ZR03 302 aa8.36□□□□□ -1.07
CLCN4-202ENST00000380833 TP73-AS1Q9UF72 201 aa8.36□□□□□ -1.07
CLCN4-202ENST00000380833 IGLV3-32A0A0A0MS00 114 aa8.36□□□□□ -1.07
CLCN4-202ENST00000380833 MRPL36Q9P0J6 103 aaKnown RBP8.36□□□□□ -1.07
CLCN4-202ENST00000380833 IGHV4OR15-8A0A075B7B6 117 aa8.36□□□□□ -1.07
CLCN4-202ENST00000380833 A0A087WW49 117 aa8.36□□□□□ -1.07
CLCN4-202ENST00000380833 IGHV4-61A0A0C4DH41 118 aa8.36□□□□□ -1.07
CLCN4-202ENST00000380833 CXCL6P80162 114 aa8.36□□□□□ -1.07
CLCN4-202ENST00000380833 LRRC37AA6NMS7 1700 aa8.35□□□□□ -1.07
CLCN4-202ENST00000380833 IGKV2D-26A0A0A0MRZ7 120 aa8.35□□□□□ -1.07
CLCN4-202ENST00000380833 NYNRINQ9P2P1 1898 aaKnown RBP8.35□□□□□ -1.07
CLCN4-202ENST00000380833 MIAQ16674 131 aa8.35□□□□□ -1.07
CLCN4-202ENST00000380833 TMEM14BQ9NUH8 114 aa8.35□□□□□ -1.07
CLCN4-202ENST00000380833 C9orf47Q6ZRZ4 202 aa8.35□□□□□ -1.07
CLCN4-202ENST00000380833 ACACAQ13085 2346 aa8.35□□□□□ -1.07
CLCN4-202ENST00000380833 ZNF503-AS2A6NEH8 195 aa8.35□□□□□ -1.07
CLCN4-202ENST00000380833 GPHB5Q86YW7 130 aa8.35□□□□□ -1.07
CLCN4-202ENST00000380833 NOTCH3Q9UM47 2321 aa8.34□□□□□ -1.07
CLCN4-202ENST00000380833 C2orf91Q6ZV80 131 aa8.34□□□□□ -1.07
CLCN4-202ENST00000380833 RNF5Q99942 180 aa8.34□□□□□ -1.07
CLCN4-202ENST00000380833 IGLV3-9A0A075B6K5 115 aa8.34□□□□□ -1.07
CLCN4-202ENST00000380833 IGHV7-4-1A0A0J9YVY3 117 aa8.34□□□□□ -1.07
CLCN4-202ENST00000380833 LOXP28300 417 aaPredicted RBP8.34□□□□□ -1.07
CLCN4-202ENST00000380833 MRPL53Q96EL3 112 aaKnown RBP8.34□□□□□ -1.07
CLCN4-202ENST00000380833 H3BRN7 92 aa8.34□□□□□ -1.08
CLCN4-202ENST00000380833 PSPHP1O15172 72 aa8.34□□□□□ -1.08
CLCN4-202ENST00000380833 CTSGP08311 255 aa8.34□□□□□ -1.08
CLCN4-202ENST00000380833 SPRNQ5BIV9 151 aa8.34□□□□□ -1.08
CLCN4-202ENST00000380833 NRXN2Q9P2S2 1712 aa8.33□□□□□ -1.08
CLCN4-202ENST00000380833 DAND5Q8N907 189 aa8.33□□□□□ -1.08
CLCN4-202ENST00000380833 ROS1P08922 2347 aa8.33□□□□□ -1.08
CLCN4-202ENST00000380833 TRIAP1O43715 76 aa8.33□□□□□ -1.08
CLCN4-202ENST00000380833 PRR20EP86478 221 aa8.33□□□□□ -1.08
CLCN4-202ENST00000380833 PRR20CP86479 221 aa8.33□□□□□ -1.08
CLCN4-202ENST00000380833 PRR20DP86480 221 aa8.33□□□□□ -1.08
CLCN4-202ENST00000380833 PRR20BP86481 221 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms