RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 IGHV3-16A0A0C4DH30 117 aa12.17□□□□□ -0.46
VPS16-203ENST00000380469 TMEM238LA0A1B0GVL6 79 aa12.17□□□□□ -0.46
VPS16-203ENST00000380469 TMEM89A2RUT3 159 aa12.17□□□□□ -0.46
VPS16-203ENST00000380469 A6NJY4 79 aa12.17□□□□□ -0.46
VPS16-203ENST00000380469 LGALS9O00182 355 aa12.17□□□□□ -0.46
VPS16-203ENST00000380469 FAM74A4Q5TZK3 123 aa12.17□□□□□ -0.46
VPS16-203ENST00000380469 A0A0J9YX75 114 aa12.16□□□□□ -0.46
VPS16-203ENST00000380469 C11orf86A6NJI1 115 aa12.16□□□□□ -0.46
VPS16-203ENST00000380469 IGKV3-20P01619 116 aa12.16□□□□□ -0.46
VPS16-203ENST00000380469 SRSF9Q13242 221 aaKnown RBP eCLIP12.16□□□□□ -0.46
VPS16-203ENST00000380469 DEFB112Q30KQ8 113 aa12.16□□□□□ -0.46
VPS16-203ENST00000380469 DEFB104AQ8WTQ1 72 aa12.16□□□□□ -0.46
VPS16-203ENST00000380469 C9orf85Q96MD7 179 aa12.16□□□□□ -0.46
VPS16-203ENST00000380469 TIMM17AQ99595 171 aa12.16□□□□□ -0.46
VPS16-203ENST00000380469 IGLV4-69A0A075B6H9 119 aa12.16□□□□□ -0.46
VPS16-203ENST00000380469 RPL39P62891 51 aaKnown RBP12.16□□□□□ -0.46
VPS16-203ENST00000380469 TRAV12-2A0A075B6T6 113 aa12.15□□□□□ -0.46
VPS16-203ENST00000380469 TRBV6-5A0A0K0K1A5 114 aa12.15□□□□□ -0.46
VPS16-203ENST00000380469 TRBV27A0A0K0K1C4 114 aa12.15□□□□□ -0.46
VPS16-203ENST00000380469 TEX48A0A1B0GUV7 120 aa12.15□□□□□ -0.46
VPS16-203ENST00000380469 COX6B1P14854 86 aa12.15□□□□□ -0.46
VPS16-203ENST00000380469 H3BMG7 143 aa12.15□□□□□ -0.46
VPS16-203ENST00000380469 MDFICQ9P1T7 246 aa12.15□□□□□ -0.46
VPS16-203ENST00000380469 K7EQG2 157 aa12.14□□□□□ -0.47
VPS16-203ENST00000380469 EMP1P54849 157 aa12.14□□□□□ -0.47
VPS16-203ENST00000380469 ZNF56Q15929 161 aa12.14□□□□□ -0.47
VPS16-203ENST00000380469 C10orf99Q6UWK7 81 aa12.14□□□□□ -0.47
VPS16-203ENST00000380469 PLEKHB2Q96CS7 222 aa12.14□□□□□ -0.47
VPS16-203ENST00000380469 IGHV1OR15-1A0A075B7D0 117 aa12.14□□□□□ -0.47
VPS16-203ENST00000380469 Q8N1Y9 231 aa12.14□□□□□ -0.47
VPS16-203ENST00000380469 LINC01356Q8N9X3 169 aa12.14□□□□□ -0.47
VPS16-203ENST00000380469 KLHL30-AS1Q8NEE0 82 aa12.14□□□□□ -0.47
VPS16-203ENST00000380469 ZNF256Q9Y2P7 627 aaPredicted RBP12.14□□□□□ -0.47
VPS16-203ENST00000380469 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.13□□□□□ -0.471e-6■■■■■ 27.6
VPS16-203ENST00000380469 WFDC2Q14508 124 aa12.13□□□□□ -0.47
VPS16-203ENST00000380469 GAGE13Q4V321 117 aa12.12□□□□□ -0.47
VPS16-203ENST00000380469 MAP1AP78559 2803 aaPredicted RBP12.12□□□□□ -0.47
VPS16-203ENST00000380469 M0QY20 66 aa12.12□□□□□ -0.47
VPS16-203ENST00000380469 SYNJ2BPP57105 145 aa12.12□□□□□ -0.47
VPS16-203ENST00000380469 SPINK13Q1W4C9 94 aa12.12□□□□□ -0.47
VPS16-203ENST00000380469 TMEM170BQ5T4T1 132 aa12.12□□□□□ -0.47
VPS16-203ENST00000380469 AMTNQ6UX39 209 aa12.12□□□□□ -0.47
VPS16-203ENST00000380469 TRPT1Q86TN4 253 aaKnown RBP12.12□□□□□ -0.47
VPS16-203ENST00000380469 MRPL16Q9NX20 251 aaKnown RBP12.12□□□□□ -0.47
VPS16-203ENST00000380469 PGPEP1Q9NXJ5 209 aa12.12□□□□□ -0.47
VPS16-203ENST00000380469 MORN3Q6PF18 240 aaPredicted RBP12.11□□□□□ -0.47
VPS16-203ENST00000380469 SPG11Q96JI7 2443 aa12.11□□□□□ -0.47
VPS16-203ENST00000380469 J3QR89 54 aa12.11□□□□□ -0.47
VPS16-203ENST00000380469 ZNF876PQ49A33 203 aa12.11□□□□□ -0.47
VPS16-203ENST00000380469 SPANXB1Q9NS25 103 aaPredicted RBP12.11□□□□□ -0.47
VPS16-203ENST00000380469 RHOHQ15669 191 aa12.1□□□□□ -0.47
VPS16-203ENST00000380469 COL12A1Q99715 3063 aa12.1□□□□□ -0.47
VPS16-203ENST00000380469 J3QLI3 93 aa12.09□□□□□ -0.47
VPS16-203ENST00000380469 NSUN5P1Q3KNT7 163 aa12.09□□□□□ -0.47
VPS16-203ENST00000380469 NRGNQ92686 78 aa12.09□□□□□ -0.47
VPS16-203ENST00000380469 A0A0J9YY99 117 aa12.09□□□□□ -0.47
VPS16-203ENST00000380469 UBE2D1P51668 147 aa12.09□□□□□ -0.47
VPS16-203ENST00000380469 ZNRF2Q8NHG8 242 aa12.09□□□□□ -0.47
VPS16-203ENST00000380469 TRGV11A0A075B6L2 103 aa12.08□□□□□ -0.48
VPS16-203ENST00000380469 ELANEP08246 267 aa12.08□□□□□ -0.48
VPS16-203ENST00000380469 TGFAP01135 160 aa12.08□□□□□ -0.48
VPS16-203ENST00000380469 DUX5Q96PT3 197 aa12.08□□□□□ -0.48
VPS16-203ENST00000380469 CSPG4Q6UVK1 2322 aa12.07□□□□□ -0.48
VPS16-203ENST00000380469 I3L3M4 83 aa12.07□□□□□ -0.48
VPS16-203ENST00000380469 HOXD3P31249 432 aaPredicted RBP12.07□□□□□ -0.48
VPS16-203ENST00000380469 ETDBQ3ZM63 59 aa12.07□□□□□ -0.48
VPS16-203ENST00000380469 CELSR2Q9HCU4 2923 aa12.07□□□□□ -0.48
VPS16-203ENST00000380469 LGALS3P17931 250 aaKnown RBP12.06□□□□□ -0.48
VPS16-203ENST00000380469 SH2D6Q7Z4S9 175 aa12.06□□□□□ -0.48
VPS16-203ENST00000380469 VPREB3Q9UKI3 123 aa12.06□□□□□ -0.48
VPS16-203ENST00000380469 PKD1L2Q7Z442 2459 aa12.06□□□□□ -0.48
VPS16-203ENST00000380469 J3QQQ9 107 aa12.06□□□□□ -0.48
VPS16-203ENST00000380469 APOMO95445 188 aa12.06□□□□□ -0.48
VPS16-203ENST00000380469 NFE4Q86UQ8 179 aa12.06□□□□□ -0.48
VPS16-203ENST00000380469 DLX4Q92988 240 aaPredicted RBP12.06□□□□□ -0.48
VPS16-203ENST00000380469 PRO0461Q9UI25 63 aa12.06□□□□□ -0.48
VPS16-203ENST00000380469 TSPEAR-AS2P59090 65 aa12.05□□□□□ -0.48
VPS16-203ENST00000380469 RNF152Q8N8N0 203 aa12.05□□□□□ -0.48
VPS16-203ENST00000380469 SLC25A29Q8N8R3 303 aa12.05□□□□□ -0.48
VPS16-203ENST00000380469 UBE2E2Q96LR5 201 aa12.05□□□□□ -0.48
VPS16-203ENST00000380469 LOC107984156A0A0G2JMH3 177 aa12.05□□□□□ -0.48
VPS16-203ENST00000380469 TSPAN13O95857 204 aa12.05□□□□□ -0.48
VPS16-203ENST00000380469 ARL17AQ8IVW1 177 aa12.05□□□□□ -0.48
VPS16-203ENST00000380469 MTURNQ8N3F0 131 aa12.05□□□□□ -0.48
VPS16-203ENST00000380469 C20orf203Q8NBC4 194 aa12.05□□□□□ -0.48
VPS16-203ENST00000380469 OPRPNQ99935 248 aaPredicted RBP12.05□□□□□ -0.48
VPS16-203ENST00000380469 LYRM7Q5U5X0 104 aa12.04□□□□□ -0.48
VPS16-203ENST00000380469 DOPEY1Q5JWR5 2465 aa12.04□□□□□ -0.48
VPS16-203ENST00000380469 IGHV3-30P01768 117 aa12.04□□□□□ -0.48
VPS16-203ENST00000380469 P0DMU3 169 aa12.04□□□□□ -0.48
VPS16-203ENST00000380469 FAM231AP0DMU4 169 aa12.04□□□□□ -0.48
VPS16-203ENST00000380469 FAM231CP0DMU5 169 aa12.04□□□□□ -0.48
VPS16-203ENST00000380469 IGHV3-30-5P0DP03 117 aa12.04□□□□□ -0.48
VPS16-203ENST00000380469 TCTEX1D4Q5JR98 221 aa12.04□□□□□ -0.48
VPS16-203ENST00000380469 NDUFA11Q86Y39 141 aa12.04□□□□□ -0.48
VPS16-203ENST00000380469 LEPROTO15243 131 aa12.03□□□□□ -0.48
VPS16-203ENST00000380469 PSMB2P49721 201 aa12.03□□□□□ -0.48
VPS16-203ENST00000380469 CFAP46Q8IYW2 2715 aa12.03□□□□□ -0.48
VPS16-203ENST00000380469 MAPK1IP1LQ8NDC0 245 aa12.03□□□□□ -0.48
VPS16-203ENST00000380469 VCX2Q9H322 139 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms