RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 RPL7P18124 248 aaKnown RBP4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 LOXP28300 417 aaPredicted RBP4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 HES1Q14469 280 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 GPHB5Q86YW7 130 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 KLHL30-AS1Q8NEE0 82 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 EEF1AKMT3Q96AZ1 226 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 LINC00526Q96FQ7 95 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 DEFB127Q9H1M4 99 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 ZZEF1O43149 2961 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 H3BMM0 161 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 H7C423 109 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 UBE2E1P51965 193 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 SRSF9Q13242 221 aaKnown RBP eCLIP4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 ZNF876PQ49A33 203 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 C2orf66Q6UXQ4 117 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 NUP37Q8NFH4 326 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 UBE2WQ96B02 151 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 UBE2E2Q96LR5 201 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 LITAFQ99732 161 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 Q9HAA7 133 aa4.99□□□□□ -1.61
CDKAL1-202ENST00000378610 TRAV2A0A0B4J234 112 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 IGHV1-3A0A0C4DH29 117 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 TMEM223A0PJW6 202 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 TNFAIP6P98066 277 aaPredicted RBP4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 TMEM170BQ5T4T1 132 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 C3orf22Q8N5N4 141 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 NPBQ8NG41 125 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 C2orf48Q96LS8 159 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 TIMM17AQ99595 171 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 SMG1Q96Q15 3661 aaKnown RBP4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 IGHV4OR15-8A0A075B7B6 117 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 A0A087WW49 117 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 SDHAF1A6NFY7 115 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 H3BVH4 76 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 LINC00694P0DN24 101 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 C9orf47Q6ZRZ4 202 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 C5orf38Q86SI9 138 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 PRSS33Q8NF86 280 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 CHCHD5Q9BSY4 110 aa4.98□□□□□ -1.61
CDKAL1-202ENST00000378610 ATP1A1-AS1Q5TC04 95 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 SCGB1D4Q6XE38 83 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 C14orf178Q8N769 122 aaPredicted RBP4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 ZNRF2Q8NHG8 242 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 TMEM141Q96I45 108 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 PRAC2D3DTV9 90 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 UQCRQO14949 82 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 ACYP1P07311 99 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 CRYGAP11844 174 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 A0A1W2PNU3 283 aaPredicted RBP4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 BUB1B-PAK6H3BSN5 160 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 BUB3O43684 328 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 CXCL5P42830 114 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 LINC00315P59091 139 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 SFTA2Q6UW10 78 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 FAM19A4Q96LR4 140 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 TP53TG1Q9Y2A0 90 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 LENEPQ9Y5L5 61 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 KIF25-AS1Q9Y6Z4 181 aa4.97□□□□□ -1.61
CDKAL1-202ENST00000378610 LEPROTO15243 131 aa4.96□□□□□ -1.62
CDKAL1-202ENST00000378610 HERVK_113P61574 105 aa4.96□□□□□ -1.62
CDKAL1-202ENST00000378610 PMVKQ15126 192 aa4.96□□□□□ -1.62
CDKAL1-202ENST00000378610 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.96□□□□□ -1.62
CDKAL1-202ENST00000378610 DNAJC13O75165 2243 aa4.96□□□□□ -1.62
CDKAL1-202ENST00000378610 PRB4P10163 310 aaPredicted RBP4.96□□□□□ -1.62
CDKAL1-202ENST00000378610 DCANP1Q8TF63 244 aa4.96□□□□□ -1.62
CDKAL1-202ENST00000378610 DCHS1Q96JQ0 3298 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 J3QQQ9 107 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 LST1O00453 97 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 PPP1R17O96001 155 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 POLR2KP53803 58 aaKnown RBP4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 TMEM105Q8N8V8 129 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 METTL26Q96S19 204 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 KIAA0100Q14667 2235 aaKnown RBP4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 J3KT08 172 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 IGHV1-69P01742 117 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 CTSGP08311 255 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 APELAP0DMC3 54 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 FAM19A5Q7Z5A7 132 aaPredicted RBP4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 TMEM219Q86XT9 240 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 TMEM101Q96IK0 257 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 DUX3Q96PT4 197 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 DPH3P1Q9H4G8 78 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 ZFHX4Q86UP3 3567 aa4.95□□□□□ -1.62
CDKAL1-202ENST00000378610 PLXNB1O43157 2135 aa4.94□□□□□ -1.62
CDKAL1-202ENST00000378610 DEFB108BQ8NET1 73 aa4.94□□□□□ -1.62
CDKAL1-202ENST00000378610 SMCR5Q8TEV8 140 aa4.94□□□□□ -1.62
CDKAL1-202ENST00000378610 RPL39LQ96EH5 51 aaKnown RBP4.94□□□□□ -1.62
CDKAL1-202ENST00000378610 ARFGEF3Q5TH69 2177 aa4.94□□□□□ -1.62
CDKAL1-202ENST00000378610 CLPSL1A2RUU4 121 aa4.94□□□□□ -1.62
CDKAL1-202ENST00000378610 NPFFO15130 113 aa4.94□□□□□ -1.62
CDKAL1-202ENST00000378610 ZNF22P17026 224 aaPredicted RBP4.94□□□□□ -1.62
CDKAL1-202ENST00000378610 LYPD2Q6UXB3 125 aa4.94□□□□□ -1.62
CDKAL1-202ENST00000378610 MUSTN1Q8IVN3 82 aa4.94□□□□□ -1.62
CDKAL1-202ENST00000378610 IGHV3-72A0A0B4J1Y9 119 aa4.94□□□□□ -1.62
CDKAL1-202ENST00000378610 CNEP1R1Q8N9A8 125 aa4.94□□□□□ -1.62
CDKAL1-202ENST00000378610 ITLN2Q8WWU7 325 aaPredicted RBP4.94□□□□□ -1.62
CDKAL1-202ENST00000378610 TNRC18O15417 2968 aaPredicted RBP4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 TRAV17A0A0B4J275 112 aa4.93□□□□□ -1.62
CDKAL1-202ENST00000378610 TRBV6-5A0A0K0K1A5 114 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms