RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 J3QLI3 93 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 CTSGP08311 255 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 SPATA12Q7Z6I5 190 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 ODF3L1Q8IXM7 274 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 BBC3Q96PG8 261 aaPredicted RBP6.54□□□□□ -1.36
VPS36-201ENST00000378060 SPAG8Q99932 426 aaPredicted RBP6.54□□□□□ -1.36
VPS36-201ENST00000378060 XCL2Q9UBD3 114 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 CSMD2Q7Z408 3487 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 C19orf71A6NCJ1 209 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 IGLV1-47P01700 117 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 SPRNQ5BIV9 151 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 FOXI2Q6ZQN5 318 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 TMEM243Q9BU79 118 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 EDA2RQ9HAV5 297 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 CSPG4Q6UVK1 2322 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 CENPVL3A0A0U1RRI6 287 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 BUB3O43684 328 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 CTRLP40313 264 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 FOXE3Q13461 319 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 CRIP3Q6Q6R5 217 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 IGHV7-81A0A0B4J1V7 117 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 TRAV13-2A0A0B4J235 113 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 WI2-2373I1.2A0A1W2PRP0 233 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 TAX1BP3O14907 124 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 IFITM1P13164 125 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 RPL35AP18077 110 aaKnown RBP6.53□□□□□ -1.36
VPS36-201ENST00000378060 C9orf153Q5TBE3 101 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 ZNRF2Q8NHG8 242 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 TEX48A0A1B0GUV7 120 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 CGB3P0DN86 165 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 CGB7P0DN87 165 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 NSUN5P1Q3KNT7 163 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 VPS13CQ709C8 3753 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 WNK1Q9H4A3 2382 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 PRR14LQ5THK1 2151 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 TRAV12-1A0A0B4J245 112 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 GAGE12JA6NER3 117 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 GATA1P15976 413 aaPredicted RBP6.53□□□□□ -1.36
VPS36-201ENST00000378060 GAGE4Q13068 117 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 GAGE5Q13069 117 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 TRAV12-2A0A075B6T6 113 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 C2orf70A6NJV1 201 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 IGLV2-23P01705 113 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 ZNF295-AS1Q8N0V1 137 aa6.53□□□□□ -1.36
VPS36-201ENST00000378060 A0A1B0GXF2 115 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 VWC2LB2RUY7 222 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 TEX22C9J3V5 150 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 Q6ZPA2 131 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 RNASE8Q8TDE3 154 aaKnown RBP6.52□□□□□ -1.37
VPS36-201ENST00000378060 CARD19Q96LW7 228 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 ZNF48Q96MX3 618 aaPredicted RBP6.52□□□□□ -1.37
VPS36-201ENST00000378060 YPEL4Q96NS1 127 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 LINC00574Q9H8X3 128 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 PRSS47A8MTI9 375 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 GNRH2O43555 120 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 PROP1O75360 226 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 HOXB4P17483 251 aaPredicted RBP6.52□□□□□ -1.37
VPS36-201ENST00000378060 NTN5Q8WTR8 489 aaPredicted RBP6.52□□□□□ -1.37
VPS36-201ENST00000378060 MSRB1Q9NZV6 116 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 IGHG4P01861 327 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 FRMD6-AS1P0C7T7 363 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 NBPF19A0A087WUL8 3843 aa6.52□□□□□ -1.37
VPS36-201ENST00000378060 ZNF503Q96F45 646 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 IGHV3-16A0A0C4DH30 117 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 DEFB130BP0DP73 79 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 DEFB130AP0DP74 79 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 MED14OSP0DP75 135 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 SPANXCQ9NY87 97 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 RNF114Q9Y508 228 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 BRWD1-AS2P59051 145 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 C16orf54Q6UWD8 224 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 UBL5Q9BZL1 73 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 MRPL36Q9P0J6 103 aaKnown RBP6.51□□□□□ -1.37
VPS36-201ENST00000378060 CENPEQ02224 2701 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 GAGE7O76087 117 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 GAGE12FP0CL80 117 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 GAGE12GP0CL81 117 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 GAGE12IP0CL82 117 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 C9orf47Q6ZRZ4 202 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 RITA1Q96K30 269 aa6.51□□□□□ -1.37
VPS36-201ENST00000378060 HRNRQ86YZ3 2850 aaPredicted RBP6.51□□□□□ -1.37
VPS36-201ENST00000378060 IGLV2-8P01709 118 aa6.5□□□□□ -1.37
VPS36-201ENST00000378060 ACYP1P07311 99 aa6.5□□□□□ -1.37
VPS36-201ENST00000378060 FXYD2P54710 66 aa6.5□□□□□ -1.37
VPS36-201ENST00000378060 F6UB75 175 aa6.5□□□□□ -1.37
VPS36-201ENST00000378060 GCN1Q92616 2671 aaKnown RBP6.5□□□□□ -1.37
VPS36-201ENST00000378060 UBR5O95071 2799 aaPredicted RBP6.5□□□□□ -1.37
VPS36-201ENST00000378060 CSMD1Q96PZ7 3565 aa6.5□□□□□ -1.37
VPS36-201ENST00000378060 E7EUB6 86 aa6.5□□□□□ -1.37
VPS36-201ENST00000378060 TEN1Q86WV5 123 aa6.5□□□□□ -1.37
VPS36-201ENST00000378060 Q8N9W7 124 aa6.5□□□□□ -1.37
VPS36-201ENST00000378060 ASH1LQ9NR48 2969 aaKnown RBP6.5□□□□□ -1.37
VPS36-201ENST00000378060 USP9XQ93008 2570 aaPredicted RBP6.5□□□□□ -1.37
VPS36-201ENST00000378060 IGKV1D-37A0A075B6S9 117 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 E9PLD3 99 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 PFN2P35080 140 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 HERV-K104P63124 156 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 ODF1Q14990 250 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 ZFP2Q6ZN57 461 aa6.49□□□□□ -1.37
VPS36-201ENST00000378060 SH2D6Q7Z4S9 175 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms