RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 TRAV12-3A0A0B4J271 114 aa13.46□□□□□ -0.25
GNE-201ENST00000377902 TCL1BO95988 128 aa13.46□□□□□ -0.25
GNE-201ENST00000377902 CFC1BP0CG36 223 aa13.46□□□□□ -0.25
GNE-201ENST00000377902 CFC1P0CG37 223 aa13.46□□□□□ -0.25
GNE-201ENST00000377902 POLR2KP53803 58 aaKnown RBP13.46□□□□□ -0.25
GNE-201ENST00000377902 PMVKQ15126 192 aa13.46□□□□□ -0.25
GNE-201ENST00000377902 NBL1P41271 181 aa13.46□□□□□ -0.26
GNE-201ENST00000377902 UBE2D3P61077 147 aa13.46□□□□□ -0.26
GNE-201ENST00000377902 UBE2D2P62837 147 aa13.46□□□□□ -0.26
GNE-201ENST00000377902 ZNF256Q9Y2P7 627 aaPredicted RBP13.46□□□□□ -0.26
GNE-201ENST00000377902 IGKV3-20P01619 116 aa13.45□□□□□ -0.26
GNE-201ENST00000377902 CARD19Q96LW7 228 aa13.45□□□□□ -0.26
GNE-201ENST00000377902 SDHAF1A6NFY7 115 aa13.45□□□□□ -0.26
GNE-201ENST00000377902 FAM159AQ6UWV7 190 aa13.45□□□□□ -0.26
GNE-201ENST00000377902 SORL1Q92673 2214 aa13.45□□□□□ -0.26
GNE-201ENST00000377902 IGHV3-64A0A075B6Q5 118 aa13.44□□□□□ -0.26
GNE-201ENST00000377902 IGHV3-30P01768 117 aa13.44□□□□□ -0.26
GNE-201ENST00000377902 IGHV3-30-5P0DP03 117 aa13.44□□□□□ -0.26
GNE-201ENST00000377902 APRG1Q8IVJ8 170 aa13.44□□□□□ -0.26
GNE-201ENST00000377902 POM121L12Q8N7R1 296 aa13.44□□□□□ -0.26
GNE-201ENST00000377902 CSMD2Q7Z408 3487 aa13.44□□□□□ -0.26
GNE-201ENST00000377902 IGHV4-38-2P0DP08 117 aa13.44□□□□□ -0.26
GNE-201ENST00000377902 MED14OSP0DP75 135 aa13.44□□□□□ -0.26
GNE-201ENST00000377902 KLRB1Q12918 225 aa13.44□□□□□ -0.26
GNE-201ENST00000377902 TRAV12-2A0A075B6T6 113 aa13.43□□□□□ -0.26
GNE-201ENST00000377902 IGHV4OR15-8A0A075B7B6 117 aa13.43□□□□□ -0.26
GNE-201ENST00000377902 A0A087WW49 117 aa13.43□□□□□ -0.26
GNE-201ENST00000377902 MT-ATP8P03928 68 aa13.43□□□□□ -0.26
GNE-201ENST00000377902 CKS1BP61024 79 aa13.43□□□□□ -0.26
GNE-201ENST00000377902 NXPH4O95158 308 aa13.43□□□□□ -0.26
GNE-201ENST00000377902 KIR2DL4Q99706 377 aa13.43□□□□□ -0.26
GNE-201ENST00000377902 PPP1R17O96001 155 aa13.42□□□□□ -0.26
GNE-201ENST00000377902 HERVK_113P61574 105 aa13.42□□□□□ -0.26
GNE-201ENST00000377902 RAX2Q96IS3 184 aa13.42□□□□□ -0.26
GNE-201ENST00000377902 AMELXQ99217 191 aa13.42□□□□□ -0.26
GNE-201ENST00000377902 MDFICQ9P1T7 246 aa13.42□□□□□ -0.26
GNE-201ENST00000377902 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.42□□□□□ -0.264e-6■■■■□ 23.2
GNE-201ENST00000377902 IGHV1-69DA0A0B4J2H0 117 aa13.42□□□□□ -0.26
GNE-201ENST00000377902 A0A1B0GV72 72 aa13.42□□□□□ -0.26
GNE-201ENST00000377902 KLLNB2CW77 178 aa13.42□□□□□ -0.26
GNE-201ENST00000377902 VCYO14598 125 aa13.42□□□□□ -0.26
GNE-201ENST00000377902 IGHV1-69P01742 117 aa13.42□□□□□ -0.26
GNE-201ENST00000377902 H3BUX3 64 aa13.41□□□□□ -0.26
GNE-201ENST00000377902 SLC25A29Q8N8R3 303 aa13.41□□□□□ -0.26
GNE-201ENST00000377902 SPG11Q96JI7 2443 aa13.4□□□□□ -0.26
GNE-201ENST00000377902 C19orf84I3L1E1 186 aa13.4□□□□□ -0.26
GNE-201ENST00000377902 EIF4EBP3O60516 100 aaPredicted RBP13.4□□□□□ -0.26
GNE-201ENST00000377902 CRIP2P52943 208 aaPredicted RBP13.4□□□□□ -0.26
GNE-201ENST00000377902 XGP55808 180 aa13.4□□□□□ -0.26
GNE-201ENST00000377902 ZNF876PQ49A33 203 aa13.4□□□□□ -0.26
GNE-201ENST00000377902 ZNF580Q9UK33 172 aa13.4□□□□□ -0.26
GNE-201ENST00000377902 NCOR2Q9Y618 2525 aa13.4□□□□□ -0.26
GNE-201ENST00000377902 H7C2G1 150 aa13.4□□□□□ -0.26
GNE-201ENST00000377902 J3QQQ9 107 aa13.4□□□□□ -0.26
GNE-201ENST00000377902 SPINK8P0C7L1 97 aa13.4□□□□□ -0.26
GNE-201ENST00000377902 SCGB1C2P0DMR2 95 aa13.4□□□□□ -0.26
GNE-201ENST00000377902 TMEM95Q3KNT9 176 aa13.4□□□□□ -0.26
GNE-201ENST00000377902 DAZ1Q9NQZ3 744 aaKnown RBP13.39□□□□□ -0.27
GNE-201ENST00000377902 CHD8Q9HCK8 2581 aa13.39□□□□□ -0.27
GNE-201ENST00000377902 CUBNO60494 3623 aa13.38□□□□□ -0.27
GNE-201ENST00000377902 IGHV4-39P01824 125 aa13.38□□□□□ -0.27
GNE-201ENST00000377902 ZNF56Q15929 161 aa13.38□□□□□ -0.27
GNE-201ENST00000377902 C10orf126Q8N4M7 172 aa13.38□□□□□ -0.27
GNE-201ENST00000377902 ATP6V0E2Q8NHE4 81 aa13.38□□□□□ -0.27
GNE-201ENST00000377902 CLUHP3Q96NS8 147 aa13.38□□□□□ -0.27
GNE-201ENST00000377902 ZNF688P0C7X2 276 aa13.38□□□□□ -0.27
GNE-201ENST00000377902 Q5PR19 223 aa13.38□□□□□ -0.27
GNE-201ENST00000377902 PAPPA-AS1Q5QFB9 102 aa13.38□□□□□ -0.27
GNE-201ENST00000377902 DCANP1Q8TF63 244 aa13.38□□□□□ -0.27
GNE-201ENST00000377902 TMEM141Q96I45 108 aa13.38□□□□□ -0.27
GNE-201ENST00000377902 USMG5Q96IX5 58 aa13.38□□□□□ -0.27
GNE-201ENST00000377902 TIMM17AQ99595 171 aa13.38□□□□□ -0.27
GNE-201ENST00000377902 IGHV4-61A0A0C4DH41 118 aa13.37□□□□□ -0.27
GNE-201ENST00000377902 IGHG2P01859 326 aa13.37□□□□□ -0.27
GNE-201ENST00000377902 TRBV27A0A0K0K1C4 114 aa13.37□□□□□ -0.27
GNE-201ENST00000377902 A4D1N5 150 aa13.37□□□□□ -0.27
GNE-201ENST00000377902 LGALS3P17931 250 aaKnown RBP13.37□□□□□ -0.27
GNE-201ENST00000377902 TRPT1Q86TN4 253 aaKnown RBP13.37□□□□□ -0.27
GNE-201ENST00000377902 TEN1Q86WV5 123 aa13.37□□□□□ -0.27
GNE-201ENST00000377902 PRO1854Q9UHT4 67 aa13.37□□□□□ -0.27
GNE-201ENST00000377902 CSPG4Q6UVK1 2322 aa13.37□□□□□ -0.27
GNE-201ENST00000377902 P0DMU3 169 aa13.36□□□□□ -0.27
GNE-201ENST00000377902 FAM231AP0DMU4 169 aa13.36□□□□□ -0.27
GNE-201ENST00000377902 FAM231CP0DMU5 169 aa13.36□□□□□ -0.27
GNE-201ENST00000377902 Q6ZUT4 128 aa13.36□□□□□ -0.27
GNE-201ENST00000377902 RPL32P62910 135 aaKnown RBP13.36□□□□□ -0.27
GNE-201ENST00000377902 C10orf99Q6UWK7 81 aa13.36□□□□□ -0.27
GNE-201ENST00000377902 ANKRD29Q8N6D5 301 aa13.36□□□□□ -0.27
GNE-201ENST00000377902 TRAV2A0A0B4J234 112 aa13.35□□□□□ -0.27
GNE-201ENST00000377902 M0QY20 66 aa13.35□□□□□ -0.27
GNE-201ENST00000377902 Q8N1Y9 231 aa13.35□□□□□ -0.27
GNE-201ENST00000377902 PPDPFLQ8WWR9 84 aa13.35□□□□□ -0.27
GNE-201ENST00000377902 IGHV3-16A0A0C4DH30 117 aa13.35□□□□□ -0.27
GNE-201ENST00000377902 LGALS9O00182 355 aa13.35□□□□□ -0.27
GNE-201ENST00000377902 CRYBA4P53673 196 aa13.35□□□□□ -0.27
GNE-201ENST00000377902 LY6DQ14210 128 aa13.35□□□□□ -0.27
GNE-201ENST00000377902 DOPEY2Q9Y3R5 2298 aa13.34□□□□□ -0.27
GNE-201ENST00000377902 ADARB2-AS1A8MUL3 147 aa13.34□□□□□ -0.27
GNE-201ENST00000377902 TCTEX1D4Q5JR98 221 aa13.34□□□□□ -0.27
GNE-201ENST00000377902 SPTBN4Q9H254 2564 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms