RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 UBE2E2Q96LR5 201 aa8.72□□□□□ -1.01
TNFRSF9-201ENST00000377507 KIR2DL4Q99706 377 aa8.72□□□□□ -1.01
TNFRSF9-201ENST00000377507 MDFICQ9P1T7 246 aa8.72□□□□□ -1.01
TNFRSF9-201ENST00000377507 IGLV4-69A0A075B6H9 119 aa8.71□□□□□ -1.02
TNFRSF9-201ENST00000377507 SDHAF1A6NFY7 115 aa8.71□□□□□ -1.02
TNFRSF9-201ENST00000377507 IGLL5B9A064 214 aa8.71□□□□□ -1.02
TNFRSF9-201ENST00000377507 M0QY20 66 aa8.71□□□□□ -1.02
TNFRSF9-201ENST00000377507 TGFAP01135 160 aa8.71□□□□□ -1.02
TNFRSF9-201ENST00000377507 Q8N1Y9 231 aa8.71□□□□□ -1.02
TNFRSF9-201ENST00000377507 HIST1H4GQ99525 98 aa8.71□□□□□ -1.02
TNFRSF9-201ENST00000377507 PRADC1Q9BSG0 188 aa8.71□□□□□ -1.02
TNFRSF9-201ENST00000377507 ZNF702PQ9H963 129 aa8.71□□□□□ -1.02
TNFRSF9-201ENST00000377507 TP53TG1Q9Y2A0 90 aa8.71□□□□□ -1.02
TNFRSF9-201ENST00000377507 CFAP46Q8IYW2 2715 aa8.71□□□□□ -1.02
TNFRSF9-201ENST00000377507 IGHV1OR15-1A0A075B7D0 117 aa8.7□□□□□ -1.02
TNFRSF9-201ENST00000377507 SYNJ2BPP57105 145 aa8.7□□□□□ -1.02
TNFRSF9-201ENST00000377507 PMVKQ15126 192 aa8.7□□□□□ -1.02
TNFRSF9-201ENST00000377507 AMTNQ6UX39 209 aa8.7□□□□□ -1.02
TNFRSF9-201ENST00000377507 SYT8Q8NBV8 401 aa8.7□□□□□ -1.02
TNFRSF9-201ENST00000377507 TRAV12-2A0A075B6T6 113 aa8.7□□□□□ -1.02
TNFRSF9-201ENST00000377507 F5H697 171 aa8.7□□□□□ -1.02
TNFRSF9-201ENST00000377507 MORN3Q6PF18 240 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF9-201ENST00000377507 FOXI2Q6ZQN5 318 aa8.7□□□□□ -1.02
TNFRSF9-201ENST00000377507 ZNF256Q9Y2P7 627 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF9-201ENST00000377507 SPG11Q96JI7 2443 aa8.69□□□□□ -1.02
TNFRSF9-201ENST00000377507 C11orf86A6NJI1 115 aa8.69□□□□□ -1.02
TNFRSF9-201ENST00000377507 G3V4G9 280 aa8.69□□□□□ -1.02
TNFRSF9-201ENST00000377507 SAP30O75446 220 aa8.69□□□□□ -1.02
TNFRSF9-201ENST00000377507 HOXD3P31249 432 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF9-201ENST00000377507 CACNA1AO00555 2505 aa8.69□□□□□ -1.02
TNFRSF9-201ENST00000377507 SPINK13Q1W4C9 94 aa8.68□□□□□ -1.02
TNFRSF9-201ENST00000377507 NSUN5P1Q3KNT7 163 aa8.68□□□□□ -1.02
TNFRSF9-201ENST00000377507 ZNF876PQ49A33 203 aa8.68□□□□□ -1.02
TNFRSF9-201ENST00000377507 VPS25Q9BRG1 176 aa8.68□□□□□ -1.02
TNFRSF9-201ENST00000377507 A8MTW9 85 aa8.68□□□□□ -1.02
TNFRSF9-201ENST00000377507 IGKV3-20P01619 116 aa8.68□□□□□ -1.02
TNFRSF9-201ENST00000377507 RPL39P62891 51 aaKnown RBP8.68□□□□□ -1.02
TNFRSF9-201ENST00000377507 RHOHQ15669 191 aa8.68□□□□□ -1.02
TNFRSF9-201ENST00000377507 ZNF815PA8K554 130 aa8.67□□□□□ -1.02
TNFRSF9-201ENST00000377507 RRN3P1Q2M238 152 aa8.67□□□□□ -1.02
TNFRSF9-201ENST00000377507 CSPG4Q6UVK1 2322 aa8.67□□□□□ -1.02
TNFRSF9-201ENST00000377507 TRPT1Q86TN4 253 aaKnown RBP8.67□□□□□ -1.02
TNFRSF9-201ENST00000377507 Q8N2B8 174 aa8.67□□□□□ -1.02
TNFRSF9-201ENST00000377507 ZNF479Q96JC4 524 aa8.67□□□□□ -1.02
TNFRSF9-201ENST00000377507 EDA2RQ9HAV5 297 aa8.67□□□□□ -1.02
TNFRSF9-201ENST00000377507 USP9XQ93008 2570 aaPredicted RBP8.67□□□□□ -1.02
TNFRSF9-201ENST00000377507 P0DMU3 169 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 FAM231AP0DMU4 169 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 FAM231CP0DMU5 169 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 IGHV4-31P0DP07 118 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 FAM74A4Q5TZK3 123 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 AGRNO00468 2067 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 TRGV11A0A075B6L2 103 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 HERVK_113P61574 105 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 CD300EQ496F6 205 aaPredicted RBP8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 TCTEX1D4Q5JR98 221 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 NFE4Q86UQ8 179 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 MAPK1IP1LQ8NDC0 245 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 ZNRF2Q8NHG8 242 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 PLEKHB2Q96CS7 222 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 DUX5Q96PT3 197 aa8.66□□□□□ -1.02
TNFRSF9-201ENST00000377507 CELSR2Q9HCU4 2923 aa8.65□□□□□ -1.02
TNFRSF9-201ENST00000377507 TRAV2A0A0B4J234 112 aa8.65□□□□□ -1.02
TNFRSF9-201ENST00000377507 F8W1H4 67 aa8.65□□□□□ -1.02
TNFRSF9-201ENST00000377507 HOXA3O43365 443 aaPredicted RBP8.65□□□□□ -1.02
TNFRSF9-201ENST00000377507 ZNF56Q15929 161 aa8.65□□□□□ -1.02
TNFRSF9-201ENST00000377507 KLHL30-AS1Q8NEE0 82 aa8.65□□□□□ -1.02
TNFRSF9-201ENST00000377507 RBMY1A1P0DJD3 496 aaKnown RBP8.64□□□□□ -1.03
TNFRSF9-201ENST00000377507 RBMY1CP0DJD4 496 aa8.64□□□□□ -1.03
TNFRSF9-201ENST00000377507 UBE2D1P51668 147 aa8.64□□□□□ -1.03
TNFRSF9-201ENST00000377507 RBMY1FQ15415 496 aaKnown RBP8.64□□□□□ -1.03
TNFRSF9-201ENST00000377507 C20orf203Q8NBC4 194 aa8.64□□□□□ -1.03
TNFRSF9-201ENST00000377507 IGSF10Q6WRI0 2623 aa8.64□□□□□ -1.03
TNFRSF9-201ENST00000377507 FLNCQ14315 2725 aa8.64□□□□□ -1.03
TNFRSF9-201ENST00000377507 A0A0J9YY99 117 aa8.64□□□□□ -1.03
TNFRSF9-201ENST00000377507 I3L3M4 83 aa8.64□□□□□ -1.03
TNFRSF9-201ENST00000377507 SCGB2A2Q13296 93 aa8.64□□□□□ -1.03
TNFRSF9-201ENST00000377507 SPAG8Q99932 426 aaPredicted RBP8.64□□□□□ -1.03
TNFRSF9-201ENST00000377507 SPANXB1Q9NS25 103 aaPredicted RBP8.64□□□□□ -1.03
TNFRSF9-201ENST00000377507 BEX4Q9NWD9 120 aaPredicted RBP8.64□□□□□ -1.03
TNFRSF9-201ENST00000377507 TMEM238LA0A1B0GVL6 79 aa8.63□□□□□ -1.03
TNFRSF9-201ENST00000377507 A6NJY4 79 aa8.63□□□□□ -1.03
TNFRSF9-201ENST00000377507 C21orf62-AS1Q17RA5 79 aa8.63□□□□□ -1.03
TNFRSF9-201ENST00000377507 Q5PR19 223 aa8.63□□□□□ -1.03
TNFRSF9-201ENST00000377507 PIK3CD-AS1Q5SR53 167 aa8.63□□□□□ -1.03
TNFRSF9-201ENST00000377507 SCGB1D4Q6XE38 83 aa8.63□□□□□ -1.03
TNFRSF9-201ENST00000377507 DEFB104AQ8WTQ1 72 aa8.63□□□□□ -1.03
TNFRSF9-201ENST00000377507 AMELXQ99217 191 aa8.63□□□□□ -1.03
TNFRSF9-201ENST00000377507 H3BMM0 161 aa8.62□□□□□ -1.03
TNFRSF9-201ENST00000377507 EMP1P54849 157 aa8.62□□□□□ -1.03
TNFRSF9-201ENST00000377507 SLC25A29Q8N8R3 303 aa8.62□□□□□ -1.03
TNFRSF9-201ENST00000377507 PTH2Q96A98 100 aa8.62□□□□□ -1.03
TNFRSF9-201ENST00000377507 SLURP1P55000 103 aa8.62□□□□□ -1.03
TNFRSF9-201ENST00000377507 TSPEAR-AS2P59090 65 aa8.62□□□□□ -1.03
TNFRSF9-201ENST00000377507 LRRC75A-AS1Q8N1F1 130 aa8.62□□□□□ -1.03
TNFRSF9-201ENST00000377507 KNCNA6PVL3 124 aa8.61□□□□□ -1.03
TNFRSF9-201ENST00000377507 SRSF9Q13242 221 aaKnown RBP eCLIP8.61□□□□□ -1.03
TNFRSF9-201ENST00000377507 TMEM170BQ5T4T1 132 aa8.61□□□□□ -1.03
TNFRSF9-201ENST00000377507 C18orf65Q6ZTR6 163 aa8.61□□□□□ -1.03
TNFRSF9-201ENST00000377507 PRO0461Q9UI25 63 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms