RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 INSL3P51460 131 aa9.87□□□□□ -0.83
ACTN1-202ENST00000376839 MRPL16Q9NX20 251 aaKnown RBP9.87□□□□□ -0.83
ACTN1-202ENST00000376839 CSPG4Q6UVK1 2322 aa9.87□□□□□ -0.83
ACTN1-202ENST00000376839 SRSF9Q13242 221 aaKnown RBP eCLIP9.87□□□□□ -0.83
ACTN1-202ENST00000376839 UBE2D1P51668 147 aa9.86□□□□□ -0.83
ACTN1-202ENST00000376839 TSPEAR-AS2P59090 65 aa9.86□□□□□ -0.83
ACTN1-202ENST00000376839 SDHAF1A6NFY7 115 aa9.86□□□□□ -0.83
ACTN1-202ENST00000376839 AZU1P20160 251 aa9.86□□□□□ -0.83
ACTN1-202ENST00000376839 RPL32P62910 135 aaKnown RBP9.86□□□□□ -0.83
ACTN1-202ENST00000376839 PMVKQ15126 192 aa9.86□□□□□ -0.83
ACTN1-202ENST00000376839 FAM74A4Q5TZK3 123 aa9.86□□□□□ -0.83
ACTN1-202ENST00000376839 C10orf105Q8TEF2 133 aa9.86□□□□□ -0.83
ACTN1-202ENST00000376839 TRAV12-2A0A075B6T6 113 aa9.85□□□□□ -0.83
ACTN1-202ENST00000376839 IGHV4-30-2A0A087WSY4 118 aa9.85□□□□□ -0.83
ACTN1-202ENST00000376839 IGKV3-20P01619 116 aa9.85□□□□□ -0.83
ACTN1-202ENST00000376839 CFHR3Q02985 330 aa9.85□□□□□ -0.83
ACTN1-202ENST00000376839 SAMD13Q5VXD3 122 aa9.85□□□□□ -0.83
ACTN1-202ENST00000376839 GAGE12HA6NDE8 117 aa9.85□□□□□ -0.83
ACTN1-202ENST00000376839 VCYO14598 125 aa9.85□□□□□ -0.83
ACTN1-202ENST00000376839 ZNF688P0C7X2 276 aa9.85□□□□□ -0.83
ACTN1-202ENST00000376839 ZNRF2Q8NHG8 242 aa9.85□□□□□ -0.83
ACTN1-202ENST00000376839 KIR2DL4Q99706 377 aa9.85□□□□□ -0.83
ACTN1-202ENST00000376839 MDFICQ9P1T7 246 aa9.85□□□□□ -0.83
ACTN1-202ENST00000376839 A0A0J9YY99 117 aa9.84□□□□□ -0.83
ACTN1-202ENST00000376839 TSPAN13O95857 204 aa9.84□□□□□ -0.83
ACTN1-202ENST00000376839 AVPP01185 164 aa9.84□□□□□ -0.83
ACTN1-202ENST00000376839 CLEC2AQ6UVW9 174 aa9.84□□□□□ -0.83
ACTN1-202ENST00000376839 C10orf99Q6UWK7 81 aa9.84□□□□□ -0.83
ACTN1-202ENST00000376839 TMEM238LA0A1B0GVL6 79 aa9.84□□□□□ -0.83
ACTN1-202ENST00000376839 A6NJY4 79 aa9.84□□□□□ -0.83
ACTN1-202ENST00000376839 APOMO95445 188 aa9.84□□□□□ -0.83
ACTN1-202ENST00000376839 ID1P41134 155 aa9.84□□□□□ -0.83
ACTN1-202ENST00000376839 SMAGPQ0VAQ4 97 aa9.84□□□□□ -0.83
ACTN1-202ENST00000376839 ZNF256Q9Y2P7 627 aaPredicted RBP9.84□□□□□ -0.83
ACTN1-202ENST00000376839 TMEM170BQ5T4T1 132 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 SIGMAR1Q99720 223 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 CCL19Q99731 98 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 CSMD2Q7Z408 3487 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 SMCPP49901 116 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-202ENST00000376839 HERVK_113P61574 105 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 TIMM17AQ99595 171 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 OPRPNQ99935 248 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-202ENST00000376839 SORL1Q92673 2214 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 IGHV3-16A0A0C4DH30 117 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 LOC107984156A0A0G2JMH3 177 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 TRBV27A0A0K0K1C4 114 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 J3QR89 54 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 K7EMT4 169 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 LGALS9O00182 355 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 ARL17AQ8IVW1 177 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 TMEM141Q96I45 108 aa9.83□□□□□ -0.84
ACTN1-202ENST00000376839 ZNF876PQ49A33 203 aa9.82□□□□□ -0.84
ACTN1-202ENST00000376839 PAPPA-AS1Q5QFB9 102 aa9.82□□□□□ -0.84
ACTN1-202ENST00000376839 C9orf85Q96MD7 179 aa9.82□□□□□ -0.84
ACTN1-202ENST00000376839 MSMBP08118 114 aa9.82□□□□□ -0.84
ACTN1-202ENST00000376839 CFAP126Q5VTH2 177 aa9.82□□□□□ -0.84
ACTN1-202ENST00000376839 Q8N1Y9 231 aa9.82□□□□□ -0.84
ACTN1-202ENST00000376839 DLX4Q92988 240 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-202ENST00000376839 PSMB2P49721 201 aa9.81□□□□□ -0.84
ACTN1-202ENST00000376839 ZNF56Q15929 161 aa9.81□□□□□ -0.84
ACTN1-202ENST00000376839 SPATA25Q9BR10 227 aa9.81□□□□□ -0.84
ACTN1-202ENST00000376839 TRBV6-5A0A0K0K1A5 114 aa9.81□□□□□ -0.84
ACTN1-202ENST00000376839 M0QY20 66 aa9.81□□□□□ -0.84
ACTN1-202ENST00000376839 ATP5J2P56134 94 aa9.81□□□□□ -0.84
ACTN1-202ENST00000376839 NDUFA11Q86Y39 141 aa9.81□□□□□ -0.84
ACTN1-202ENST00000376839 AMELXQ99217 191 aa9.81□□□□□ -0.84
ACTN1-202ENST00000376839 CFAP46Q8IYW2 2715 aa9.8□□□□□ -0.84
ACTN1-202ENST00000376839 DOPEY2Q9Y3R5 2298 aa9.8□□□□□ -0.84
ACTN1-202ENST00000376839 PSMB8P28062 276 aa9.8□□□□□ -0.84
ACTN1-202ENST00000376839 A0A0J9YX75 114 aa9.8□□□□□ -0.84
ACTN1-202ENST00000376839 IGHV3-30P01768 117 aa9.8□□□□□ -0.84
ACTN1-202ENST00000376839 IGHV3-30-5P0DP03 117 aa9.8□□□□□ -0.84
ACTN1-202ENST00000376839 UBE2D3P61077 147 aa9.8□□□□□ -0.84
ACTN1-202ENST00000376839 UBE2D2P62837 147 aa9.8□□□□□ -0.84
ACTN1-202ENST00000376839 SPINK13Q1W4C9 94 aa9.8□□□□□ -0.84
ACTN1-202ENST00000376839 FLNCQ14315 2725 aa9.79□□□□□ -0.84
ACTN1-202ENST00000376839 NDUFS8O00217 210 aa9.79□□□□□ -0.84
ACTN1-202ENST00000376839 J3QQQ9 107 aa9.79□□□□□ -0.84
ACTN1-202ENST00000376839 IGHV4-59P01825 116 aa9.79□□□□□ -0.84
ACTN1-202ENST00000376839 CFC1BP0CG36 223 aa9.79□□□□□ -0.84
ACTN1-202ENST00000376839 CFC1P0CG37 223 aa9.79□□□□□ -0.84
ACTN1-202ENST00000376839 P0DMU3 169 aa9.79□□□□□ -0.84
ACTN1-202ENST00000376839 FAM231AP0DMU4 169 aa9.79□□□□□ -0.84
ACTN1-202ENST00000376839 FAM231CP0DMU5 169 aa9.79□□□□□ -0.84
ACTN1-202ENST00000376839 SLC25A29Q8N8R3 303 aa9.79□□□□□ -0.84
ACTN1-202ENST00000376839 NFE4Q86UQ8 179 aa9.78□□□□□ -0.84
ACTN1-202ENST00000376839 ZNF418Q8TF45 676 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-202ENST00000376839 PTH2Q96A98 100 aa9.78□□□□□ -0.84
ACTN1-202ENST00000376839 C1QTNF4Q9BXJ3 329 aa9.78□□□□□ -0.84
ACTN1-202ENST00000376839 UTP20O75691 2785 aaKnown RBP9.78□□□□□ -0.84
ACTN1-202ENST00000376839 IGHV1OR15-1A0A075B7D0 117 aa9.78□□□□□ -0.84
ACTN1-202ENST00000376839 FOXI1Q12951 378 aa9.78□□□□□ -0.84
ACTN1-202ENST00000376839 CREBBPQ92793 2442 aa9.77□□□□□ -0.84
ACTN1-202ENST00000376839 ZANQ9Y493 2812 aa9.77□□□□□ -0.84
ACTN1-202ENST00000376839 K7EQG2 157 aa9.77□□□□□ -0.85
ACTN1-202ENST00000376839 TGFAP01135 160 aa9.77□□□□□ -0.85
ACTN1-202ENST00000376839 NSUN5P1Q3KNT7 163 aa9.77□□□□□ -0.85
ACTN1-202ENST00000376839 SYT8Q8NBV8 401 aa9.77□□□□□ -0.85
ACTN1-202ENST00000376839 ODF3Q96PU9 254 aa9.77□□□□□ -0.85
ACTN1-202ENST00000376839 PRORYQ9H606 182 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms