RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 RBMY1A1P0DJD3 496 aaKnown RBP9.53□□□□□ -0.88
TRIM40-206ENST00000376724 RBMY1CP0DJD4 496 aa9.53□□□□□ -0.88
TRIM40-206ENST00000376724 RBMY1FQ15415 496 aaKnown RBP9.53□□□□□ -0.88
TRIM40-206ENST00000376724 Q6ZVH6 145 aa9.53□□□□□ -0.88
TRIM40-206ENST00000376724 VPS25Q9BRG1 176 aa9.53□□□□□ -0.88
TRIM40-206ENST00000376724 C2CD3Q4AC94 2353 aa9.53□□□□□ -0.88
TRIM40-206ENST00000376724 OR11H12B2RN74 326 aa9.52□□□□□ -0.89
TRIM40-206ENST00000376724 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.52□□□□□ -0.89
TRIM40-206ENST00000376724 AP5S1Q9NUS5 200 aa9.52□□□□□ -0.89
TRIM40-206ENST00000376724 IGHV3-16A0A0C4DH30 117 aa9.51□□□□□ -0.89
TRIM40-206ENST00000376724 STHQ8IWL8 128 aa9.51□□□□□ -0.89
TRIM40-206ENST00000376724 SVIPQ8NHG7 77 aa9.51□□□□□ -0.89
TRIM40-206ENST00000376724 CSTL1Q9H114 145 aa9.51□□□□□ -0.89
TRIM40-206ENST00000376724 A8MTW9 85 aa9.51□□□□□ -0.89
TRIM40-206ENST00000376724 TNFRSF6BO95407 300 aa9.51□□□□□ -0.89
TRIM40-206ENST00000376724 IGLV1-51P01701 117 aa9.51□□□□□ -0.89
TRIM40-206ENST00000376724 MGPP08493 103 aa9.51□□□□□ -0.89
TRIM40-206ENST00000376724 C3orf79P0CE67 100 aa9.51□□□□□ -0.89
TRIM40-206ENST00000376724 PRM2P04554 102 aa9.5□□□□□ -0.89
TRIM40-206ENST00000376724 MAP1LC3AQ9H492 121 aa9.5□□□□□ -0.89
TRIM40-206ENST00000376724 DPH3P1Q9H4G8 78 aa9.5□□□□□ -0.89
TRIM40-206ENST00000376724 NIPBLQ6KC79 2804 aaeCLIP9.5□□□□□ -0.89
TRIM40-206ENST00000376724 MUC4Q99102 2169 aa9.5□□□□□ -0.89
TRIM40-206ENST00000376724 LEPROTL1O95214 131 aa9.49□□□□□ -0.89
TRIM40-206ENST00000376724 OCIAD2Q56VL3 154 aa9.49□□□□□ -0.89
TRIM40-206ENST00000376724 LINC00173Q6ZV60 143 aa9.49□□□□□ -0.89
TRIM40-206ENST00000376724 AP1S3Q96PC3 154 aa9.49□□□□□ -0.89
TRIM40-206ENST00000376724 CST9LQ9H4G1 147 aa9.49□□□□□ -0.89
TRIM40-206ENST00000376724 JPT2Q9H910 190 aa9.49□□□□□ -0.89
TRIM40-206ENST00000376724 CIDEAO60543 219 aa9.49□□□□□ -0.89
TRIM40-206ENST00000376724 VAMP3Q15836 100 aa9.49□□□□□ -0.89
TRIM40-206ENST00000376724 OR2K2Q8NGT1 345 aa9.49□□□□□ -0.89
TRIM40-206ENST00000376724 XCL2Q9UBD3 114 aa9.49□□□□□ -0.89
TRIM40-206ENST00000376724 F8P00451 2351 aa9.48□□□□□ -0.89
TRIM40-206ENST00000376724 LINC00482Q8N8I6 264 aa9.48□□□□□ -0.89
TRIM40-206ENST00000376724 C9orf85Q96MD7 179 aa9.48□□□□□ -0.89
TRIM40-206ENST00000376724 WFDC10AQ9H1F0 79 aa9.48□□□□□ -0.89
TRIM40-206ENST00000376724 TRGV11A0A075B6L2 103 aa9.48□□□□□ -0.89
TRIM40-206ENST00000376724 A0A087WWL8 130 aa9.48□□□□□ -0.89
TRIM40-206ENST00000376724 NXPH4O95158 308 aa9.48□□□□□ -0.89
TRIM40-206ENST00000376724 SMIM17P0DL12 118 aa9.48□□□□□ -0.89
TRIM40-206ENST00000376724 LINC01587Q99440 93 aa9.48□□□□□ -0.89
TRIM40-206ENST00000376724 NRACQ8N912 160 aa9.47□□□□□ -0.89
TRIM40-206ENST00000376724 MRAP2Q96G30 205 aa9.47□□□□□ -0.89
TRIM40-206ENST00000376724 IGHV3OR16-12A0A075B7B8 117 aa9.46□□□□□ -0.89
TRIM40-206ENST00000376724 TRAV9-2A0A087WT02 112 aa9.46□□□□□ -0.89
TRIM40-206ENST00000376724 HSBP1L1C9JCN9 74 aa9.46□□□□□ -0.89
TRIM40-206ENST00000376724 TMEM238C9JI98 176 aa9.46□□□□□ -0.89
TRIM40-206ENST00000376724 INSP01308 110 aa9.46□□□□□ -0.89
TRIM40-206ENST00000376724 FAM74A4Q5TZK3 123 aa9.46□□□□□ -0.89
TRIM40-206ENST00000376724 TRPT1Q86TN4 253 aaKnown RBP9.46□□□□□ -0.89
TRIM40-206ENST00000376724 SYT8Q8NBV8 401 aa9.46□□□□□ -0.89
TRIM40-206ENST00000376724 H0Y8G0 127 aa9.46□□□□□ -0.9
TRIM40-206ENST00000376724 SPATA3Q8NHX4 192 aa9.46□□□□□ -0.9
TRIM40-206ENST00000376724 RPL39LQ96EH5 51 aaKnown RBP9.46□□□□□ -0.9
TRIM40-206ENST00000376724 F5H697 171 aa9.45□□□□□ -0.9
TRIM40-206ENST00000376724 CMC4P56277 68 aaPredicted RBP9.45□□□□□ -0.9
TRIM40-206ENST00000376724 BEAN1Q3B7T3 259 aa9.45□□□□□ -0.9
TRIM40-206ENST00000376724 MAJINQ3KP22 176 aa9.45□□□□□ -0.9
TRIM40-206ENST00000376724 ZNF876PQ49A33 203 aa9.45□□□□□ -0.9
TRIM40-206ENST00000376724 TMEM70Q9BUB7 260 aa9.45□□□□□ -0.9
TRIM40-206ENST00000376724 NXT2Q9NPJ8 142 aaKnown RBP9.45□□□□□ -0.9
TRIM40-206ENST00000376724 KIF25-AS1Q9Y6Z4 181 aa9.45□□□□□ -0.9
TRIM40-206ENST00000376724 A0A096LNJ9 63 aa9.44□□□□□ -0.9
TRIM40-206ENST00000376724 CYSRT1A8MQ03 144 aa9.44□□□□□ -0.9
TRIM40-206ENST00000376724 ATOH7Q8N100 152 aa9.44□□□□□ -0.9
TRIM40-206ENST00000376724 RASL10AQ92737 203 aa9.44□□□□□ -0.9
TRIM40-206ENST00000376724 CLUHP3Q96NS8 147 aa9.44□□□□□ -0.9
TRIM40-206ENST00000376724 HSPB8Q9UJY1 196 aa9.44□□□□□ -0.9
TRIM40-206ENST00000376724 K7ERU9 68 aa9.44□□□□□ -0.9
TRIM40-206ENST00000376724 TAX1BP3O14907 124 aa9.44□□□□□ -0.9
TRIM40-206ENST00000376724 RPL35AP18077 110 aaKnown RBP9.44□□□□□ -0.9
TRIM40-206ENST00000376724 LINC00315P59091 139 aa9.44□□□□□ -0.9
TRIM40-206ENST00000376724 SPATA12Q7Z6I5 190 aa9.44□□□□□ -0.9
TRIM40-206ENST00000376724 CITED1Q99966 193 aa9.44□□□□□ -0.9
TRIM40-206ENST00000376724 MAP1LC3CQ9BXW4 147 aa9.44□□□□□ -0.9
TRIM40-206ENST00000376724 JMJD1CQ15652 2540 aa9.44□□□□□ -0.9
TRIM40-206ENST00000376724 IGLL1P15814 213 aa9.43□□□□□ -0.9
TRIM40-206ENST00000376724 Q8N8P6 123 aa9.43□□□□□ -0.9
TRIM40-206ENST00000376724 MCRIP2Q9BUT9 160 aaKnown RBP9.43□□□□□ -0.9
TRIM40-206ENST00000376724 C19orf73Q9NVV2 129 aa9.43□□□□□ -0.9
TRIM40-206ENST00000376724 SYS1-DBNDD2H3BUS1 97 aa9.43□□□□□ -0.9
TRIM40-206ENST00000376724 HBDP02042 147 aa9.43□□□□□ -0.9
TRIM40-206ENST00000376724 IGLV2-18A0A075B6J9 118 aa9.42□□□□□ -0.9
TRIM40-206ENST00000376724 SUMO2P61956 95 aaKnown RBP9.42□□□□□ -0.9
TRIM40-206ENST00000376724 ZNF415Q09FC8 603 aa9.42□□□□□ -0.9
TRIM40-206ENST00000376724 ZNF56Q15929 161 aa9.42□□□□□ -0.9
TRIM40-206ENST00000376724 SUMO4Q6EEV6 95 aa9.42□□□□□ -0.9
TRIM40-206ENST00000376724 C1orf158Q8N1D5 194 aa9.42□□□□□ -0.9
TRIM40-206ENST00000376724 ZNF747Q9BV97 191 aa9.42□□□□□ -0.9
TRIM40-206ENST00000376724 CRYGDP07320 174 aa9.41□□□□□ -0.9
TRIM40-206ENST00000376724 AZU1P20160 251 aa9.41□□□□□ -0.9
TRIM40-206ENST00000376724 DEFB125Q8N687 156 aa9.41□□□□□ -0.9
TRIM40-206ENST00000376724 FAM110AQ9BQ89 295 aa9.41□□□□□ -0.9
TRIM40-206ENST00000376724 TENM1Q9UKZ4 2725 aa9.41□□□□□ -0.9
TRIM40-206ENST00000376724 LINC01546A6NGU7 62 aa9.41□□□□□ -0.9
TRIM40-206ENST00000376724 PRSS47A8MTI9 375 aa9.41□□□□□ -0.9
TRIM40-206ENST00000376724 POM121L12Q8N7R1 296 aa9.41□□□□□ -0.9
TRIM40-206ENST00000376724 C18orf15Q96N68 181 aa9.41□□□□□ -0.9
TRIM40-206ENST00000376724 SMIM2Q9BVW6 85 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms