RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 LMO1P25800 156 aa9.18□□□□□ -0.94
VPS13A-205ENST00000376636 WI2-2373I1.2A0A1W2PRP0 233 aa9.18□□□□□ -0.94
VPS13A-205ENST00000376636 ELANEP08246 267 aa9.18□□□□□ -0.94
VPS13A-205ENST00000376636 PINLYPA6NC86 204 aa9.17□□□□□ -0.94
VPS13A-205ENST00000376636 LYRM9A8MSI8 78 aa9.17□□□□□ -0.94
VPS13A-205ENST00000376636 COL8A2P25067 703 aa9.17□□□□□ -0.94
VPS13A-205ENST00000376636 Q8N1Y9 231 aa9.17□□□□□ -0.94
VPS13A-205ENST00000376636 A6NED7 52 aa9.17□□□□□ -0.94
VPS13A-205ENST00000376636 LINC00205P59089 165 aa9.17□□□□□ -0.94
VPS13A-205ENST00000376636 IGHV1-58A0A0C4DH39 117 aa9.17□□□□□ -0.94
VPS13A-205ENST00000376636 A0A0U1RQV1 116 aa9.17□□□□□ -0.94
VPS13A-205ENST00000376636 LINC00311Q8N616 119 aa9.17□□□□□ -0.94
VPS13A-205ENST00000376636 TRAV23DV6A0A075B6W5 121 aa9.17□□□□□ -0.94
VPS13A-205ENST00000376636 HOXB4P17483 251 aaPredicted RBP9.16□□□□□ -0.94
VPS13A-205ENST00000376636 IGLV10-54A0A075B6I4 117 aa9.16□□□□□ -0.94
VPS13A-205ENST00000376636 G3V318 75 aa9.16□□□□□ -0.94
VPS13A-205ENST00000376636 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
VPS13A-205ENST00000376636 TRAV26-1A0A087WT03 109 aa9.16□□□□□ -0.94
VPS13A-205ENST00000376636 A0A0J9YY99 117 aa9.16□□□□□ -0.94
VPS13A-205ENST00000376636 GNLYP22749 145 aa9.15□□□□□ -0.94
VPS13A-205ENST00000376636 SPART-AS1P0CW21 52 aa9.15□□□□□ -0.94
VPS13A-205ENST00000376636 WDR86Q86TI4 376 aa9.15□□□□□ -0.94
VPS13A-205ENST00000376636 WFDC11Q8NEX6 87 aa9.15□□□□□ -0.94
VPS13A-205ENST00000376636 NCR3O14931 201 aa9.15□□□□□ -0.95
VPS13A-205ENST00000376636 FAM120AOSQ5T036 256 aa9.15□□□□□ -0.95
VPS13A-205ENST00000376636 FANCD2OSQ96PS1 177 aa9.15□□□□□ -0.95
VPS13A-205ENST00000376636 NUP210LQ5VU65 1888 aa9.14□□□□□ -0.95
VPS13A-205ENST00000376636 TANC1Q9C0D5 1861 aa9.14□□□□□ -0.95
VPS13A-205ENST00000376636 C11orf86A6NJI1 115 aa9.14□□□□□ -0.95
VPS13A-205ENST00000376636 C14orf177Q52M58 125 aa9.14□□□□□ -0.95
VPS13A-205ENST00000376636 WT1-ASQ06250 92 aa9.14□□□□□ -0.95
VPS13A-205ENST00000376636 TOMM6Q96B49 74 aa9.14□□□□□ -0.95
VPS13A-205ENST00000376636 C20orf173Q96LM9 149 aa9.14□□□□□ -0.95
VPS13A-205ENST00000376636 K7EN84 100 aa9.14□□□□□ -0.95
VPS13A-205ENST00000376636 GNRH2O43555 120 aa9.14□□□□□ -0.95
VPS13A-205ENST00000376636 C9orf66Q5T8R8 295 aa9.14□□□□□ -0.95
VPS13A-205ENST00000376636 SERP1Q9Y6X1 66 aa9.14□□□□□ -0.95
VPS13A-205ENST00000376636 ZNF726P1Q15940 193 aa9.13□□□□□ -0.95
VPS13A-205ENST00000376636 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.13□□□□□ -0.95
VPS13A-205ENST00000376636 WISP1O95388 367 aa9.13□□□□□ -0.95
VPS13A-205ENST00000376636 COX7BP24311 80 aa9.13□□□□□ -0.95
VPS13A-205ENST00000376636 CCL24O00175 119 aa9.13□□□□□ -0.95
VPS13A-205ENST00000376636 CLEC2BQ92478 149 aa9.13□□□□□ -0.95
VPS13A-205ENST00000376636 WFDC2Q14508 124 aa9.13□□□□□ -0.95
VPS13A-205ENST00000376636 VPREB3Q9UKI3 123 aa9.13□□□□□ -0.95
VPS13A-205ENST00000376636 E7EQL1 145 aa9.13□□□□□ -0.95
VPS13A-205ENST00000376636 RPL39LQ96EH5 51 aaKnown RBP9.13□□□□□ -0.95
VPS13A-205ENST00000376636 CD59P13987 128 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 FLVCR1-AS1Q8TAF5 88 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 PIFOQ8TCI5 191 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 IGKV2D-26A0A0A0MRZ7 120 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 E9PLD3 99 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 C5orf24Q7Z6I8 188 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 Q96MF0 132 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 PRR20EP86478 221 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 PRR20CP86479 221 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 PRR20DP86480 221 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 PRR20BP86481 221 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 PRR20AP86496 221 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 EPOPA6NHQ4 379 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 PCNX3Q9H6A9 2034 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 PRR30Q53SZ7 412 aaPredicted RBP9.12□□□□□ -0.95
VPS13A-205ENST00000376636 MYO18BQ8IUG5 2567 aa9.12□□□□□ -0.95
VPS13A-205ENST00000376636 C16orf54Q6UWD8 224 aa9.11□□□□□ -0.95
VPS13A-205ENST00000376636 HHLA3Q9XRX5 114 aa9.11□□□□□ -0.95
VPS13A-205ENST00000376636 DAND5Q8N907 189 aa9.11□□□□□ -0.95
VPS13A-205ENST00000376636 DOPEY1Q5JWR5 2465 aa9.11□□□□□ -0.95
VPS13A-205ENST00000376636 FXYD2P54710 66 aa9.11□□□□□ -0.95
VPS13A-205ENST00000376636 IGKV1-6A0A0C4DH72 117 aa9.11□□□□□ -0.95
VPS13A-205ENST00000376636 C17orf58Q2M2W7 97 aa9.11□□□□□ -0.95
VPS13A-205ENST00000376636 ZNF491Q8N8L2 437 aa9.1□□□□□ -0.95
VPS13A-205ENST00000376636 LY6HO94772 140 aa9.1□□□□□ -0.95
VPS13A-205ENST00000376636 FOXL2NBQ6ZUU3 175 aa9.1□□□□□ -0.95
VPS13A-205ENST00000376636 C20orf197Q8N268 126 aa9.1□□□□□ -0.95
VPS13A-205ENST00000376636 UNQ6494/PRO21346Q6UXR6 183 aa9.1□□□□□ -0.95
VPS13A-205ENST00000376636 HIST2H2BDQ6DRA6 164 aa9.09□□□□□ -0.95
VPS13A-205ENST00000376636 SPAG11BQ08648 103 aa9.09□□□□□ -0.95
VPS13A-205ENST00000376636 COA6Q5JTJ3 125 aaKnown RBP9.09□□□□□ -0.95
VPS13A-205ENST00000376636 NDUFA11Q86Y39 141 aa9.09□□□□□ -0.95
VPS13A-205ENST00000376636 MLST8Q9BVC4 326 aa9.09□□□□□ -0.95
VPS13A-205ENST00000376636 ZNRD1Q9P1U0 126 aa9.08□□□□□ -0.96
VPS13A-205ENST00000376636 MIAQ16674 131 aa9.08□□□□□ -0.96
VPS13A-205ENST00000376636 KLK5Q9Y337 293 aaPredicted RBP9.08□□□□□ -0.96
VPS13A-205ENST00000376636 MIR7-3HGQ8N6C7 128 aa9.08□□□□□ -0.96
VPS13A-205ENST00000376636 ZNF581Q9P0T4 197 aa9.08□□□□□ -0.96
VPS13A-205ENST00000376636 IGHV3-30P01768 117 aa9.07□□□□□ -0.96
VPS13A-205ENST00000376636 IGHV3-33P01772 117 aa9.07□□□□□ -0.96
VPS13A-205ENST00000376636 IGHV3-30-3P0DP02 117 aa9.07□□□□□ -0.96
VPS13A-205ENST00000376636 IGHV3-30-5P0DP03 117 aa9.07□□□□□ -0.96
VPS13A-205ENST00000376636 F8W735 103 aaPredicted RBP9.07□□□□□ -0.96
VPS13A-205ENST00000376636 SDIM1Q6ZPB5 146 aa9.07□□□□□ -0.96
VPS13A-205ENST00000376636 RNASE8Q8TDE3 154 aaKnown RBP9.07□□□□□ -0.96
VPS13A-205ENST00000376636 ASPHD1Q5U4P2 390 aa9.07□□□□□ -0.96
VPS13A-205ENST00000376636 AGPAT4-IT1Q9H0P7 198 aa9.07□□□□□ -0.96
VPS13A-205ENST00000376636 LYPD6BQ8NI32 183 aa9.06□□□□□ -0.96
VPS13A-205ENST00000376636 A0A0J9YXV3 536 aa9.06□□□□□ -0.96
VPS13A-205ENST00000376636 NDUFA7O95182 113 aa9.06□□□□□ -0.96
VPS13A-205ENST00000376636 C1orf195Q5TG92 126 aa9.06□□□□□ -0.96
VPS13A-205ENST00000376636 WFDC10BQ8IUB3 73 aa9.06□□□□□ -0.96
VPS13A-205ENST00000376636 TEX49A0A1B0GTD5 131 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms