RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 C18orf15Q96N68 181 aa9.03□□□□□ -0.96
CLCN6-205ENST00000376492 A0A1W2PPQ1 181 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 GAGE12BA1L429 117 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 PGPEP1LA6NFU8 196 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 A8MWL6 223 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 SPINK4O60575 86 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 GAGE7O76087 117 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 P01737 135 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 GAGE12FP0CL80 117 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 GAGE12GP0CL81 117 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 GAGE12IP0CL82 117 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 MUC21Q5SSG8 566 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 KCNIP4Q6PIL6 250 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 FAM159AQ6UWV7 190 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 NUDT10Q8NFP7 164 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 NUDT11Q96G61 164 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 MRPS16Q9Y3D3 137 aaKnown RBP9.02□□□□□ -0.97
CLCN6-205ENST00000376492 V9GYV3 84 aa9.02□□□□□ -0.97
CLCN6-205ENST00000376492 GATCO43716 136 aaKnown RBP9.01□□□□□ -0.97
CLCN6-205ENST00000376492 S100PP25815 95 aa9.01□□□□□ -0.97
CLCN6-205ENST00000376492 LINC01559Q495D7 138 aa9.01□□□□□ -0.97
CLCN6-205ENST00000376492 ATRAIDQ6UW56 229 aa9.01□□□□□ -0.97
CLCN6-205ENST00000376492 TSKUQ8WUA8 353 aa9.01□□□□□ -0.97
CLCN6-205ENST00000376492 RPP21Q9H633 154 aaKnown RBP9.01□□□□□ -0.97
CLCN6-205ENST00000376492 MDFICQ9P1T7 246 aa9.01□□□□□ -0.97
CLCN6-205ENST00000376492 FLG2Q5D862 2391 aaPredicted RBP9.01□□□□□ -0.97
CLCN6-205ENST00000376492 TRGV11A0A075B6L2 103 aa9□□□□□ -0.97
CLCN6-205ENST00000376492 TRBV24-1A0A075B6N3 115 aa9□□□□□ -0.97
CLCN6-205ENST00000376492 TRGV1A0A0A0MS02 117 aa9□□□□□ -0.97
CLCN6-205ENST00000376492 SMIM27A0A1W2PRY6 76 aa9□□□□□ -0.97
CLCN6-205ENST00000376492 CRIP1P50238 77 aa9□□□□□ -0.97
CLCN6-205ENST00000376492 ZNF80P51504 273 aaPredicted RBP9□□□□□ -0.97
CLCN6-205ENST00000376492 ZNF415Q09FC8 603 aa9□□□□□ -0.97
CLCN6-205ENST00000376492 DNLZQ5SXM8 178 aa9□□□□□ -0.97
CLCN6-205ENST00000376492 KCNS1Q96KK3 526 aa9□□□□□ -0.97
CLCN6-205ENST00000376492 C8orf49Q96NF6 230 aa9□□□□□ -0.97
CLCN6-205ENST00000376492 IL36BQ9NZH7 164 aa9□□□□□ -0.97
CLCN6-205ENST00000376492 TRGV2A0A075B6R0 118 aa8.99□□□□□ -0.97
CLCN6-205ENST00000376492 GNRH2O43555 120 aa8.99□□□□□ -0.97
CLCN6-205ENST00000376492 COX19Q49B96 90 aa8.99□□□□□ -0.97
CLCN6-205ENST00000376492 RASL11AQ6T310 242 aa8.99□□□□□ -0.97
CLCN6-205ENST00000376492 RASL10AQ92737 203 aa8.99□□□□□ -0.97
CLCN6-205ENST00000376492 SPXQ9BT56 116 aa8.99□□□□□ -0.97
CLCN6-205ENST00000376492 RNASE7Q9H1E1 156 aaKnown RBP8.99□□□□□ -0.97
CLCN6-205ENST00000376492 VPS13BQ7Z7G8 4022 aa8.98□□□□□ -0.97
CLCN6-205ENST00000376492 IGHV3-16A0A0C4DH30 117 aa8.98□□□□□ -0.97
CLCN6-205ENST00000376492 SH2D1AO60880 128 aa8.98□□□□□ -0.97
CLCN6-205ENST00000376492 KRTAP10-1P60331 282 aa8.98□□□□□ -0.97
CLCN6-205ENST00000376492 WDR73Q6P4I2 378 aa8.98□□□□□ -0.97
CLCN6-205ENST00000376492 NHLRC2Q8NBF2 726 aa8.98□□□□□ -0.97
CLCN6-205ENST00000376492 FRZBQ92765 325 aa8.98□□□□□ -0.97
CLCN6-205ENST00000376492 PGPEP1Q9NXJ5 209 aa8.98□□□□□ -0.97
CLCN6-205ENST00000376492 NAT8BQ9UHF3 227 aa8.98□□□□□ -0.97
CLCN6-205ENST00000376492 NAGKQ9UJ70 344 aa8.98□□□□□ -0.97
CLCN6-205ENST00000376492 A0A1B0GW15 77 aa8.97□□□□□ -0.97
CLCN6-205ENST00000376492 F2Z2F3 143 aa8.97□□□□□ -0.97
CLCN6-205ENST00000376492 H3BNG1 76 aa8.97□□□□□ -0.97
CLCN6-205ENST00000376492 TYMSP04818 313 aa8.97□□□□□ -0.97
CLCN6-205ENST00000376492 DNAH10OSP0CZ25 163 aa8.97□□□□□ -0.97
CLCN6-205ENST00000376492 PRR27Q6MZM9 219 aa8.97□□□□□ -0.97
CLCN6-205ENST00000376492 ATP5L2Q7Z4Y8 100 aa8.97□□□□□ -0.97
CLCN6-205ENST00000376492 VSIG2Q96IQ7 327 aa8.97□□□□□ -0.97
CLCN6-205ENST00000376492 YPEL4Q96NS1 127 aa8.97□□□□□ -0.97
CLCN6-205ENST00000376492 MRPL16Q9NX20 251 aaKnown RBP8.97□□□□□ -0.97
CLCN6-205ENST00000376492 C11orf21Q9P2W6 132 aa8.97□□□□□ -0.97
CLCN6-205ENST00000376492 TNFRSF18Q9Y5U5 241 aa8.97□□□□□ -0.97
CLCN6-205ENST00000376492 A0A096LPF7 62 aa8.96□□□□□ -0.98
CLCN6-205ENST00000376492 SMR3BP02814 79 aaPredicted RBP8.96□□□□□ -0.98
CLCN6-205ENST00000376492 HAMPP81172 84 aa8.96□□□□□ -0.98
CLCN6-205ENST00000376492 ELOBQ15370 118 aa8.96□□□□□ -0.98
CLCN6-205ENST00000376492 OR2D3Q8NGH3 330 aa8.96□□□□□ -0.98
CLCN6-205ENST00000376492 CNFNQ9BYD5 112 aa8.96□□□□□ -0.98
CLCN6-205ENST00000376492 SRRM2Q9UQ35 2752 aaKnown RBP8.96□□□□□ -0.98
CLCN6-205ENST00000376492 M0R2P5 195 aa8.95□□□□□ -0.98
CLCN6-205ENST00000376492 CDPF1Q6NVV7 123 aa8.95□□□□□ -0.98
CLCN6-205ENST00000376492 SSBP4Q9BWG4 385 aaPredicted RBP8.95□□□□□ -0.98
CLCN6-205ENST00000376492 IGKV3D-20A0A0C4DH25 116 aa8.94□□□□□ -0.98
CLCN6-205ENST00000376492 COLCA2A8K830 154 aa8.94□□□□□ -0.98
CLCN6-205ENST00000376492 SIVA1O15304 175 aa8.94□□□□□ -0.98
CLCN6-205ENST00000376492 ORM1P02763 201 aa8.94□□□□□ -0.98
CLCN6-205ENST00000376492 S100A8P05109 93 aa8.94□□□□□ -0.98
CLCN6-205ENST00000376492 OR5AL1P0C617 328 aa8.94□□□□□ -0.98
CLCN6-205ENST00000376492 IGLC6P0CF74 106 aa8.94□□□□□ -0.98
CLCN6-205ENST00000376492 SLAQ13239 276 aa8.94□□□□□ -0.98
CLCN6-205ENST00000376492 PIK3CD-AS1Q5SR53 167 aa8.94□□□□□ -0.98
CLCN6-205ENST00000376492 EREGO14944 169 aa8.93□□□□□ -0.98
CLCN6-205ENST00000376492 NXPH4O95158 308 aa8.93□□□□□ -0.98
CLCN6-205ENST00000376492 CTRLP40313 264 aa8.93□□□□□ -0.98
CLCN6-205ENST00000376492 FHL2Q14192 279 aa8.93□□□□□ -0.98
CLCN6-205ENST00000376492 CBLN2Q8IUK8 224 aa8.93□□□□□ -0.98
CLCN6-205ENST00000376492 PTH2Q96A98 100 aa8.93□□□□□ -0.98
CLCN6-205ENST00000376492 C9orf85Q96MD7 179 aa8.93□□□□□ -0.98
CLCN6-205ENST00000376492 A0A087WTM6 91 aa8.92□□□□□ -0.98
CLCN6-205ENST00000376492 HIGD1CA8MV81 97 aa8.92□□□□□ -0.98
CLCN6-205ENST00000376492 SNAI2O43623 268 aa8.92□□□□□ -0.98
CLCN6-205ENST00000376492 IGHV3-53P01767 116 aa8.92□□□□□ -0.98
CLCN6-205ENST00000376492 MT-ND6P03923 174 aa8.92□□□□□ -0.98
CLCN6-205ENST00000376492 RNASE3P12724 160 aaKnown RBP8.92□□□□□ -0.98
CLCN6-205ENST00000376492 NUP35Q8NFH5 326 aa8.92□□□□□ -0.98
CLCN6-205ENST00000376492 BORCS7Q96B45 105 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms