RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 CFC1P0CG37 223 aa12.96□□□□□ -0.33
VARS-215ENST00000375663 CFAP161Q6P656 301 aa12.96□□□□□ -0.33
VARS-215ENST00000375663 IGLC6P0CF74 106 aa12.96□□□□□ -0.34
VARS-215ENST00000375663 EXPH5Q8NEV8 1989 aa12.95□□□□□ -0.34
VARS-215ENST00000375663 TRAV12-1A0A0B4J245 112 aa12.95□□□□□ -0.34
VARS-215ENST00000375663 IGHV3-38A0A0C4DH36 116 aa12.95□□□□□ -0.34
VARS-215ENST00000375663 DEFB1P60022 68 aa12.95□□□□□ -0.34
VARS-215ENST00000375663 RNASE13Q5GAN3 156 aaKnown RBP12.95□□□□□ -0.34
VARS-215ENST00000375663 TCTEX1D4Q5JR98 221 aa12.95□□□□□ -0.34
VARS-215ENST00000375663 NTN5Q8WTR8 489 aaPredicted RBP12.95□□□□□ -0.34
VARS-215ENST00000375663 CRYGBP07316 175 aa12.95□□□□□ -0.34
VARS-215ENST00000375663 XCL2Q9UBD3 114 aa12.95□□□□□ -0.34
VARS-215ENST00000375663 COL5A1P20908 1838 aaPredicted RBP12.95□□□□□ -0.34
VARS-215ENST00000375663 ZFP2Q6ZN57 461 aa12.94□□□□□ -0.34
VARS-215ENST00000375663 TMEM86BQ8N661 226 aa12.94□□□□□ -0.34
VARS-215ENST00000375663 GATD1Q8NB37 220 aa12.94□□□□□ -0.34
VARS-215ENST00000375663 MTORP42345 2549 aa12.94□□□□□ -0.34
VARS-215ENST00000375663 IGLV2-11P01706 119 aa12.94□□□□□ -0.34
VARS-215ENST00000375663 LEPROTO15243 131 aa12.94□□□□□ -0.34
VARS-215ENST00000375663 RHOHQ15669 191 aa12.94□□□□□ -0.34
VARS-215ENST00000375663 SUMO4Q6EEV6 95 aa12.94□□□□□ -0.34
VARS-215ENST00000375663 ZFP36P26651 326 aaKnown RBP12.93□□□□□ -0.34
VARS-215ENST00000375663 E9PLD3 99 aa12.93□□□□□ -0.34
VARS-215ENST00000375663 H3BUA1 57 aa12.93□□□□□ -0.34
VARS-215ENST00000375663 C1QTNF4Q9BXJ3 329 aa12.93□□□□□ -0.34
VARS-215ENST00000375663 RPL39P62891 51 aaKnown RBP12.93□□□□□ -0.34
VARS-215ENST00000375663 BAALCQ8WXS3 180 aa12.93□□□□□ -0.34
VARS-215ENST00000375663 POLQO75417 2590 aa12.92□□□□□ -0.34
VARS-215ENST00000375663 SRSF2Q01130 221 aaKnown RBP12.92□□□□□ -0.34
VARS-215ENST00000375663 LINC01356Q8N9X3 169 aa12.92□□□□□ -0.34
VARS-215ENST00000375663 BLCAPP62952 87 aa12.92□□□□□ -0.34
VARS-215ENST00000375663 TOMM6Q96B49 74 aa12.92□□□□□ -0.34
VARS-215ENST00000375663 C11orf68Q9H3H3 251 aaKnown RBP12.92□□□□□ -0.34
VARS-215ENST00000375663 A4D1N5 150 aa12.91□□□□□ -0.34
VARS-215ENST00000375663 AJUBAQ96IF1 538 aa12.91□□□□□ -0.34
VARS-215ENST00000375663 A0A0J9YXV3 536 aa12.91□□□□□ -0.34
VARS-215ENST00000375663 GATA3P23771 443 aa12.91□□□□□ -0.34
VARS-215ENST00000375663 C5orf56Q8N8D9 126 aa12.91□□□□□ -0.34
VARS-215ENST00000375663 XIRP2A4UGR9 3374 aa12.91□□□□□ -0.34
VARS-215ENST00000375663 C11orf86A6NJI1 115 aa12.9□□□□□ -0.34
VARS-215ENST00000375663 Q8NA96 180 aa12.9□□□□□ -0.34
VARS-215ENST00000375663 ZNRF2Q8NHG8 242 aa12.9□□□□□ -0.34
VARS-215ENST00000375663 PRUNE2Q8WUY3 3088 aa12.9□□□□□ -0.34
VARS-215ENST00000375663 IGKV2D-26A0A0A0MRZ7 120 aa12.9□□□□□ -0.34
VARS-215ENST00000375663 MALP21145 153 aa12.9□□□□□ -0.34
VARS-215ENST00000375663 C6orf226Q5I0X4 101 aa12.89□□□□□ -0.35
VARS-215ENST00000375663 C2orf91Q6ZV80 131 aa12.89□□□□□ -0.35
VARS-215ENST00000375663 TEN1Q86WV5 123 aa12.89□□□□□ -0.35
VARS-215ENST00000375663 LGALS1P09382 135 aaKnown RBP12.89□□□□□ -0.35
VARS-215ENST00000375663 GAGE12JA6NER3 117 aa12.89□□□□□ -0.35
VARS-215ENST00000375663 GAGE4Q13068 117 aa12.89□□□□□ -0.35
VARS-215ENST00000375663 GAGE5Q13069 117 aa12.89□□□□□ -0.35
VARS-215ENST00000375663 URB1-AS1Q96HZ7 61 aa12.89□□□□□ -0.35
VARS-215ENST00000375663 CARD19Q96LW7 228 aa12.89□□□□□ -0.35
VARS-215ENST00000375663 GAGE2AQ6NT46 116 aa12.88□□□□□ -0.35
VARS-215ENST00000375663 RPL35AP18077 110 aaKnown RBP12.88□□□□□ -0.35
VARS-215ENST00000375663 UNQ9165/PRO28630Q6UXU0 137 aa12.87□□□□□ -0.35
VARS-215ENST00000375663 IGHV4-61A0A0C4DH41 118 aa12.87□□□□□ -0.35
VARS-215ENST00000375663 FOXI1Q12951 378 aa12.87□□□□□ -0.35
VARS-215ENST00000375663 NSUN5P1Q3KNT7 163 aa12.87□□□□□ -0.35
VARS-215ENST00000375663 CCDC140Q96MF4 163 aa12.87□□□□□ -0.35
VARS-215ENST00000375663 IGHV4-38-2P0DP08 117 aa12.86□□□□□ -0.35
VARS-215ENST00000375663 MUSTN1Q8IVN3 82 aa12.86□□□□□ -0.35
VARS-215ENST00000375663 SIRPDQ9H106 197 aa12.86□□□□□ -0.35
VARS-215ENST00000375663 U3KQK5 164 aa12.86□□□□□ -0.35
VARS-215ENST00000375663 ODF3BA8MYP8 253 aa12.86□□□□□ -0.35
VARS-215ENST00000375663 RNF223E7ERA6 249 aa12.86□□□□□ -0.35
VARS-215ENST00000375663 ADORA2A-AS1P86434 159 aa12.86□□□□□ -0.35
VARS-215ENST00000375663 TM2D2Q9BX73 214 aa12.86□□□□□ -0.35
VARS-215ENST00000375663 LINC01548A6NM66 108 aa12.85□□□□□ -0.35
VARS-215ENST00000375663 IFITM1P13164 125 aa12.85□□□□□ -0.35
VARS-215ENST00000375663 ANKRD29Q8N6D5 301 aa12.85□□□□□ -0.35
VARS-215ENST00000375663 TRANK1O15050 2925 aa12.85□□□□□ -0.35
VARS-215ENST00000375663 CMC4P56277 68 aaPredicted RBP12.85□□□□□ -0.35
VARS-215ENST00000375663 C15orf53Q8NAA6 179 aa12.85□□□□□ -0.35
VARS-215ENST00000375663 TIMM17AQ99595 171 aa12.85□□□□□ -0.35
VARS-215ENST00000375663 IGHV4-59P01825 116 aa12.85□□□□□ -0.35
VARS-215ENST00000375663 JPT2Q9H910 190 aa12.85□□□□□ -0.35
VARS-215ENST00000375663 TRIOO75962 3097 aa12.85□□□□□ -0.35
VARS-215ENST00000375663 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.84□□□□□ -0.35
VARS-215ENST00000375663 IGKV2-29A2NJV5 120 aaPredicted RBP12.84□□□□□ -0.35
VARS-215ENST00000375663 PTH2Q96A98 100 aa12.84□□□□□ -0.35
VARS-215ENST00000375663 SPAG8Q99932 426 aaPredicted RBP12.84□□□□□ -0.35
VARS-215ENST00000375663 LINC01619G3V211 115 aa12.84□□□□□ -0.35
VARS-215ENST00000375663 LY6LH3BQJ8 138 aa12.84□□□□□ -0.35
VARS-215ENST00000375663 TRBV12-3P01733 135 aa12.84□□□□□ -0.35
VARS-215ENST00000375663 MED14OSP0DP75 135 aa12.84□□□□□ -0.35
VARS-215ENST00000375663 FBXL19-AS1Q494R0 122 aa12.84□□□□□ -0.35
VARS-215ENST00000375663 RNF185Q96GF1 192 aa12.84□□□□□ -0.35
VARS-215ENST00000375663 ELANEP08246 267 aa12.84□□□□□ -0.35
VARS-215ENST00000375663 INAFM2P0DMQ5 153 aa12.84□□□□□ -0.35
VARS-215ENST00000375663 NBL1P41271 181 aa12.84□□□□□ -0.35
VARS-215ENST00000375663 Q8N1Y9 231 aa12.83□□□□□ -0.36
VARS-215ENST00000375663 OVOL2Q9BRP0 275 aa12.83□□□□□ -0.36
VARS-215ENST00000375663 HIST1H4AP62805 103 aaKnown RBP12.83□□□□□ -0.36
VARS-215ENST00000375663 S100A7L2Q5SY68 101 aa12.83□□□□□ -0.36
VARS-215ENST00000375663 SZT2Q5T011 3432 aa12.83□□□□□ -0.36
VARS-215ENST00000375663 HOXD3P31249 432 aaPredicted RBP12.83□□□□□ -0.36
VARS-215ENST00000375663 PRO3102Q9H379 93 aa12.83□□□□□ -0.36
VARS-215ENST00000375663 CFHR3Q02985 330 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms