RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 IGKV1-17P01599 117 aa9.31□□□□□ -0.92
C9orf3-203ENST00000375315 TIMM23O14925 209 aa9.3□□□□□ -0.92
C9orf3-203ENST00000375315 BRD3OSQ6XYD6 125 aa9.3□□□□□ -0.92
C9orf3-203ENST00000375315 NEXN-AS1Q8NBZ9 246 aa9.3□□□□□ -0.92
C9orf3-203ENST00000375315 RNF125Q96EQ8 232 aa9.3□□□□□ -0.92
C9orf3-203ENST00000375315 TEX15Q9BXT5 2789 aa9.3□□□□□ -0.92
C9orf3-203ENST00000375315 RPL13AP40429 203 aaKnown RBP9.3□□□□□ -0.92
C9orf3-203ENST00000375315 HERVK_113P61574 105 aa9.3□□□□□ -0.92
C9orf3-203ENST00000375315 ORMDL2Q53FV1 153 aa9.3□□□□□ -0.92
C9orf3-203ENST00000375315 NRACQ8N912 160 aa9.3□□□□□ -0.92
C9orf3-203ENST00000375315 Q8TAT8 98 aa9.3□□□□□ -0.92
C9orf3-203ENST00000375315 LINC01587Q99440 93 aa9.3□□□□□ -0.92
C9orf3-203ENST00000375315 A0A0J9YY99 117 aa9.29□□□□□ -0.92
C9orf3-203ENST00000375315 BUB1B-PAK6H3BSN5 160 aa9.29□□□□□ -0.92
C9orf3-203ENST00000375315 KLK15Q9H2R5 256 aa9.29□□□□□ -0.92
C9orf3-203ENST00000375315 CRIP2P52943 208 aaPredicted RBP9.29□□□□□ -0.92
C9orf3-203ENST00000375315 MRGPRG-AS1Q2M3A8 158 aa9.29□□□□□ -0.92
C9orf3-203ENST00000375315 TRPT1Q86TN4 253 aaKnown RBP9.29□□□□□ -0.92
C9orf3-203ENST00000375315 DUSP14O95147 198 aaKnown RBP9.29□□□□□ -0.92
C9orf3-203ENST00000375315 ATXN8Q156A1 80 aa9.29□□□□□ -0.92
C9orf3-203ENST00000375315 C21orf62Q9NYP8 219 aa9.29□□□□□ -0.92
C9orf3-203ENST00000375315 IGHV1-3A0A0C4DH29 117 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 H3BMM0 161 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 I3L2K1 104 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 C3orf56Q8N813 242 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 ZNF491Q8N8L2 437 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 KLHL30-AS1Q8NEE0 82 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 TOMM6Q96B49 74 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 CHCHD5Q9BSY4 110 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 MYO9AB2RTY4 2548 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 IGHV3-30P01768 117 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 IGHV3-30-5P0DP03 117 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 RPL7P18124 248 aaKnown RBP9.28□□□□□ -0.92
C9orf3-203ENST00000375315 LMO4P61968 165 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 IL17RELQ6ZVW7 336 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 DYNAPQ8N1N2 210 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 SMIM2Q9BVW6 85 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 S4R3C0 116 aa9.28□□□□□ -0.92
C9orf3-203ENST00000375315 P0DMU3 169 aa9.27□□□□□ -0.92
C9orf3-203ENST00000375315 FAM231AP0DMU4 169 aa9.27□□□□□ -0.92
C9orf3-203ENST00000375315 FAM231CP0DMU5 169 aa9.27□□□□□ -0.92
C9orf3-203ENST00000375315 LINC01620Q4KN68 170 aa9.27□□□□□ -0.92
C9orf3-203ENST00000375315 TRAV26-2A0A0B4J265 109 aa9.27□□□□□ -0.93
C9orf3-203ENST00000375315 TEX49A0A1B0GTD5 131 aa9.27□□□□□ -0.93
C9orf3-203ENST00000375315 LGALS9O00182 355 aa9.27□□□□□ -0.93
C9orf3-203ENST00000375315 ZNF575Q86XF7 245 aa9.27□□□□□ -0.93
C9orf3-203ENST00000375315 IGLV1-47P01700 117 aa9.27□□□□□ -0.93
C9orf3-203ENST00000375315 TRGV3P03979 118 aa9.27□□□□□ -0.93
C9orf3-203ENST00000375315 PIMREGQ9BSJ6 248 aa9.27□□□□□ -0.93
C9orf3-203ENST00000375315 FLNAP21333 2647 aaKnown RBP9.26□□□□□ -0.93
C9orf3-203ENST00000375315 ITPR3Q14573 2671 aa9.26□□□□□ -0.93
C9orf3-203ENST00000375315 BAALCQ8WXS3 180 aa9.26□□□□□ -0.93
C9orf3-203ENST00000375315 DPM3Q9P2X0 92 aa9.26□□□□□ -0.93
C9orf3-203ENST00000375315 LINC00694P0DN24 101 aa9.26□□□□□ -0.93
C9orf3-203ENST00000375315 ERCC8Q13216 396 aa9.26□□□□□ -0.93
C9orf3-203ENST00000375315 PAPPA-AS1Q5QFB9 102 aa9.26□□□□□ -0.93
C9orf3-203ENST00000375315 LINC00311Q8N616 119 aa9.26□□□□□ -0.93
C9orf3-203ENST00000375315 LINC01600Q96MT4 127 aa9.26□□□□□ -0.93
C9orf3-203ENST00000375315 TRBV10-2A0A0K0K1G8 114 aa9.25□□□□□ -0.93
C9orf3-203ENST00000375315 SLC25A29Q8N8R3 303 aa9.25□□□□□ -0.93
C9orf3-203ENST00000375315 SMIM9A6NGZ8 99 aa9.25□□□□□ -0.93
C9orf3-203ENST00000375315 IGHV3-33P01772 117 aa9.25□□□□□ -0.93
C9orf3-203ENST00000375315 ZNF56Q15929 161 aa9.25□□□□□ -0.93
C9orf3-203ENST00000375315 Q1RN00 199 aa9.25□□□□□ -0.93
C9orf3-203ENST00000375315 SIGLEC9Q9Y336 463 aa9.25□□□□□ -0.93
C9orf3-203ENST00000375315 TEX22C9J3V5 150 aa9.25□□□□□ -0.93
C9orf3-203ENST00000375315 C9orf153Q5TBE3 101 aa9.25□□□□□ -0.93
C9orf3-203ENST00000375315 TMEM219Q86XT9 240 aa9.25□□□□□ -0.93
C9orf3-203ENST00000375315 TMEM101Q96IK0 257 aa9.25□□□□□ -0.93
C9orf3-203ENST00000375315 KMT2BQ9UMN6 2715 aaPredicted RBP9.25□□□□□ -0.93
C9orf3-203ENST00000375315 RNF223E7ERA6 249 aa9.24□□□□□ -0.93
C9orf3-203ENST00000375315 H7C2G1 150 aa9.24□□□□□ -0.93
C9orf3-203ENST00000375315 EMP1P54849 157 aa9.24□□□□□ -0.93
C9orf3-203ENST00000375315 TRBV7-7A0A0K0K1E9 115 aa9.24□□□□□ -0.93
C9orf3-203ENST00000375315 SAA4P35542 130 aa9.24□□□□□ -0.93
C9orf3-203ENST00000375315 C2orf66Q6UXQ4 117 aa9.24□□□□□ -0.93
C9orf3-203ENST00000375315 C8orf31Q8N9H6 132 aa9.24□□□□□ -0.93
C9orf3-203ENST00000375315 LY6G5BQ8NDX9 201 aa9.24□□□□□ -0.93
C9orf3-203ENST00000375315 FAM240AA0A1B0GVK7 77 aa9.23□□□□□ -0.93
C9orf3-203ENST00000375315 J3KT08 172 aa9.23□□□□□ -0.93
C9orf3-203ENST00000375315 LY6EQ16553 131 aa9.23□□□□□ -0.93
C9orf3-203ENST00000375315 Q6ZS46 218 aa9.23□□□□□ -0.93
C9orf3-203ENST00000375315 LRRC75A-AS1Q8N1F1 130 aa9.23□□□□□ -0.93
C9orf3-203ENST00000375315 SPANXDQ9BXN6 97 aa9.23□□□□□ -0.93
C9orf3-203ENST00000375315 LINC00527Q9UJ94 153 aa9.23□□□□□ -0.93
C9orf3-203ENST00000375315 M0R2P5 195 aa9.23□□□□□ -0.93
C9orf3-203ENST00000375315 SPANXN1Q5VSR9 72 aa9.23□□□□□ -0.93
C9orf3-203ENST00000375315 C10orf105Q8TEF2 133 aa9.23□□□□□ -0.93
C9orf3-203ENST00000375315 UNC79Q9P2D8 2635 aa9.23□□□□□ -0.93
C9orf3-203ENST00000375315 A0A0B4J2C4 111 aa9.22□□□□□ -0.93
C9orf3-203ENST00000375315 A4D1N5 150 aa9.22□□□□□ -0.93
C9orf3-203ENST00000375315 K7EIM0 57 aa9.22□□□□□ -0.93
C9orf3-203ENST00000375315 NDUFA7O95182 113 aa9.22□□□□□ -0.93
C9orf3-203ENST00000375315 CRYGBP07316 175 aa9.22□□□□□ -0.93
C9orf3-203ENST00000375315 C2orf82Q6UX34 121 aa9.22□□□□□ -0.93
C9orf3-203ENST00000375315 CFHR4Q92496 578 aa9.22□□□□□ -0.93
C9orf3-203ENST00000375315 PSMG3-AS1Q96PY0 264 aa9.22□□□□□ -0.93
C9orf3-203ENST00000375315 SLC50A1Q9BRV3 221 aa9.22□□□□□ -0.93
C9orf3-203ENST00000375315 NPFFO15130 113 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms