RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 LINC01619G3V211 115 aa13.88□□□□□ -0.19
USP49-202ENST00000373010 PTTG1IPP53801 180 aa13.88□□□□□ -0.19
USP49-202ENST00000373010 TENM4Q6N022 2769 aa13.87□□□□□ -0.19
USP49-202ENST00000373010 PPP1R17O96001 155 aa13.87□□□□□ -0.19
USP49-202ENST00000373010 FAM74A4Q5TZK3 123 aa13.87□□□□□ -0.19
USP49-202ENST00000373010 C2orf66Q6UXQ4 117 aa13.87□□□□□ -0.19
USP49-202ENST00000373010 SIVA1O15304 175 aa13.86□□□□□ -0.19
USP49-202ENST00000373010 UBE2V1Q13404 147 aa13.86□□□□□ -0.19
USP49-202ENST00000373010 K7EMI3 77 aa13.85□□□□□ -0.19
USP49-202ENST00000373010 DEFB131AP59861 70 aa13.85□□□□□ -0.19
USP49-202ENST00000373010 VAMP3Q15836 100 aa13.85□□□□□ -0.19
USP49-202ENST00000373010 FOSL1P15407 271 aa13.85□□□□□ -0.19
USP49-202ENST00000373010 HSD52Q0P140 79 aa13.85□□□□□ -0.19
USP49-202ENST00000373010 RBMY1A1P0DJD3 496 aaKnown RBP13.84□□□□□ -0.19
USP49-202ENST00000373010 RBMY1CP0DJD4 496 aa13.84□□□□□ -0.19
USP49-202ENST00000373010 SEC11AP67812 179 aa13.84□□□□□ -0.19
USP49-202ENST00000373010 RBMY1FQ15415 496 aaKnown RBP13.84□□□□□ -0.19
USP49-202ENST00000373010 C4orf3Q8WVX3 66 aa13.84□□□□□ -0.19
USP49-202ENST00000373010 TRAV12-1A0A0B4J245 112 aa13.84□□□□□ -0.19
USP49-202ENST00000373010 H7C1H1 209 aa13.84□□□□□ -0.19
USP49-202ENST00000373010 TMEM61Q8N0U2 210 aa13.84□□□□□ -0.19
USP49-202ENST00000373010 NEXN-AS1Q8NBZ9 246 aa13.84□□□□□ -0.19
USP49-202ENST00000373010 KLHL30-AS1Q8NEE0 82 aa13.84□□□□□ -0.19
USP49-202ENST00000373010 DLX4Q92988 240 aaPredicted RBP13.84□□□□□ -0.19
USP49-202ENST00000373010 CCDC168Q8NDH2 2452 aa13.84□□□□□ -0.19
USP49-202ENST00000373010 F8VRH5 84 aa13.83□□□□□ -0.2
USP49-202ENST00000373010 PLNP26678 52 aa13.83□□□□□ -0.2
USP49-202ENST00000373010 POLR2KP53803 58 aaKnown RBP13.83□□□□□ -0.2
USP49-202ENST00000373010 Q6ZSV7 163 aa13.83□□□□□ -0.2
USP49-202ENST00000373010 SYT8Q8NBV8 401 aa13.83□□□□□ -0.2
USP49-202ENST00000373010 BAALCQ8WXS3 180 aa13.83□□□□□ -0.2
USP49-202ENST00000373010 CHTOPQ9Y3Y2 248 aaKnown RBP13.83□□□□□ -0.2
USP49-202ENST00000373010 FLNAP21333 2647 aaKnown RBP13.83□□□□□ -0.2
USP49-202ENST00000373010 CRYGDP07320 174 aa13.81□□□□□ -0.2
USP49-202ENST00000373010 HTN1P15515 57 aa13.81□□□□□ -0.2
USP49-202ENST00000373010 ZNF56Q15929 161 aa13.81□□□□□ -0.2
USP49-202ENST00000373010 PEMTQ9UBM1 199 aa13.81□□□□□ -0.2
USP49-202ENST00000373010 RBMY1BA6NDE4 496 aaKnown RBP13.81□□□□□ -0.2
USP49-202ENST00000373010 RBMY1EA6NEQ0 496 aaKnown RBP13.81□□□□□ -0.2
USP49-202ENST00000373010 DNAJC9-AS1A6NH13 148 aa13.81□□□□□ -0.2
USP49-202ENST00000373010 RBMY1DP0C7P1 496 aaKnown RBP13.81□□□□□ -0.2
USP49-202ENST00000373010 HLA-DRB4P13762 266 aa13.81□□□□□ -0.2
USP49-202ENST00000373010 RPL32P62910 135 aaKnown RBP13.81□□□□□ -0.2
USP49-202ENST00000373010 ZFP2Q6ZN57 461 aa13.81□□□□□ -0.2
USP49-202ENST00000373010 MAPKAPK5-AS1Q8N8E1 139 aa13.81□□□□□ -0.2
USP49-202ENST00000373010 HLA-DRB4X5D2U9 266 aa13.81□□□□□ -0.2
USP49-202ENST00000373010 TRAV8-6A0A0B4J262 113 aa13.8□□□□□ -0.2
USP49-202ENST00000373010 SDHAF1A6NFY7 115 aa13.8□□□□□ -0.2
USP49-202ENST00000373010 MORN3Q6PF18 240 aaPredicted RBP13.8□□□□□ -0.2
USP49-202ENST00000373010 TRBV25-1A0A075B6N4 114 aa13.8□□□□□ -0.2
USP49-202ENST00000373010 H3BMM0 161 aa13.8□□□□□ -0.2
USP49-202ENST00000373010 ZNF876PQ49A33 203 aa13.8□□□□□ -0.2
USP49-202ENST00000373010 AMMECR1LQ6DCA0 310 aa13.8□□□□□ -0.2
USP49-202ENST00000373010 TP53TG1Q9Y2A0 90 aa13.8□□□□□ -0.2
USP49-202ENST00000373010 PRSS29PA6NIE9 313 aa13.79□□□□□ -0.2
USP49-202ENST00000373010 VCYO14598 125 aa13.79□□□□□ -0.2
USP49-202ENST00000373010 PRM2P04554 102 aa13.79□□□□□ -0.2
USP49-202ENST00000373010 TMEM86BQ8N661 226 aa13.79□□□□□ -0.2
USP49-202ENST00000373010 C11orf44Q8N8P7 122 aa13.79□□□□□ -0.2
USP49-202ENST00000373010 AKAP9Q99996 3911 aa13.79□□□□□ -0.2
USP49-202ENST00000373010 A6NDN8 102 aa13.79□□□□□ -0.2
USP49-202ENST00000373010 M0QY20 66 aa13.79□□□□□ -0.2
USP49-202ENST00000373010 RPL39P62891 51 aaKnown RBP13.79□□□□□ -0.2
USP49-202ENST00000373010 DYNLRB2Q8TF09 96 aa13.79□□□□□ -0.2
USP49-202ENST00000373010 CHAC1Q9BUX1 264 aa13.79□□□□□ -0.2
USP49-202ENST00000373010 CYSLTR1Q9Y271 337 aa13.79□□□□□ -0.2
USP49-202ENST00000373010 TRGV11A0A075B6L2 103 aa13.78□□□□□ -0.2
USP49-202ENST00000373010 ESM1Q9NQ30 184 aa13.78□□□□□ -0.2
USP49-202ENST00000373010 HIGD1BQ9P298 99 aa13.78□□□□□ -0.2
USP49-202ENST00000373010 ZNF256Q9Y2P7 627 aaPredicted RBP13.78□□□□□ -0.2
USP49-202ENST00000373010 NF1P21359 2839 aa13.78□□□□□ -0.2
USP49-202ENST00000373010 CHD6Q8TD26 2715 aa13.78□□□□□ -0.2
USP49-202ENST00000373010 K7EP13 123 aa13.78□□□□□ -0.2
USP49-202ENST00000373010 TSHBP01222 138 aa13.78□□□□□ -0.2
USP49-202ENST00000373010 KIR2DL4Q99706 377 aa13.78□□□□□ -0.2
USP49-202ENST00000373010 TRBV6-5A0A0K0K1A5 114 aa13.76□□□□□ -0.21
USP49-202ENST00000373010 MAP6D1Q9H9H5 199 aa13.76□□□□□ -0.21
USP49-202ENST00000373010 TRBV27A0A0K0K1C4 114 aa13.76□□□□□ -0.21
USP49-202ENST00000373010 A0A1W2PRX2 142 aa13.76□□□□□ -0.21
USP49-202ENST00000373010 A8MTW9 85 aa13.76□□□□□ -0.21
USP49-202ENST00000373010 GCSHP23434 173 aa13.76□□□□□ -0.21
USP49-202ENST00000373010 DEFB114Q30KQ6 69 aa13.76□□□□□ -0.21
USP49-202ENST00000373010 TRAV2A0A0B4J234 112 aa13.75□□□□□ -0.21
USP49-202ENST00000373010 IGIPA6NJ69 53 aa13.75□□□□□ -0.21
USP49-202ENST00000373010 CD300EQ496F6 205 aaPredicted RBP13.75□□□□□ -0.21
USP49-202ENST00000373010 OR4C5Q8NGB2 326 aa13.75□□□□□ -0.21
USP49-202ENST00000373010 NAA38Q9BRA0 125 aaKnown RBP13.75□□□□□ -0.21
USP49-202ENST00000373010 H3BRM9 83 aa13.75□□□□□ -0.21
USP49-202ENST00000373010 RAB37Q96AX2 223 aa13.75□□□□□ -0.21
USP49-202ENST00000373010 PDZD2O15018 2839 aa13.75□□□□□ -0.21
USP49-202ENST00000373010 FXYD2P54710 66 aa13.74□□□□□ -0.21
USP49-202ENST00000373010 RAX2Q96IS3 184 aa13.74□□□□□ -0.21
USP49-202ENST00000373010 WNK1Q9H4A3 2382 aa13.74□□□□□ -0.21
USP49-202ENST00000373010 IGHV3-73A0A0B4J1V6 119 aa13.73□□□□□ -0.21
USP49-202ENST00000373010 EMP1P54849 157 aa13.73□□□□□ -0.21
USP49-202ENST00000373010 RIPPLY3P57055 190 aa13.73□□□□□ -0.21
USP49-202ENST00000373010 TRPT1Q86TN4 253 aaKnown RBP13.73□□□□□ -0.21
USP49-202ENST00000373010 TEX29Q8N6K0 151 aa13.73□□□□□ -0.21
USP49-202ENST00000373010 JMJD8Q96S16 334 aa13.73□□□□□ -0.21
USP49-202ENST00000373010 C9orf118A6NHY6 69 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms