RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 COX8CQ7Z4L0 72 aa8.64□□□□□ -1.03
RPF1-201ENST00000370654 NIT1Q86X76 327 aa8.64□□□□□ -1.03
RPF1-201ENST00000370654 INO80EQ8NBZ0 244 aaPredicted RBP8.64□□□□□ -1.03
RPF1-201ENST00000370654 TRAV8-3A0A0A6YYJ7 113 aa8.63□□□□□ -1.03
RPF1-201ENST00000370654 BORCS7-ASMTA0A0B4J1R7 106 aa8.63□□□□□ -1.03
RPF1-201ENST00000370654 C1QBP02746 253 aa8.63□□□□□ -1.03
RPF1-201ENST00000370654 FHITP49789 147 aa8.63□□□□□ -1.03
RPF1-201ENST00000370654 SFRP2Q96HF1 295 aa8.63□□□□□ -1.03
RPF1-201ENST00000370654 KLK12Q9UKR0 248 aa8.63□□□□□ -1.03
RPF1-201ENST00000370654 LRP1Q07954 4544 aaKnown RBP8.62□□□□□ -1.03
RPF1-201ENST00000370654 MAP1LC3B2A6NCE7 125 aa8.62□□□□□ -1.03
RPF1-201ENST00000370654 SMLR1H3BR10 107 aa8.62□□□□□ -1.03
RPF1-201ENST00000370654 M0R381 172 aa8.62□□□□□ -1.03
RPF1-201ENST00000370654 ZNF674Q2M3X9 581 aa8.62□□□□□ -1.03
RPF1-201ENST00000370654 LINC00528Q8N1L1 170 aa8.62□□□□□ -1.03
RPF1-201ENST00000370654 OR11H4Q8NGC9 324 aa8.62□□□□□ -1.03
RPF1-201ENST00000370654 HIST1H2BAQ96A08 127 aa8.62□□□□□ -1.03
RPF1-201ENST00000370654 MAP1LC3BQ9GZQ8 125 aa8.62□□□□□ -1.03
RPF1-201ENST00000370654 LTAP01374 205 aa8.61□□□□□ -1.03
RPF1-201ENST00000370654 RPL19P84098 196 aaKnown RBP8.61□□□□□ -1.03
RPF1-201ENST00000370654 LINC01559Q495D7 138 aa8.61□□□□□ -1.03
RPF1-201ENST00000370654 AKR1C8PQ5T2L2 129 aa8.61□□□□□ -1.03
RPF1-201ENST00000370654 FAM162BQ5T6X4 162 aa8.61□□□□□ -1.03
RPF1-201ENST00000370654 ZFP30Q9Y2G7 519 aa8.61□□□□□ -1.03
RPF1-201ENST00000370654 IGKV2D-24A0A075B6R9 120 aa8.61□□□□□ -1.03
RPF1-201ENST00000370654 A0A087WWC5 75 aa8.61□□□□□ -1.03
RPF1-201ENST00000370654 RHODO00212 210 aa8.61□□□□□ -1.03
RPF1-201ENST00000370654 KRTAP10-4P60372 401 aaPredicted RBP8.61□□□□□ -1.03
RPF1-201ENST00000370654 SCXQ7RTU7 201 aa8.61□□□□□ -1.03
RPF1-201ENST00000370654 SYT8Q8NBV8 401 aa8.61□□□□□ -1.03
RPF1-201ENST00000370654 FMC1Q96HJ9 113 aa8.61□□□□□ -1.03
RPF1-201ENST00000370654 PHLDA3Q9Y5J5 127 aa8.61□□□□□ -1.03
RPF1-201ENST00000370654 MUC21A0A0G2JKD1 596 aa8.6□□□□□ -1.03
RPF1-201ENST00000370654 TRBV6-1A0A0K0K1D8 114 aa8.6□□□□□ -1.03
RPF1-201ENST00000370654 MUC21A0A140T8X8 626 aa8.6□□□□□ -1.03
RPF1-201ENST00000370654 ARPC5O15511 151 aa8.6□□□□□ -1.03
RPF1-201ENST00000370654 UBE2D3P61077 147 aa8.6□□□□□ -1.03
RPF1-201ENST00000370654 UBE2D2P62837 147 aa8.6□□□□□ -1.03
RPF1-201ENST00000370654 CST9LP1Q5W188 147 aa8.6□□□□□ -1.03
RPF1-201ENST00000370654 UBE2WQ96B02 151 aa8.6□□□□□ -1.03
RPF1-201ENST00000370654 NKX6-2Q9C056 277 aaPredicted RBP8.6□□□□□ -1.03
RPF1-201ENST00000370654 PAGE4O60829 102 aa8.59□□□□□ -1.03
RPF1-201ENST00000370654 TPT1P13693 172 aaKnown RBP8.59□□□□□ -1.03
RPF1-201ENST00000370654 UBE2G1P62253 170 aa8.59□□□□□ -1.03
RPF1-201ENST00000370654 TOR2AQ5JU69 321 aa8.59□□□□□ -1.03
RPF1-201ENST00000370654 OR10AG1Q8NH19 301 aa8.59□□□□□ -1.03
RPF1-201ENST00000370654 BATF3Q9NR55 127 aa8.59□□□□□ -1.03
RPF1-201ENST00000370654 FAT3Q8TDW7 4589 aa8.58□□□□□ -1.04
RPF1-201ENST00000370654 A0A1B0GV50 99 aa8.58□□□□□ -1.04
RPF1-201ENST00000370654 RBFOX3A6NFN3 312 aa8.58□□□□□ -1.04
RPF1-201ENST00000370654 J3QL48 77 aa8.58□□□□□ -1.04
RPF1-201ENST00000370654 ENHOQ6UWT2 76 aa8.58□□□□□ -1.04
RPF1-201ENST00000370654 ZFP82Q8N141 532 aa8.58□□□□□ -1.04
RPF1-201ENST00000370654 NEXN-AS1Q8NBZ9 246 aa8.58□□□□□ -1.04
RPF1-201ENST00000370654 SCO2A0A1W2PP80 73 aa8.57□□□□□ -1.04
RPF1-201ENST00000370654 PLA2G1BP04054 148 aaKnown RBP8.57□□□□□ -1.04
RPF1-201ENST00000370654 AKR1C3P42330 323 aa8.57□□□□□ -1.04
RPF1-201ENST00000370654 ATRAIDQ6UW56 229 aa8.57□□□□□ -1.04
RPF1-201ENST00000370654 Q8N976 141 aa8.57□□□□□ -1.04
RPF1-201ENST00000370654 URGCP-MRPS24S4R325 110 aa8.57□□□□□ -1.04
RPF1-201ENST00000370654 TRBV7-3A0A075B6L6 115 aa8.56□□□□□ -1.04
RPF1-201ENST00000370654 TRBV10-1A0A0K0K1A3 114 aa8.56□□□□□ -1.04
RPF1-201ENST00000370654 KRTAP29-1A8MX34 341 aaPredicted RBP8.56□□□□□ -1.04
RPF1-201ENST00000370654 RPL36AP83881 106 aaKnown RBP8.56□□□□□ -1.04
RPF1-201ENST00000370654 MPV17L2Q567V2 206 aa8.56□□□□□ -1.04
RPF1-201ENST00000370654 PRR27Q6MZM9 219 aa8.56□□□□□ -1.04
RPF1-201ENST00000370654 OR10G8Q8NGN5 311 aa8.56□□□□□ -1.04
RPF1-201ENST00000370654 CIRBP-AS1Q8TBR5 109 aa8.56□□□□□ -1.04
RPF1-201ENST00000370654 RPL36ALQ969Q0 106 aaKnown RBP8.56□□□□□ -1.04
RPF1-201ENST00000370654 COX11Q9Y6N1 276 aa8.56□□□□□ -1.04
RPF1-201ENST00000370654 A0A087WX48 190 aa8.55□□□□□ -1.04
RPF1-201ENST00000370654 TRBV6-8A0A0A6YYG3 113 aa8.55□□□□□ -1.04
RPF1-201ENST00000370654 SSTP61278 116 aa8.55□□□□□ -1.04
RPF1-201ENST00000370654 NTM-AS1Q6ZSK4 140 aa8.55□□□□□ -1.04
RPF1-201ENST00000370654 C15orf54Q8N8G6 183 aa8.55□□□□□ -1.04
RPF1-201ENST00000370654 RMI2Q96E14 147 aa8.55□□□□□ -1.04
RPF1-201ENST00000370654 CHAC1Q9BUX1 264 aa8.55□□□□□ -1.04
RPF1-201ENST00000370654 MLST8Q9BVC4 326 aa8.55□□□□□ -1.04
RPF1-201ENST00000370654 TMEM262E9PQX1 116 aa8.54□□□□□ -1.04
RPF1-201ENST00000370654 RAB4BP61018 213 aa8.54□□□□□ -1.04
RPF1-201ENST00000370654 STOML3Q8TAV4 291 aa8.54□□□□□ -1.04
RPF1-201ENST00000370654 FAM213BQ8TBF2 198 aa8.54□□□□□ -1.04
RPF1-201ENST00000370654 SFT2D1Q8WV19 159 aa8.54□□□□□ -1.04
RPF1-201ENST00000370654 MBD3L1Q8WWY6 194 aa8.54□□□□□ -1.04
RPF1-201ENST00000370654 SNAI2O43623 268 aa8.53□□□□□ -1.04
RPF1-201ENST00000370654 ZNF56Q15929 161 aa8.53□□□□□ -1.04
RPF1-201ENST00000370654 LCE2AQ5TA79 106 aaPredicted RBP8.53□□□□□ -1.04
RPF1-201ENST00000370654 KCNRGQ8N5I3 272 aa8.53□□□□□ -1.04
RPF1-201ENST00000370654 DEFB104AQ8WTQ1 72 aa8.53□□□□□ -1.04
RPF1-201ENST00000370654 TCEAL7Q9BRU2 100 aa8.53□□□□□ -1.04
RPF1-201ENST00000370654 CHCHD7Q9BUK0 85 aa8.53□□□□□ -1.04
RPF1-201ENST00000370654 SSBP4Q9BWG4 385 aaPredicted RBP8.53□□□□□ -1.04
RPF1-201ENST00000370654 KIF25-AS1Q9Y6Z4 181 aa8.53□□□□□ -1.04
RPF1-201ENST00000370654 HMCN2Q8NDA2 5059 aa8.53□□□□□ -1.04
RPF1-201ENST00000370654 CCL20P78556 96 aa8.52□□□□□ -1.05
RPF1-201ENST00000370654 KRTAP26-1Q6PEX3 210 aa8.52□□□□□ -1.05
RPF1-201ENST00000370654 BAGE2Q86Y30 109 aa8.52□□□□□ -1.05
RPF1-201ENST00000370654 PKHD1L1Q86WI1 4243 aa8.52□□□□□ -1.05
RPF1-201ENST00000370654 USP17L23D6RBM5 183 aa8.51□□□□□ -1.05
RPF1-201ENST00000370654 ANGP03950 147 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms