RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 RPP21Q9H633 154 aaKnown RBP3.82□□□□□ -1.8
UBE3D-202ENST00000369746 LRBAP50851 2863 aa3.82□□□□□ -1.8
UBE3D-202ENST00000369746 SETD2Q9BYW2 2564 aaPredicted RBP3.82□□□□□ -1.8
UBE3D-202ENST00000369746 A0A0G2JRQ6 117 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 TRBV6-1A0A0K0K1D8 114 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 ATP5EP56381 51 aaPredicted RBP3.81□□□□□ -1.8
UBE3D-202ENST00000369746 DAD1P61803 113 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 NPC2P61916 151 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 SNRPD3P62318 126 aaKnown RBP3.81□□□□□ -1.8
UBE3D-202ENST00000369746 FXYD3Q14802 87 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 ATXN8Q156A1 80 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 CLEC19AQ6UXS0 136 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 C22orf34Q6ZV56 151 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 C6orf223Q8N319 242 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 NEXN-AS1Q8NBZ9 246 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 DPH3P1Q9H4G8 78 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 MAP6D1Q9H9H5 199 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 FREM2Q5SZK8 3169 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 ASPMQ8IZT6 3477 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 IGKV1-9A0A0C4DH69 117 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 M0R381 172 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 SPINK4O60575 86 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 IGHV4-39P01824 125 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 IAPPP10997 89 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 PLNP26678 52 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 ERVK-16P61578 105 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 RIGQ13278 110 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 SCGB1D4Q6XE38 83 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 Q6ZR03 302 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 C11orf72Q8NBR9 251 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 PRSS3P2Q8NHM4 247 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 DYNLRB1Q9NP97 96 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 ATMQ13315 3056 aa3.81□□□□□ -1.8
UBE3D-202ENST00000369746 POLQO75417 2590 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 TRAV8-3A0A0A6YYJ7 113 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 A0A1W2PPR1 153 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 A8MUN3 132 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 IGKV1-5P01602 117 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 SPINK14Q6IE38 97 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 Q6ZPA2 131 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 Q6ZRM9 215 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 FAM168AQ92567 244 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 SPRR3Q9UBC9 169 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 LINC00527Q9UJ94 153 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 HEATR5BQ9P2D3 2071 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 DOCK7Q96N67 2140 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 BIRC6Q9NR09 4857 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 TRBV19A0A075B6N1 114 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 LINC00473A8K010 186 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 H3BSH0 61 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 ERCC8Q13216 396 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 RBMY1FQ15415 496 aaKnown RBP3.8□□□□□ -1.8
UBE3D-202ENST00000369746 MORN5Q5VZ52 161 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 MKXQ8IYA7 352 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 OR8A1Q8NGG7 326 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 SRXN1Q9BYN0 137 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 NXT2Q9NPJ8 142 aaKnown RBP3.8□□□□□ -1.8
UBE3D-202ENST00000369746 ARID1AO14497 2285 aa3.8□□□□□ -1.8
UBE3D-202ENST00000369746 PGPA6NDG6 321 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 LINC01549A6NIU2 74 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 FSTL3O95633 263 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 IGKV1-39P01597 117 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 IGKV1D-39P04432 117 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 ZNF497Q6ZNH5 498 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 FOXL2NBQ6ZUU3 175 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 NTN5Q8WTR8 489 aaPredicted RBP3.79□□□□□ -1.8
UBE3D-202ENST00000369746 PGLYRP4Q96LB8 373 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 FAM218AQ96MZ4 157 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 MTORP42345 2549 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 MGAQ8IWI9 3026 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 EML6Q6ZMW3 1958 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 IGKV2D-26A0A0A0MRZ7 120 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 TRAV12-1A0A0B4J245 112 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 LOC107984156A0A0G2JMH3 177 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 TRBV7-6A0A0J9YX20 115 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 B4DSR2 109 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 INS-IGF2F8WCM5 200 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 PEX7O00628 323 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 ZNF56Q15929 161 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 Q6ZSV7 163 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 ARL17AQ8IVW1 177 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 TIMM17AQ99595 171 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 ZNF355PQ9NSJ1 428 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 CALYQ9NYX4 217 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 A0A0B4J2C4 111 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 hADV29S1A0JD25 119 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 H0YGG7 62 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 M0R378 163 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 ZNF73O43830 326 aaPredicted RBP3.79□□□□□ -1.8
UBE3D-202ENST00000369746 LHBP01229 141 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 RPS27P42677 84 aaKnown RBP3.79□□□□□ -1.8
UBE3D-202ENST00000369746 BRWD1-AS2P59051 145 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 ZNRF1Q8ND25 227 aa3.79□□□□□ -1.8
UBE3D-202ENST00000369746 ZNF706Q9Y5V0 76 aaPredicted RBP3.79□□□□□ -1.8
UBE3D-202ENST00000369746 ANK3Q12955 4377 aaKnown RBP3.78□□□□□ -1.8
UBE3D-202ENST00000369746 ITPR3Q14573 2671 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 LST1O00453 97 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 FCER1GP30273 86 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 MIC13Q5XKP0 118 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms