RNA–Protein interactions for RNA: ENST00000369643.5

FAM3A-204, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-204ENST00000369643 FAM3BP58499 235 aaPredicted RBP12.9□□□□□ -0.34
FAM3A-204ENST00000369643 LINC00315P59091 139 aa12.9□□□□□ -0.34
FAM3A-204ENST00000369643 SPANXN1Q5VSR9 72 aa12.9□□□□□ -0.34
FAM3A-204ENST00000369643 VSIG2Q96IQ7 327 aa12.9□□□□□ -0.34
FAM3A-204ENST00000369643 KMT2CQ8NEZ4 4911 aaKnown RBP12.9□□□□□ -0.34
FAM3A-204ENST00000369643 IGHV4-4A0A075B6R2 117 aa12.89□□□□□ -0.35
FAM3A-204ENST00000369643 TRAV10A0A0B4J240 114 aa12.89□□□□□ -0.35
FAM3A-204ENST00000369643 A0A0J9YY99 117 aa12.89□□□□□ -0.35
FAM3A-204ENST00000369643 LOC100131303A0A0U1RQF7 123 aa12.89□□□□□ -0.35
FAM3A-204ENST00000369643 XKRY2A2RUG3 117 aa12.89□□□□□ -0.35
FAM3A-204ENST00000369643 OR4C5Q8NGB2 326 aa12.89□□□□□ -0.35
FAM3A-204ENST00000369643 GFRA4Q9GZZ7 299 aa12.89□□□□□ -0.35
FAM3A-204ENST00000369643 A0A1W2PPQ1 181 aa12.88□□□□□ -0.35
FAM3A-204ENST00000369643 FAM74A4Q5TZK3 123 aa12.88□□□□□ -0.35
FAM3A-204ENST00000369643 CEMP1Q6PRD7 247 aaPredicted RBP12.88□□□□□ -0.35
FAM3A-204ENST00000369643 C14orf178Q8N769 122 aaPredicted RBP12.88□□□□□ -0.35
FAM3A-204ENST00000369643 A0A087WWC5 75 aa12.88□□□□□ -0.35
FAM3A-204ENST00000369643 EVI2AP22794 236 aa12.88□□□□□ -0.35
FAM3A-204ENST00000369643 TRAV26-1A0A087WT03 109 aa12.87□□□□□ -0.35
FAM3A-204ENST00000369643 MT-ND4LP03901 98 aa12.87□□□□□ -0.35
FAM3A-204ENST00000369643 P0DMU3 169 aa12.87□□□□□ -0.35
FAM3A-204ENST00000369643 FAM231AP0DMU4 169 aa12.87□□□□□ -0.35
FAM3A-204ENST00000369643 FAM231CP0DMU5 169 aa12.87□□□□□ -0.35
FAM3A-204ENST00000369643 CASC10Q5T4H9 136 aa12.87□□□□□ -0.35
FAM3A-204ENST00000369643 SYT8Q8NBV8 401 aa12.87□□□□□ -0.35
FAM3A-204ENST00000369643 ANAPC16Q96DE5 110 aa12.87□□□□□ -0.35
FAM3A-204ENST00000369643 F2Z2F3 143 aa12.86□□□□□ -0.35
FAM3A-204ENST00000369643 NAT8BQ9UHF3 227 aa12.86□□□□□ -0.35
FAM3A-204ENST00000369643 DNAH6Q9C0G6 4158 aa12.85□□□□□ -0.35
FAM3A-204ENST00000369643 FAM231BA6NCW3 169 aa12.85□□□□□ -0.35
FAM3A-204ENST00000369643 COLCA2A8K830 154 aa12.85□□□□□ -0.35
FAM3A-204ENST00000369643 IGLL5B9A064 214 aa12.85□□□□□ -0.35
FAM3A-204ENST00000369643 GATA1P15976 413 aaPredicted RBP12.85□□□□□ -0.35
FAM3A-204ENST00000369643 CACNG7P62955 275 aa12.85□□□□□ -0.35
FAM3A-204ENST00000369643 TWIST1Q15672 202 aa12.85□□□□□ -0.35
FAM3A-204ENST00000369643 PIK3CD-AS1Q5SR53 167 aa12.85□□□□□ -0.35
FAM3A-204ENST00000369643 MRPL54Q6P161 138 aaKnown RBP12.85□□□□□ -0.35
FAM3A-204ENST00000369643 KMT2AQ03164 3969 aa12.85□□□□□ -0.35
FAM3A-204ENST00000369643 A8MWV9 139 aa12.84□□□□□ -0.35
FAM3A-204ENST00000369643 PPP1R2P9O14990 202 aa12.84□□□□□ -0.35
FAM3A-204ENST00000369643 GAS8-AS1O95177 125 aa12.84□□□□□ -0.35
FAM3A-204ENST00000369643 CRYBA4P53673 196 aa12.84□□□□□ -0.35
FAM3A-204ENST00000369643 SLC25A29Q8N8R3 303 aa12.84□□□□□ -0.35
FAM3A-204ENST00000369643 RYR2Q92736 4967 aa12.83□□□□□ -0.35
FAM3A-204ENST00000369643 A0A1B0GXF2 115 aa12.83□□□□□ -0.35
FAM3A-204ENST00000369643 WDR73Q6P4I2 378 aa12.83□□□□□ -0.35
FAM3A-204ENST00000369643 NDUFAF3Q9BU61 184 aa12.83□□□□□ -0.35
FAM3A-204ENST00000369643 APLNQ9ULZ1 77 aa12.83□□□□□ -0.35
FAM3A-204ENST00000369643 TRGV4A0A0C4DH28 118 aa12.83□□□□□ -0.36
FAM3A-204ENST00000369643 A0A1B0GUT8 65 aa12.83□□□□□ -0.36
FAM3A-204ENST00000369643 TRAV26-2A0A0B4J265 109 aa12.82□□□□□ -0.36
FAM3A-204ENST00000369643 AP1S3Q96PC3 154 aa12.82□□□□□ -0.36
FAM3A-204ENST00000369643 HHLA3Q9XRX5 114 aa12.82□□□□□ -0.36
FAM3A-204ENST00000369643 URGCP-MRPS24S4R325 110 aa12.82□□□□□ -0.36
FAM3A-204ENST00000369643 NUPR2A6NF83 97 aa12.81□□□□□ -0.36
FAM3A-204ENST00000369643 MGPP08493 103 aa12.81□□□□□ -0.36
FAM3A-204ENST00000369643 ZFP2Q6ZN57 461 aa12.81□□□□□ -0.36
FAM3A-204ENST00000369643 RNF185Q96GF1 192 aa12.81□□□□□ -0.36
FAM3A-204ENST00000369643 A0A096LPF7 62 aa12.8□□□□□ -0.36
FAM3A-204ENST00000369643 CAMPP49913 170 aa12.8□□□□□ -0.36
FAM3A-204ENST00000369643 RAB5BP61020 215 aa12.8□□□□□ -0.36
FAM3A-204ENST00000369643 SUMO4Q6EEV6 95 aa12.8□□□□□ -0.36
FAM3A-204ENST00000369643 CTDSP1Q9GZU7 261 aa12.8□□□□□ -0.36
FAM3A-204ENST00000369643 TMEM242Q9NWH2 141 aa12.8□□□□□ -0.36
FAM3A-204ENST00000369643 C1orf196B1AJZ1 125 aa12.79□□□□□ -0.36
FAM3A-204ENST00000369643 ZNF56Q15929 161 aa12.79□□□□□ -0.36
FAM3A-204ENST00000369643 PRO0255Q9UI72 69 aa12.79□□□□□ -0.36
FAM3A-204ENST00000369643 C3orf84H3BNL1 204 aa12.78□□□□□ -0.36
FAM3A-204ENST00000369643 PAX4O43316 350 aa12.78□□□□□ -0.36
FAM3A-204ENST00000369643 AMN1Q8IY45 258 aa12.78□□□□□ -0.36
FAM3A-204ENST00000369643 YPEL4Q96NS1 127 aa12.78□□□□□ -0.36
FAM3A-204ENST00000369643 DPH3P1Q9H4G8 78 aa12.78□□□□□ -0.36
FAM3A-204ENST00000369643 K7EQD1 137 aa12.78□□□□□ -0.36
FAM3A-204ENST00000369643 NUDT3O95989 172 aa12.78□□□□□ -0.36
FAM3A-204ENST00000369643 LINC00694P0DN24 101 aa12.78□□□□□ -0.36
FAM3A-204ENST00000369643 GYPEP15421 78 aa12.78□□□□□ -0.36
FAM3A-204ENST00000369643 SMKR1H3BMG3 65 aa12.77□□□□□ -0.37
FAM3A-204ENST00000369643 TRGC1P0CF51 173 aa12.77□□□□□ -0.37
FAM3A-204ENST00000369643 RAB5AP20339 215 aa12.77□□□□□ -0.37
FAM3A-204ENST00000369643 RYR3Q15413 4870 aa12.76□□□□□ -0.37
FAM3A-204ENST00000369643 TGIF2-C20orf24A0A0A6YYL0 155 aa12.76□□□□□ -0.37
FAM3A-204ENST00000369643 RHODO00212 210 aa12.76□□□□□ -0.37
FAM3A-204ENST00000369643 RIGQ13278 110 aa12.76□□□□□ -0.37
FAM3A-204ENST00000369643 GATD1Q8NB37 220 aa12.76□□□□□ -0.37
FAM3A-204ENST00000369643 TMEM191AQ9H0A3 160 aa12.76□□□□□ -0.37
FAM3A-204ENST00000369643 TRBV6-4A0A1B0GX49 114 aa12.75□□□□□ -0.37
FAM3A-204ENST00000369643 GAGE12JA6NER3 117 aa12.75□□□□□ -0.37
FAM3A-204ENST00000369643 F5H697 171 aa12.75□□□□□ -0.37
FAM3A-204ENST00000369643 M0QY20 66 aa12.75□□□□□ -0.37
FAM3A-204ENST00000369643 RAB4AP20338 218 aa12.75□□□□□ -0.37
FAM3A-204ENST00000369643 GAGE1Q13065 139 aa12.75□□□□□ -0.37
FAM3A-204ENST00000369643 GAGE4Q13068 117 aa12.75□□□□□ -0.37
FAM3A-204ENST00000369643 GAGE5Q13069 117 aa12.75□□□□□ -0.37
FAM3A-204ENST00000369643 GAGE13Q4V321 117 aa12.75□□□□□ -0.37
FAM3A-204ENST00000369643 NEXN-AS1Q8NBZ9 246 aa12.75□□□□□ -0.37
FAM3A-204ENST00000369643 BORCS7Q96B45 105 aa12.75□□□□□ -0.37
FAM3A-204ENST00000369643 RPL39LQ96EH5 51 aaKnown RBP12.75□□□□□ -0.37
FAM3A-204ENST00000369643 IMMP2LQ96T52 175 aa12.75□□□□□ -0.37
FAM3A-204ENST00000369643 NCR2O95944 276 aa12.74□□□□□ -0.37
FAM3A-204ENST00000369643 RPS10P46783 165 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms