RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 FAM110DQ8TAY7 271 aaPredicted RBP12.16□□□□□ -0.46
CHD1L-203ENST00000369259 ITLN2Q8WWU7 325 aaPredicted RBP12.16□□□□□ -0.46
CHD1L-203ENST00000369259 KIF25-AS1Q9Y6Z4 181 aa12.16□□□□□ -0.46
CHD1L-203ENST00000369259 A0A0G2JNJ9 132 aa12.16□□□□□ -0.46
CHD1L-203ENST00000369259 A0A0J9YX75 114 aa12.16□□□□□ -0.46
CHD1L-203ENST00000369259 GNRH2O43555 120 aa12.16□□□□□ -0.46
CHD1L-203ENST00000369259 DEFB121Q5J5C9 76 aa12.16□□□□□ -0.46
CHD1L-203ENST00000369259 C3orf56Q8N813 242 aa12.16□□□□□ -0.46
CHD1L-203ENST00000369259 C20orf173Q96LM9 149 aa12.16□□□□□ -0.46
CHD1L-203ENST00000369259 Q9UFV3 132 aa12.16□□□□□ -0.46
CHD1L-203ENST00000369259 RNASE3P12724 160 aaKnown RBP12.15□□□□□ -0.46
CHD1L-203ENST00000369259 CCDC140Q96MF4 163 aa12.15□□□□□ -0.46
CHD1L-203ENST00000369259 DUX3Q96PT4 197 aa12.15□□□□□ -0.46
CHD1L-203ENST00000369259 U3KQE9 123 aa12.15□□□□□ -0.46
CHD1L-203ENST00000369259 SDHAF1A6NFY7 115 aa12.15□□□□□ -0.46
CHD1L-203ENST00000369259 C9orf139Q6ZV77 190 aa12.15□□□□□ -0.46
CHD1L-203ENST00000369259 ICOSQ9Y6W8 199 aa12.15□□□□□ -0.46
CHD1L-203ENST00000369259 DMXL2Q8TDJ6 3036 aa12.14□□□□□ -0.47
CHD1L-203ENST00000369259 IGHV3-64A0A075B6Q5 118 aa12.14□□□□□ -0.47
CHD1L-203ENST00000369259 NXPH4O95158 308 aa12.14□□□□□ -0.47
CHD1L-203ENST00000369259 SUMO4Q6EEV6 95 aa12.14□□□□□ -0.47
CHD1L-203ENST00000369259 A0A0J9YXY3 114 aa12.13□□□□□ -0.47
CHD1L-203ENST00000369259 B9A039 149 aa12.13□□□□□ -0.47
CHD1L-203ENST00000369259 COX6CP09669 75 aa12.13□□□□□ -0.47
CHD1L-203ENST00000369259 RNASE4P34096 147 aaKnown RBP12.13□□□□□ -0.47
CHD1L-203ENST00000369259 EBI3Q14213 229 aa12.13□□□□□ -0.47
CHD1L-203ENST00000369259 ECSCRQ19T08 205 aa12.13□□□□□ -0.47
CHD1L-203ENST00000369259 TMEM101Q96IK0 257 aa12.13□□□□□ -0.47
CHD1L-203ENST00000369259 IGHV1-69P01742 117 aa12.13□□□□□ -0.47
CHD1L-203ENST00000369259 ZNF22P17026 224 aaPredicted RBP12.13□□□□□ -0.47
CHD1L-203ENST00000369259 UBE2E1P51965 193 aa12.13□□□□□ -0.47
CHD1L-203ENST00000369259 KLK9Q2XQG4 91 aa12.13□□□□□ -0.47
CHD1L-203ENST00000369259 KLK9Q9UKQ9 250 aa12.13□□□□□ -0.47
CHD1L-203ENST00000369259 TRBV27A0A0K0K1C4 114 aa12.12□□□□□ -0.47
CHD1L-203ENST00000369259 LY6DQ14210 128 aa12.12□□□□□ -0.47
CHD1L-203ENST00000369259 OVOL1O14753 267 aa12.12□□□□□ -0.47
CHD1L-203ENST00000369259 Q8N9W7 124 aa12.12□□□□□ -0.47
CHD1L-203ENST00000369259 OPRPNQ99935 248 aaPredicted RBP12.12□□□□□ -0.47
CHD1L-203ENST00000369259 POLEQ07864 2286 aa12.11□□□□□ -0.47
CHD1L-203ENST00000369259 IGFL3Q6UXB1 125 aa12.11□□□□□ -0.47
CHD1L-203ENST00000369259 EEF1AKMT3Q96AZ1 226 aa12.11□□□□□ -0.47
CHD1L-203ENST00000369259 MUC3AQ02505 3323 aa12.11□□□□□ -0.47
CHD1L-203ENST00000369259 M0R1W7 72 aa12.11□□□□□ -0.47
CHD1L-203ENST00000369259 ID1P41134 155 aa12.11□□□□□ -0.47
CHD1L-203ENST00000369259 PLA2G2CQ5R387 149 aa12.11□□□□□ -0.47
CHD1L-203ENST00000369259 VMO1Q7Z5L0 202 aa12.11□□□□□ -0.47
CHD1L-203ENST00000369259 IMUPQ9GZP8 106 aa12.11□□□□□ -0.47
CHD1L-203ENST00000369259 FAM236AA0A1B0GUQ0 79 aa12.1□□□□□ -0.47
CHD1L-203ENST00000369259 FAM236BA0A1B0GV22 79 aa12.1□□□□□ -0.47
CHD1L-203ENST00000369259 F5H697 171 aa12.1□□□□□ -0.47
CHD1L-203ENST00000369259 NRGNQ92686 78 aa12.1□□□□□ -0.47
CHD1L-203ENST00000369259 LITAFQ99732 161 aa12.1□□□□□ -0.47
CHD1L-203ENST00000369259 JPT2Q9H910 190 aa12.1□□□□□ -0.47
CHD1L-203ENST00000369259 NCOR1O75376 2440 aa12.1□□□□□ -0.47
CHD1L-203ENST00000369259 TRGV11A0A075B6L2 103 aa12.1□□□□□ -0.47
CHD1L-203ENST00000369259 CLEC2BQ92478 149 aa12.1□□□□□ -0.47
CHD1L-203ENST00000369259 DNAJC30Q96LL9 226 aa12.1□□□□□ -0.47
CHD1L-203ENST00000369259 FAM19A4Q96LR4 140 aa12.1□□□□□ -0.47
CHD1L-203ENST00000369259 OOSP1A8MZH6 123 aa12.09□□□□□ -0.47
CHD1L-203ENST00000369259 LST1O00453 97 aa12.09□□□□□ -0.47
CHD1L-203ENST00000369259 PRSS2P07478 247 aa12.09□□□□□ -0.47
CHD1L-203ENST00000369259 CD3EP07766 207 aa12.09□□□□□ -0.47
CHD1L-203ENST00000369259 A0A087WWL8 130 aa12.08□□□□□ -0.47
CHD1L-203ENST00000369259 TRBV7-1A0A0A6YYK4 115 aa12.08□□□□□ -0.47
CHD1L-203ENST00000369259 TRBV6-5A0A0K0K1A5 114 aa12.08□□□□□ -0.47
CHD1L-203ENST00000369259 ATP6V0E1O15342 81 aa12.08□□□□□ -0.47
CHD1L-203ENST00000369259 DEFB1P60022 68 aa12.08□□□□□ -0.47
CHD1L-203ENST00000369259 APRG1Q8IVJ8 170 aa12.08□□□□□ -0.47
CHD1L-203ENST00000369259 ZNF580Q9UK33 172 aa12.08□□□□□ -0.47
CHD1L-203ENST00000369259 ZNF256Q9Y2P7 627 aaPredicted RBP12.08□□□□□ -0.47
CHD1L-203ENST00000369259 LINC00694P0DN24 101 aa12.08□□□□□ -0.48
CHD1L-203ENST00000369259 A0A0J9YXV3 536 aa12.07□□□□□ -0.48
CHD1L-203ENST00000369259 NSUN5P1Q3KNT7 163 aa12.07□□□□□ -0.48
CHD1L-203ENST00000369259 SPANXDQ9BXN6 97 aa12.07□□□□□ -0.48
CHD1L-203ENST00000369259 RHOHQ15669 191 aa12.07□□□□□ -0.48
CHD1L-203ENST00000369259 C3orf22Q8N5N4 141 aa12.07□□□□□ -0.48
CHD1L-203ENST00000369259 CEP250Q9BV73 2442 aa12.06□□□□□ -0.48
CHD1L-203ENST00000369259 TACC2O95359 2948 aa12.06□□□□□ -0.48
CHD1L-203ENST00000369259 ADARB2-AS1A8MUL3 147 aa12.06□□□□□ -0.48
CHD1L-203ENST00000369259 ACYP1P07311 99 aa12.06□□□□□ -0.48
CHD1L-203ENST00000369259 IGHV3-30-3P0DP02 117 aa12.06□□□□□ -0.48
CHD1L-203ENST00000369259 C9orf153Q5TBE3 101 aa12.06□□□□□ -0.48
CHD1L-203ENST00000369259 CSMD1Q96PZ7 3565 aa12.06□□□□□ -0.48
CHD1L-203ENST00000369259 NDUFA7O95182 113 aa12.06□□□□□ -0.48
CHD1L-203ENST00000369259 SPANXCQ9NY87 97 aa12.06□□□□□ -0.48
CHD1L-203ENST00000369259 MUC4Q99102 2169 aa12.06□□□□□ -0.48
CHD1L-203ENST00000369259 ARHGAP32A7KAX9 2087 aa12.05□□□□□ -0.48
CHD1L-203ENST00000369259 G3V318 75 aa12.05□□□□□ -0.48
CHD1L-203ENST00000369259 SOCS3O14543 225 aa12.05□□□□□ -0.48
CHD1L-203ENST00000369259 CSDC2Q9Y534 153 aaKnown RBP12.05□□□□□ -0.48
CHD1L-203ENST00000369259 BOD1L1Q8NFC6 3051 aa12.05□□□□□ -0.48
CHD1L-203ENST00000369259 I3L3M4 83 aa12.05□□□□□ -0.48
CHD1L-203ENST00000369259 ADAMTSL4-AS1Q5T5F5 129 aa12.05□□□□□ -0.48
CHD1L-203ENST00000369259 MINOS1Q5TGZ0 78 aa12.05□□□□□ -0.48
CHD1L-203ENST00000369259 CEMP1Q6PRD7 247 aaPredicted RBP12.05□□□□□ -0.48
CHD1L-203ENST00000369259 MINOS1-NBL1R4GNA1 71 aa12.05□□□□□ -0.48
CHD1L-203ENST00000369259 Q6ZSV7 163 aa12.04□□□□□ -0.48
CHD1L-203ENST00000369259 SPXQ9BT56 116 aa12.04□□□□□ -0.48
CHD1L-203ENST00000369259 TIMM21Q9BVV7 248 aa12.04□□□□□ -0.48
CHD1L-203ENST00000369259 F6UB75 175 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms