RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 LINC00310P59036 64 aa17.2■□□□□ 0.34
SNX3-203ENST00000368979 PRELID3AQ96N28 172 aa17.2■□□□□ 0.34
SNX3-203ENST00000368979 X6R8D5 127 aa17.2■□□□□ 0.34
SNX3-203ENST00000368979 CRYGDP07320 174 aa17.19■□□□□ 0.34
SNX3-203ENST00000368979 SMIM17P0DL12 118 aa17.19■□□□□ 0.34
SNX3-203ENST00000368979 BAGE3Q86Y29 109 aa17.19■□□□□ 0.34
SNX3-203ENST00000368979 MRAP2Q96G30 205 aa17.19■□□□□ 0.34
SNX3-203ENST00000368979 NDUFAF3Q9BU61 184 aa17.19■□□□□ 0.34
SNX3-203ENST00000368979 SAMD10Q9BYL1 202 aa17.19■□□□□ 0.34
SNX3-203ENST00000368979 A0A087WWL8 130 aa17.18■□□□□ 0.34
SNX3-203ENST00000368979 GAS8-AS1O95177 125 aa17.18■□□□□ 0.34
SNX3-203ENST00000368979 MGPP08493 103 aa17.18■□□□□ 0.34
SNX3-203ENST00000368979 DAZ2Q13117 558 aaKnown RBP17.18■□□□□ 0.34
SNX3-203ENST00000368979 DEFB135Q30KP9 77 aa17.18■□□□□ 0.34
SNX3-203ENST00000368979 RASL10AQ92737 203 aa17.18■□□□□ 0.34
SNX3-203ENST00000368979 MRPL16Q9NX20 251 aaKnown RBP17.18■□□□□ 0.34
SNX3-203ENST00000368979 SMIM9A6NGZ8 99 aa17.17■□□□□ 0.34
SNX3-203ENST00000368979 HIST3H2BBQ8N257 126 aa17.17■□□□□ 0.34
SNX3-203ENST00000368979 LAMTOR2Q9Y2Q5 125 aa17.17■□□□□ 0.34
SNX3-203ENST00000368979 PKD1L1Q8TDX9 2849 aa17.17■□□□□ 0.34
SNX3-203ENST00000368979 TRAV26-2A0A0B4J265 109 aa17.16■□□□□ 0.34
SNX3-203ENST00000368979 A8MWV9 139 aa17.16■□□□□ 0.34
SNX3-203ENST00000368979 SERF1AO75920 110 aa17.16■□□□□ 0.34
SNX3-203ENST00000368979 NPYP01303 97 aa17.16■□□□□ 0.34
SNX3-203ENST00000368979 NUPR1O60356 82 aa17.16■□□□□ 0.34
SNX3-203ENST00000368979 GATA1P15976 413 aaPredicted RBP17.16■□□□□ 0.34
SNX3-203ENST00000368979 KPRPQ5T749 579 aaPredicted RBP17.16■□□□□ 0.34
SNX3-203ENST00000368979 ESDP10768 282 aa17.15■□□□□ 0.34
SNX3-203ENST00000368979 LGALS9BQ3B8N2 356 aa17.15■□□□□ 0.34
SNX3-203ENST00000368979 FAM74A4Q5TZK3 123 aa17.15■□□□□ 0.34
SNX3-203ENST00000368979 Q6ZWC4 215 aa17.15■□□□□ 0.34
SNX3-203ENST00000368979 OVOL2Q9BRP0 275 aa17.15■□□□□ 0.34
SNX3-203ENST00000368979 NRACQ8N912 160 aa17.14■□□□□ 0.33
SNX3-203ENST00000368979 URB1-AS1Q96HZ7 61 aa17.14■□□□□ 0.33
SNX3-203ENST00000368979 NOP10Q9NPE3 64 aaKnown RBP17.14■□□□□ 0.33
SNX3-203ENST00000368979 TRGV1A0A0A0MS02 117 aa17.13■□□□□ 0.33
SNX3-203ENST00000368979 TNFRSF6BO95407 300 aa17.13■□□□□ 0.33
SNX3-203ENST00000368979 PDZD11Q5EBL8 140 aa17.13■□□□□ 0.33
SNX3-203ENST00000368979 UFSP1Q6NVU6 142 aa17.13■□□□□ 0.33
SNX3-203ENST00000368979 RNF183Q96D59 192 aa17.13■□□□□ 0.33
SNX3-203ENST00000368979 IFITM10A6NMD0 228 aa17.12■□□□□ 0.33
SNX3-203ENST00000368979 RS1O15537 224 aa17.12■□□□□ 0.33
SNX3-203ENST00000368979 CFAP126Q5VTH2 177 aa17.12■□□□□ 0.33
SNX3-203ENST00000368979 SUMO4Q6EEV6 95 aa17.12■□□□□ 0.33
SNX3-203ENST00000368979 Q6ZTI0 123 aa17.12■□□□□ 0.33
SNX3-203ENST00000368979 ZNF56Q15929 161 aa17.11■□□□□ 0.33
SNX3-203ENST00000368979 NIT1Q86X76 327 aa17.11■□□□□ 0.33
SNX3-203ENST00000368979 OR11H2Q8NH07 326 aa17.11■□□□□ 0.33
SNX3-203ENST00000368979 DNAH3Q8TD57 4116 aa17.1■□□□□ 0.33
SNX3-203ENST00000368979 F5H697 171 aa17.09■□□□□ 0.33
SNX3-203ENST00000368979 RHODO00212 210 aa17.09■□□□□ 0.33
SNX3-203ENST00000368979 MAP1LC3AQ9H492 121 aa17.09■□□□□ 0.33
SNX3-203ENST00000368979 PRSS47A8MTI9 375 aa17.08■□□□□ 0.32
SNX3-203ENST00000368979 RNASEKQ6P5S7 137 aaKnown RBP17.08■□□□□ 0.32
SNX3-203ENST00000368979 CHCHD1Q96BP2 118 aaKnown RBP17.08■□□□□ 0.32
SNX3-203ENST00000368979 EDA2RQ9HAV5 297 aa17.08■□□□□ 0.32
SNX3-203ENST00000368979 LOC389332A0A1B0GUA5 103 aa17.07■□□□□ 0.32
SNX3-203ENST00000368979 LINC00614P0C842 121 aa17.07■□□□□ 0.32
SNX3-203ENST00000368979 S100A2P29034 98 aa17.07■□□□□ 0.32
SNX3-203ENST00000368979 IFI27P40305 119 aaPredicted RBP17.07■□□□□ 0.32
SNX3-203ENST00000368979 ZFP2Q6ZN57 461 aa17.07■□□□□ 0.32
SNX3-203ENST00000368979 RPL39LQ96EH5 51 aaKnown RBP17.07■□□□□ 0.32
SNX3-203ENST00000368979 M0QY20 66 aa17.06■□□□□ 0.32
SNX3-203ENST00000368979 PPP1R17O96001 155 aa17.06■□□□□ 0.32
SNX3-203ENST00000368979 MIFP14174 115 aa17.06■□□□□ 0.32
SNX3-203ENST00000368979 PRSS3P2Q8NHM4 247 aa17.06■□□□□ 0.32
SNX3-203ENST00000368979 HIST1H2BLQ99880 126 aa17.06■□□□□ 0.32
SNX3-203ENST00000368979 TP53TG1Q9Y2A0 90 aa17.06■□□□□ 0.32
SNX3-203ENST00000368979 IGHV3-73A0A0B4J1V6 119 aa17.06■□□□□ 0.32
SNX3-203ENST00000368979 TRAV4A0A0B4J268 109 aa17.06■□□□□ 0.32
SNX3-203ENST00000368979 NACAE9PAV3 2078 aa17.06■□□□□ 0.32
SNX3-203ENST00000368979 EMP1P54849 157 aa17.06■□□□□ 0.32
SNX3-203ENST00000368979 LINC00612Q8N6U2 182 aa17.06■□□□□ 0.32
SNX3-203ENST00000368979 Q8NAQ8 132 aa17.06■□□□□ 0.32
SNX3-203ENST00000368979 IGHV4-28A0A0C4DH34 117 aa17.05■□□□□ 0.32
SNX3-203ENST00000368979 K7EIL1 84 aa17.05■□□□□ 0.32
SNX3-203ENST00000368979 PRB2P02812 416 aaPredicted RBP17.05■□□□□ 0.32
SNX3-203ENST00000368979 OR4C5Q8NGB2 326 aa17.05■□□□□ 0.32
SNX3-203ENST00000368979 C20orf78Q9BR46 151 aa17.05■□□□□ 0.32
SNX3-203ENST00000368979 GAGE12BA1L429 117 aa17.04■□□□□ 0.32
SNX3-203ENST00000368979 HSBP1O75506 76 aa17.04■□□□□ 0.32
SNX3-203ENST00000368979 GAGE7O76087 117 aa17.04■□□□□ 0.32
SNX3-203ENST00000368979 GAGE12FP0CL80 117 aa17.04■□□□□ 0.32
SNX3-203ENST00000368979 GAGE12GP0CL81 117 aa17.04■□□□□ 0.32
SNX3-203ENST00000368979 GAGE12IP0CL82 117 aa17.04■□□□□ 0.32
SNX3-203ENST00000368979 FABP4P15090 132 aa17.04■□□□□ 0.32
SNX3-203ENST00000368979 FA2HQ7L5A8 372 aa17.04■□□□□ 0.32
SNX3-203ENST00000368979 TMEM18Q96B42 140 aa17.04■□□□□ 0.32
SNX3-203ENST00000368979 IGLV2-18A0A075B6J9 118 aa17.03■□□□□ 0.32
SNX3-203ENST00000368979 SUMO2P61956 95 aaKnown RBP17.03■□□□□ 0.32
SNX3-203ENST00000368979 ZNF479Q96JC4 524 aa17.03■□□□□ 0.32
SNX3-203ENST00000368979 NXT2Q9NPJ8 142 aaKnown RBP17.03■□□□□ 0.32
SNX3-203ENST00000368979 LINC01546A6NGU7 62 aa17.02■□□□□ 0.32
SNX3-203ENST00000368979 Q8N8P6 123 aa17.02■□□□□ 0.32
SNX3-203ENST00000368979 AP5S1Q9NUS5 200 aa17.02■□□□□ 0.32
SNX3-203ENST00000368979 TRBV6-5A0A0K0K1A5 114 aa17.01■□□□□ 0.31
SNX3-203ENST00000368979 H7C1H1 209 aa17.01■□□□□ 0.31
SNX3-203ENST00000368979 PMCHP20382 165 aa17.01■□□□□ 0.31
SNX3-203ENST00000368979 Q6ZSN1 163 aa17.01■□□□□ 0.31
SNX3-203ENST00000368979 PACRGQ96M98 296 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms