RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 Q6ZSN1 163 aa9.72□□□□□ -0.85
TPM3-211ENST00000368531 NUP35Q8NFH5 326 aa9.72□□□□□ -0.85
TPM3-211ENST00000368531 FAM210BQ96KR6 192 aa9.72□□□□□ -0.85
TPM3-211ENST00000368531 GFRA4Q9GZZ7 299 aa9.72□□□□□ -0.85
TPM3-211ENST00000368531 LOC100131303A0A0U1RQF7 123 aa9.71□□□□□ -0.86
TPM3-211ENST00000368531 SMIM27A0A1W2PRY6 76 aa9.71□□□□□ -0.86
TPM3-211ENST00000368531 F5H697 171 aa9.71□□□□□ -0.86
TPM3-211ENST00000368531 RHODO00212 210 aa9.71□□□□□ -0.86
TPM3-211ENST00000368531 MGPP08493 103 aa9.71□□□□□ -0.86
TPM3-211ENST00000368531 GATA1P15976 413 aaPredicted RBP9.71□□□□□ -0.86
TPM3-211ENST00000368531 EVI2AP22794 236 aa9.71□□□□□ -0.86
TPM3-211ENST00000368531 FOXA3P55318 350 aaPredicted RBP9.71□□□□□ -0.86
TPM3-211ENST00000368531 SLAQ13239 276 aa9.71□□□□□ -0.86
TPM3-211ENST00000368531 ZNF56Q15929 161 aa9.71□□□□□ -0.86
TPM3-211ENST00000368531 C10orf91Q5T1B1 145 aa9.71□□□□□ -0.86
TPM3-211ENST00000368531 WDR73Q6P4I2 378 aa9.71□□□□□ -0.86
TPM3-211ENST00000368531 ANAPC16Q96DE5 110 aa9.71□□□□□ -0.86
TPM3-211ENST00000368531 AP1S3Q96PC3 154 aa9.71□□□□□ -0.86
TPM3-211ENST00000368531 NAT8BQ9UHF3 227 aa9.71□□□□□ -0.86
TPM3-211ENST00000368531 CARHSP1Q9Y2V2 147 aaKnown RBP9.71□□□□□ -0.86
TPM3-211ENST00000368531 A0A1B0GUT8 65 aa9.7□□□□□ -0.86
TPM3-211ENST00000368531 FAM231BA6NCW3 169 aa9.7□□□□□ -0.86
TPM3-211ENST00000368531 CIDEAO60543 219 aa9.7□□□□□ -0.86
TPM3-211ENST00000368531 TRGC1P0CF51 173 aa9.7□□□□□ -0.86
TPM3-211ENST00000368531 GYPEP15421 78 aa9.7□□□□□ -0.86
TPM3-211ENST00000368531 UFSP1Q6NVU6 142 aa9.7□□□□□ -0.86
TPM3-211ENST00000368531 ZFP2Q6ZN57 461 aa9.7□□□□□ -0.86
TPM3-211ENST00000368531 SLC25A29Q8N8R3 303 aa9.7□□□□□ -0.86
TPM3-211ENST00000368531 C15orf53Q8NAA6 179 aa9.7□□□□□ -0.86
TPM3-211ENST00000368531 A0A096LPF7 62 aa9.69□□□□□ -0.86
TPM3-211ENST00000368531 APOC3P02656 99 aa9.69□□□□□ -0.86
TPM3-211ENST00000368531 TCTAP57738 103 aa9.69□□□□□ -0.86
TPM3-211ENST00000368531 PRADC1Q9BSG0 188 aa9.69□□□□□ -0.86
TPM3-211ENST00000368531 CNFNQ9BYD5 112 aa9.69□□□□□ -0.86
TPM3-211ENST00000368531 P0DMU3 169 aa9.68□□□□□ -0.86
TPM3-211ENST00000368531 FAM231AP0DMU4 169 aa9.68□□□□□ -0.86
TPM3-211ENST00000368531 FAM231CP0DMU5 169 aa9.68□□□□□ -0.86
TPM3-211ENST00000368531 FAM3BP58499 235 aaPredicted RBP9.68□□□□□ -0.86
TPM3-211ENST00000368531 RIGQ13278 110 aa9.68□□□□□ -0.86
TPM3-211ENST00000368531 NDUFA5Q16718 116 aa9.68□□□□□ -0.86
TPM3-211ENST00000368531 SMIM15Q7Z3B0 74 aa9.68□□□□□ -0.86
TPM3-211ENST00000368531 CLRN3Q8NCR9 226 aa9.68□□□□□ -0.86
TPM3-211ENST00000368531 ICOSQ9Y6W8 199 aa9.68□□□□□ -0.86
TPM3-211ENST00000368531 KIF25-AS1Q9Y6Z4 181 aa9.68□□□□□ -0.86
TPM3-211ENST00000368531 TRBV6-4A0A1B0GX49 114 aa9.67□□□□□ -0.86
TPM3-211ENST00000368531 C7orf77A4D0Y5 90 aa9.67□□□□□ -0.86
TPM3-211ENST00000368531 H3BNG1 76 aa9.67□□□□□ -0.86
TPM3-211ENST00000368531 K7EQD1 137 aa9.67□□□□□ -0.86
TPM3-211ENST00000368531 RAB4BP61018 213 aa9.67□□□□□ -0.86
TPM3-211ENST00000368531 RHOHQ15669 191 aa9.67□□□□□ -0.86
TPM3-211ENST00000368531 MRPL54Q6P161 138 aaKnown RBP9.67□□□□□ -0.86
TPM3-211ENST00000368531 DPH3P1Q9H4G8 78 aa9.67□□□□□ -0.86
TPM3-211ENST00000368531 RPS10P5Q9NQ39 176 aa9.67□□□□□ -0.86
TPM3-211ENST00000368531 Q9UF83 564 aa9.67□□□□□ -0.86
TPM3-211ENST00000368531 GAGE12JA6NER3 117 aa9.66□□□□□ -0.86
TPM3-211ENST00000368531 LY6G6CO95867 125 aa9.66□□□□□ -0.86
TPM3-211ENST00000368531 CAMPP49913 170 aa9.66□□□□□ -0.86
TPM3-211ENST00000368531 LINC00315P59091 139 aa9.66□□□□□ -0.86
TPM3-211ENST00000368531 GAGE1Q13065 139 aa9.66□□□□□ -0.86
TPM3-211ENST00000368531 GAGE4Q13068 117 aa9.66□□□□□ -0.86
TPM3-211ENST00000368531 GAGE5Q13069 117 aa9.66□□□□□ -0.86
TPM3-211ENST00000368531 MRPL23Q16540 153 aaKnown RBP9.66□□□□□ -0.86
TPM3-211ENST00000368531 GAGE13Q4V321 117 aa9.66□□□□□ -0.86
TPM3-211ENST00000368531 CTDSP1Q9GZU7 261 aa9.66□□□□□ -0.86
TPM3-211ENST00000368531 SRIP30626 198 aa9.65□□□□□ -0.86
TPM3-211ENST00000368531 UBE2DNLQ8IWF7 75 aa9.65□□□□□ -0.86
TPM3-211ENST00000368531 SNAPINO95295 136 aa9.64□□□□□ -0.87
TPM3-211ENST00000368531 RHEBQ15382 184 aa9.64□□□□□ -0.87
TPM3-211ENST00000368531 SUMO4Q6EEV6 95 aa9.64□□□□□ -0.87
TPM3-211ENST00000368531 NEGR1Q7Z3B1 354 aa9.64□□□□□ -0.87
TPM3-211ENST00000368531 SVBPQ8N300 66 aa9.64□□□□□ -0.87
TPM3-211ENST00000368531 ESRGQ1W209 222 aa9.63□□□□□ -0.87
TPM3-211ENST00000368531 ZNRF2Q8NHG8 242 aa9.63□□□□□ -0.87
TPM3-211ENST00000368531 URGCP-MRPS24S4R325 110 aa9.63□□□□□ -0.87
TPM3-211ENST00000368531 TRAV26-2A0A0B4J265 109 aa9.62□□□□□ -0.87
TPM3-211ENST00000368531 CCL18P55774 89 aa9.62□□□□□ -0.87
TPM3-211ENST00000368531 HBBP68871 147 aa9.62□□□□□ -0.87
TPM3-211ENST00000368531 KCNIP4Q6PIL6 250 aa9.62□□□□□ -0.87
TPM3-211ENST00000368531 AMN1Q8IY45 258 aa9.62□□□□□ -0.87
TPM3-211ENST00000368531 LINC00476Q8WZB0 136 aa9.62□□□□□ -0.87
TPM3-211ENST00000368531 TMEM191AQ9H0A3 160 aa9.62□□□□□ -0.87
TPM3-211ENST00000368531 DNAH7Q8WXX0 4024 aa9.61□□□□□ -0.87
TPM3-211ENST00000368531 A0A087WWC5 75 aa9.61□□□□□ -0.87
TPM3-211ENST00000368531 M0QY20 66 aa9.61□□□□□ -0.87
TPM3-211ENST00000368531 S100PP25815 95 aa9.61□□□□□ -0.87
TPM3-211ENST00000368531 RPL36AP83881 106 aaKnown RBP9.61□□□□□ -0.87
TPM3-211ENST00000368531 LGALS9CQ6DKI2 356 aa9.61□□□□□ -0.87
TPM3-211ENST00000368531 LYPD5Q6UWN5 251 aa9.61□□□□□ -0.87
TPM3-211ENST00000368531 NEXN-AS1Q8NBZ9 246 aa9.61□□□□□ -0.87
TPM3-211ENST00000368531 ATP6V0E2Q8NHE4 81 aa9.61□□□□□ -0.87
TPM3-211ENST00000368531 RPL36ALQ969Q0 106 aaKnown RBP9.61□□□□□ -0.87
TPM3-211ENST00000368531 BTF3L4Q96K17 158 aa9.61□□□□□ -0.87
TPM3-211ENST00000368531 IMMP2LQ96T52 175 aa9.61□□□□□ -0.87
TPM3-211ENST00000368531 LINC00588Q9Y4M8 146 aa9.61□□□□□ -0.87
TPM3-211ENST00000368531 TRBV10-1A0A0K0K1A3 114 aa9.6□□□□□ -0.87
TPM3-211ENST00000368531 LCE6AA0A183 80 aa9.6□□□□□ -0.87
TPM3-211ENST00000368531 A0A1B0GW15 77 aa9.6□□□□□ -0.87
TPM3-211ENST00000368531 A0A1B0GXF2 115 aa9.6□□□□□ -0.87
TPM3-211ENST00000368531 H7C1H1 209 aa9.6□□□□□ -0.87
TPM3-211ENST00000368531 RAB4AP20338 218 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms