RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 SCRT2Q9NQ03 307 aa11.55□□□□□ -0.56
LMNA-203ENST00000368297 MDFICQ9P1T7 246 aa11.55□□□□□ -0.56
LMNA-203ENST00000368297 SPRY2O43597 315 aa11.54□□□□□ -0.56
LMNA-203ENST00000368297 FA2HQ7L5A8 372 aa11.54□□□□□ -0.56
LMNA-203ENST00000368297 RNF185Q96GF1 192 aa11.54□□□□□ -0.56
LMNA-203ENST00000368297 SCGB1D1O95968 90 aa11.53□□□□□ -0.56
LMNA-203ENST00000368297 ZNF415Q09FC8 603 aa11.53□□□□□ -0.56
LMNA-203ENST00000368297 KPRPQ5T749 579 aaPredicted RBP11.53□□□□□ -0.56
LMNA-203ENST00000368297 FAM19A2Q8N3H0 131 aa11.53□□□□□ -0.56
LMNA-203ENST00000368297 A8MZ25 164 aa11.52□□□□□ -0.56
LMNA-203ENST00000368297 M0R381 172 aa11.52□□□□□ -0.56
LMNA-203ENST00000368297 EVI2AP22794 236 aa11.52□□□□□ -0.56
LMNA-203ENST00000368297 DEFB135Q30KP9 77 aa11.52□□□□□ -0.56
LMNA-203ENST00000368297 Q6ZWC4 215 aa11.52□□□□□ -0.56
LMNA-203ENST00000368297 AZU1P20160 251 aa11.52□□□□□ -0.57
LMNA-203ENST00000368297 ZNF705AQ6ZN79 300 aaPredicted RBP11.52□□□□□ -0.57
LMNA-203ENST00000368297 URB1-AS1Q96HZ7 61 aa11.52□□□□□ -0.57
LMNA-203ENST00000368297 C9orf85Q96MD7 179 aa11.52□□□□□ -0.57
LMNA-203ENST00000368297 AP5S1Q9NUS5 200 aa11.52□□□□□ -0.57
LMNA-203ENST00000368297 RRN3P1Q2M238 152 aa11.51□□□□□ -0.57
LMNA-203ENST00000368297 CDPF1Q6NVV7 123 aa11.51□□□□□ -0.57
LMNA-203ENST00000368297 MAP1LC3AQ9H492 121 aa11.51□□□□□ -0.57
LMNA-203ENST00000368297 DPH3P1Q9H4G8 78 aa11.51□□□□□ -0.57
LMNA-203ENST00000368297 KRTDAPP60985 99 aa11.5□□□□□ -0.57
LMNA-203ENST00000368297 PKIAP61925 76 aa11.5□□□□□ -0.57
LMNA-203ENST00000368297 SYT8Q8NBV8 401 aa11.5□□□□□ -0.57
LMNA-203ENST00000368297 MRAP2Q96G30 205 aa11.5□□□□□ -0.57
LMNA-203ENST00000368297 AP1S3Q96PC3 154 aa11.5□□□□□ -0.57
LMNA-203ENST00000368297 LOC389332A0A1B0GUA5 103 aa11.49□□□□□ -0.57
LMNA-203ENST00000368297 SMKR1H3BMG3 65 aa11.49□□□□□ -0.57
LMNA-203ENST00000368297 NXPH4O95158 308 aa11.49□□□□□ -0.57
LMNA-203ENST00000368297 TMEM263Q8WUH6 116 aaKnown RBP11.49□□□□□ -0.57
LMNA-203ENST00000368297 NCR2O95944 276 aa11.49□□□□□ -0.57
LMNA-203ENST00000368297 NPYP01303 97 aa11.49□□□□□ -0.57
LMNA-203ENST00000368297 SMIM17P0DL12 118 aa11.49□□□□□ -0.57
LMNA-203ENST00000368297 IFI27P40305 119 aaPredicted RBP11.49□□□□□ -0.57
LMNA-203ENST00000368297 C11orf72Q8NBR9 251 aa11.49□□□□□ -0.57
LMNA-203ENST00000368297 C16orf74Q96GX8 76 aa11.49□□□□□ -0.57
LMNA-203ENST00000368297 IGHV1-24A0A0C4DH33 117 aa11.48□□□□□ -0.57
LMNA-203ENST00000368297 TSTD3H0UI37 97 aa11.48□□□□□ -0.57
LMNA-203ENST00000368297 K7EIL1 84 aa11.48□□□□□ -0.57
LMNA-203ENST00000368297 TNFRSF6BO95407 300 aa11.48□□□□□ -0.57
LMNA-203ENST00000368297 DEFB121Q5J5C9 76 aa11.48□□□□□ -0.57
LMNA-203ENST00000368297 RNASE8Q8TDE3 154 aaKnown RBP11.48□□□□□ -0.57
LMNA-203ENST00000368297 SPXQ9BT56 116 aa11.48□□□□□ -0.57
LMNA-203ENST00000368297 NXT2Q9NPJ8 142 aaKnown RBP11.47□□□□□ -0.57
LMNA-203ENST00000368297 HSPB8Q9UJY1 196 aa11.47□□□□□ -0.57
LMNA-203ENST00000368297 SMIM9A6NGZ8 99 aa11.46□□□□□ -0.57
LMNA-203ENST00000368297 LEPROTL1O95214 131 aa11.46□□□□□ -0.57
LMNA-203ENST00000368297 PPP1R17O96001 155 aa11.46□□□□□ -0.57
LMNA-203ENST00000368297 DEFA6Q01524 100 aa11.46□□□□□ -0.57
LMNA-203ENST00000368297 ZNF876PQ49A33 203 aa11.46□□□□□ -0.57
LMNA-203ENST00000368297 C14orf178Q8N769 122 aaPredicted RBP11.46□□□□□ -0.57
LMNA-203ENST00000368297 OR11H2Q8NH07 326 aa11.46□□□□□ -0.57
LMNA-203ENST00000368297 RNF183Q96D59 192 aa11.46□□□□□ -0.57
LMNA-203ENST00000368297 X6R8D5 127 aa11.46□□□□□ -0.57
LMNA-203ENST00000368297 M0R2P5 195 aa11.46□□□□□ -0.58
LMNA-203ENST00000368297 MUC4Q99102 2169 aa11.45□□□□□ -0.58
LMNA-203ENST00000368297 C3orf79P0CE67 100 aa11.45□□□□□ -0.58
LMNA-203ENST00000368297 BTF3P20290 206 aaKnown RBP11.45□□□□□ -0.58
LMNA-203ENST00000368297 EMP1P54849 157 aa11.45□□□□□ -0.58
LMNA-203ENST00000368297 PMCHL1Q16048 86 aa11.45□□□□□ -0.58
LMNA-203ENST00000368297 MRPL16Q9NX20 251 aaKnown RBP11.45□□□□□ -0.58
LMNA-203ENST00000368297 PRSS47A8MTI9 375 aa11.44□□□□□ -0.58
LMNA-203ENST00000368297 MGPP08493 103 aa11.44□□□□□ -0.58
LMNA-203ENST00000368297 DDTP30046 118 aa11.43□□□□□ -0.58
LMNA-203ENST00000368297 Q8N8P6 123 aa11.43□□□□□ -0.58
LMNA-203ENST00000368297 IL17DQ8TAD2 202 aa11.43□□□□□ -0.58
LMNA-203ENST00000368297 TMEM70Q9BUB7 260 aa11.43□□□□□ -0.58
LMNA-203ENST00000368297 NOP10Q9NPE3 64 aaKnown RBP11.43□□□□□ -0.58
LMNA-203ENST00000368297 NOTCH1P46531 2555 aa11.43□□□□□ -0.58
LMNA-203ENST00000368297 MGAM2Q2M2H8 2515 aa11.43□□□□□ -0.58
LMNA-203ENST00000368297 TRGV1A0A0A0MS02 117 aa11.43□□□□□ -0.58
LMNA-203ENST00000368297 POM121L12Q8N7R1 296 aa11.43□□□□□ -0.58
LMNA-203ENST00000368297 NRACQ8N912 160 aa11.43□□□□□ -0.58
LMNA-203ENST00000368297 PTH2Q96A98 100 aa11.43□□□□□ -0.58
LMNA-203ENST00000368297 MAP1LC3CQ9BXW4 147 aa11.43□□□□□ -0.58
LMNA-203ENST00000368297 JPT2Q9H910 190 aa11.43□□□□□ -0.58
LMNA-203ENST00000368297 RETNQ9HD89 108 aa11.43□□□□□ -0.58
LMNA-203ENST00000368297 TRAV26-2A0A0B4J265 109 aa11.42□□□□□ -0.58
LMNA-203ENST00000368297 PLAC8L1A1L4L8 177 aa11.42□□□□□ -0.58
LMNA-203ENST00000368297 LINC01546A6NGU7 62 aa11.42□□□□□ -0.58
LMNA-203ENST00000368297 GAS8-AS1O95177 125 aa11.42□□□□□ -0.58
LMNA-203ENST00000368297 MIFP14174 115 aa11.42□□□□□ -0.58
LMNA-203ENST00000368297 GATA1P15976 413 aaPredicted RBP11.42□□□□□ -0.58
LMNA-203ENST00000368297 C14orf144Q96I85 54 aa11.42□□□□□ -0.58
LMNA-203ENST00000368297 C20orf78Q9BR46 151 aa11.42□□□□□ -0.58
LMNA-203ENST00000368297 TP53TG1Q9Y2A0 90 aa11.42□□□□□ -0.58
LMNA-203ENST00000368297 DNAH3Q8TD57 4116 aa11.41□□□□□ -0.58
LMNA-203ENST00000368297 C20orf202A1L168 122 aa11.41□□□□□ -0.58
LMNA-203ENST00000368297 HBDP02042 147 aa11.41□□□□□ -0.58
LMNA-203ENST00000368297 DAZ2Q13117 558 aaKnown RBP11.41□□□□□ -0.58
LMNA-203ENST00000368297 MRAPQ8TCY5 172 aa11.41□□□□□ -0.58
LMNA-203ENST00000368297 OVOL2Q9BRP0 275 aa11.41□□□□□ -0.58
LMNA-203ENST00000368297 KIF25-AS1Q9Y6Z4 181 aa11.41□□□□□ -0.58
LMNA-203ENST00000368297 A0A087WWL8 130 aa11.4□□□□□ -0.58
LMNA-203ENST00000368297 IGHV4-28A0A0C4DH34 117 aa11.4□□□□□ -0.58
LMNA-203ENST00000368297 FAM74A4Q5TZK3 123 aa11.4□□□□□ -0.58
LMNA-203ENST00000368297 TEX43Q6ZNM6 134 aa11.4□□□□□ -0.58
LMNA-203ENST00000368297 Q6ZTI0 123 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms