RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SMIM12Q96EX1 92 aa6.76□□□□□ -1.33
CD48-202ENST00000368046 DERL1Q9BUN8 251 aa6.76□□□□□ -1.33
CD48-202ENST00000368046 JPT2Q9H910 190 aa6.76□□□□□ -1.33
CD48-202ENST00000368046 MUC4Q99102 2169 aa6.75□□□□□ -1.33
CD48-202ENST00000368046 LOC100131303A0A0U1RQF7 123 aa6.75□□□□□ -1.33
CD48-202ENST00000368046 RAB19A4D1S5 217 aa6.75□□□□□ -1.33
CD48-202ENST00000368046 NXPH4O95158 308 aa6.75□□□□□ -1.33
CD48-202ENST00000368046 IGLV2-8P01709 118 aa6.75□□□□□ -1.33
CD48-202ENST00000368046 CXCL1P09341 107 aa6.75□□□□□ -1.33
CD48-202ENST00000368046 MED14OSP0DP75 135 aa6.75□□□□□ -1.33
CD48-202ENST00000368046 BTF3P20290 206 aaKnown RBP6.75□□□□□ -1.33
CD48-202ENST00000368046 NKX2-5P52952 324 aaPredicted RBP6.75□□□□□ -1.33
CD48-202ENST00000368046 PRR27Q6MZM9 219 aa6.75□□□□□ -1.33
CD48-202ENST00000368046 LYPD6BQ8NI32 183 aa6.75□□□□□ -1.33
CD48-202ENST00000368046 SFRP2Q96HF1 295 aa6.75□□□□□ -1.33
CD48-202ENST00000368046 PARLQ9H300 379 aa6.75□□□□□ -1.33
CD48-202ENST00000368046 BIRC6Q9NR09 4857 aa6.75□□□□□ -1.33
CD48-202ENST00000368046 FRAS1Q86XX4 4008 aa6.75□□□□□ -1.33
CD48-202ENST00000368046 DNAH6Q9C0G6 4158 aa6.74□□□□□ -1.33
CD48-202ENST00000368046 DNAH17Q9UFH2 4485 aa6.74□□□□□ -1.33
CD48-202ENST00000368046 TRAV9-2A0A087WT02 112 aa6.74□□□□□ -1.33
CD48-202ENST00000368046 A0A1B0GVY2 172 aa6.74□□□□□ -1.33
CD48-202ENST00000368046 RBFOX3A6NFN3 312 aa6.74□□□□□ -1.33
CD48-202ENST00000368046 GNG4P50150 75 aa6.74□□□□□ -1.33
CD48-202ENST00000368046 TIRAPP58753 221 aa6.74□□□□□ -1.33
CD48-202ENST00000368046 RPL19P84098 196 aaKnown RBP6.74□□□□□ -1.33
CD48-202ENST00000368046 UFSP1Q6NVU6 142 aa6.74□□□□□ -1.33
CD48-202ENST00000368046 Q6ZSN1 163 aa6.74□□□□□ -1.33
CD48-202ENST00000368046 ZFP82Q8N141 532 aa6.74□□□□□ -1.33
CD48-202ENST00000368046 DAZAP1Q96EP5 407 aaKnown RBP6.74□□□□□ -1.33
CD48-202ENST00000368046 SAMD10Q9BYL1 202 aa6.74□□□□□ -1.33
CD48-202ENST00000368046 BIN3Q9NQY0 253 aa6.74□□□□□ -1.33
CD48-202ENST00000368046 K7EP13 123 aa6.73□□□□□ -1.33
CD48-202ENST00000368046 M0R381 172 aa6.73□□□□□ -1.33
CD48-202ENST00000368046 RHODO00212 210 aa6.73□□□□□ -1.33
CD48-202ENST00000368046 CRYGDP07320 174 aa6.73□□□□□ -1.33
CD48-202ENST00000368046 CENPWQ5EE01 88 aa6.73□□□□□ -1.33
CD48-202ENST00000368046 KRTAP1-5Q9BYS1 174 aa6.73□□□□□ -1.33
CD48-202ENST00000368046 NACAE9PAV3 2078 aa6.73□□□□□ -1.33
CD48-202ENST00000368046 C19orf71A6NCJ1 209 aa6.72□□□□□ -1.33
CD48-202ENST00000368046 SNAI2O43623 268 aa6.72□□□□□ -1.33
CD48-202ENST00000368046 OR5AL1P0C617 328 aa6.72□□□□□ -1.33
CD48-202ENST00000368046 RPS20P60866 119 aaKnown RBP6.72□□□□□ -1.33
CD48-202ENST00000368046 ATP6V0E2Q8NHE4 81 aa6.72□□□□□ -1.33
CD48-202ENST00000368046 LY96Q9Y6Y9 160 aa6.72□□□□□ -1.33
CD48-202ENST00000368046 FAT2Q9NYQ8 4349 aa6.72□□□□□ -1.33
CD48-202ENST00000368046 TRBV20OR9-2A0A075B6H5 130 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 A0A087WWL8 130 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 XKRY2A2RUG3 117 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 GAGE12JA6NER3 117 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 TMEM250H0YL14 139 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 DNAH10OSP0CZ25 163 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 EVI2AP22794 236 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 GAGE1Q13065 139 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 GAGE4Q13068 117 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 GAGE5Q13069 117 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 GAGE13Q4V321 117 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 FAM74A4Q5TZK3 123 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 SPANXN1Q5VSR9 72 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 WFDC10BQ8IUB3 73 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 OR2D3Q8NGH3 330 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 OR10AG1Q8NH19 301 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 OCC1Q8TAD7 63 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 GTSF1LQ9H1H1 148 aa6.71□□□□□ -1.34
CD48-202ENST00000368046 TRAV8-6A0A0B4J262 113 aa6.7□□□□□ -1.34
CD48-202ENST00000368046 F2Z2F3 143 aa6.7□□□□□ -1.34
CD48-202ENST00000368046 NDUFS6O75380 124 aaKnown RBP6.7□□□□□ -1.34
CD48-202ENST00000368046 P01737 135 aa6.7□□□□□ -1.34
CD48-202ENST00000368046 LELP1Q5T871 98 aa6.7□□□□□ -1.34
CD48-202ENST00000368046 C14orf178Q8N769 122 aaPredicted RBP6.7□□□□□ -1.34
CD48-202ENST00000368046 NUDT10Q8NFP7 164 aa6.7□□□□□ -1.34
CD48-202ENST00000368046 NUDT11Q96G61 164 aa6.7□□□□□ -1.34
CD48-202ENST00000368046 EIF5A2Q9GZV4 153 aaKnown RBP6.7□□□□□ -1.34
CD48-202ENST00000368046 Q9UF83 564 aa6.7□□□□□ -1.34
CD48-202ENST00000368046 PKD1P98161 4303 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 IGHV3-38A0A0C4DH36 116 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 MUC21A0A0G2JKD1 596 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 TRBV10-1A0A0K0K1A3 114 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 MUC21A0A140T8X8 626 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 IGLC6P0CF74 106 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 GZMBP10144 247 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 LINC00315P59091 139 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 RAB4BP61018 213 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 SSTP61278 116 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 OR10J3Q5JRS4 329 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 NFE4Q86UQ8 179 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 FER1L6-AS1Q8NA97 138 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 FAM210AQ96ND0 272 aa6.69□□□□□ -1.34
CD48-202ENST00000368046 A0A087WWC5 75 aa6.68□□□□□ -1.34
CD48-202ENST00000368046 RPL36AP83881 106 aaKnown RBP6.68□□□□□ -1.34
CD48-202ENST00000368046 TEX261Q6UWH6 196 aa6.68□□□□□ -1.34
CD48-202ENST00000368046 RPL36ALQ969Q0 106 aaKnown RBP6.68□□□□□ -1.34
CD48-202ENST00000368046 TNFRSF18Q9Y5U5 241 aa6.68□□□□□ -1.34
CD48-202ENST00000368046 TRBV7-3A0A075B6L6 115 aa6.67□□□□□ -1.34
CD48-202ENST00000368046 K7EN84 100 aa6.67□□□□□ -1.34
CD48-202ENST00000368046 SMIM17P0DL12 118 aa6.67□□□□□ -1.34
CD48-202ENST00000368046 LINC00694P0DN24 101 aa6.67□□□□□ -1.34
CD48-202ENST00000368046 CACNG7P62955 275 aa6.67□□□□□ -1.34
CD48-202ENST00000368046 LINC01556Q5JQF7 62 aa6.67□□□□□ -1.34
CD48-202ENST00000368046 TOR2AQ5JU69 321 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms