RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 DAZAP1Q96EP5 407 aaKnown RBP9.03□□□□□ -0.96
USF1-203ENST00000368021 C8orf49Q96NF6 230 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 SELENOKQ9Y6D0 94 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 SORL1Q92673 2214 aa9.02□□□□□ -0.96
USF1-203ENST00000368021 EBLN2Q6P2I7 272 aa9.02□□□□□ -0.97
USF1-203ENST00000368021 WFDC3Q8IUB2 231 aa9.02□□□□□ -0.97
USF1-203ENST00000368021 TMEM61Q8N0U2 210 aa9.02□□□□□ -0.97
USF1-203ENST00000368021 SPANXDQ9BXN6 97 aa9.02□□□□□ -0.97
USF1-203ENST00000368021 NOTCH3Q9UM47 2321 aa9.01□□□□□ -0.97
USF1-203ENST00000368021 TEX48A0A1B0GUV7 120 aa9.01□□□□□ -0.97
USF1-203ENST00000368021 H3BUT2 72 aa9.01□□□□□ -0.97
USF1-203ENST00000368021 SMIM13P0DJ93 91 aa9.01□□□□□ -0.97
USF1-203ENST00000368021 CRIP1P50238 77 aa9.01□□□□□ -0.97
USF1-203ENST00000368021 RCHY1Q96PM5 261 aa9.01□□□□□ -0.97
USF1-203ENST00000368021 SPAG8Q99932 426 aaPredicted RBP9.01□□□□□ -0.97
USF1-203ENST00000368021 RPP21Q9H633 154 aaKnown RBP9.01□□□□□ -0.97
USF1-203ENST00000368021 FBN3Q75N90 2809 aa9.01□□□□□ -0.97
USF1-203ENST00000368021 F2Z2F3 143 aa9.01□□□□□ -0.97
USF1-203ENST00000368021 ZNF688P0C7X2 276 aa9.01□□□□□ -0.97
USF1-203ENST00000368021 PRR31Q5SQ13 230 aa9.01□□□□□ -0.97
USF1-203ENST00000368021 ASCL2Q99929 193 aa9.01□□□□□ -0.97
USF1-203ENST00000368021 A8MWL6 223 aa9□□□□□ -0.97
USF1-203ENST00000368021 KIR3DS1Q14943 382 aa9□□□□□ -0.97
USF1-203ENST00000368021 SAMD5Q5TGI4 173 aa9□□□□□ -0.97
USF1-203ENST00000368021 LINC01545Q5VT33 79 aa9□□□□□ -0.97
USF1-203ENST00000368021 ATOH7Q8N100 152 aa9□□□□□ -0.97
USF1-203ENST00000368021 GFRA4Q9GZZ7 299 aa9□□□□□ -0.97
USF1-203ENST00000368021 TMEM262E9PQX1 116 aa8.99□□□□□ -0.97
USF1-203ENST00000368021 CA1P00915 261 aaPredicted RBP8.99□□□□□ -0.97
USF1-203ENST00000368021 PF4P02776 101 aa8.99□□□□□ -0.97
USF1-203ENST00000368021 FAM19A4Q96LR4 140 aa8.99□□□□□ -0.97
USF1-203ENST00000368021 HIGD1BQ9P298 99 aa8.99□□□□□ -0.97
USF1-203ENST00000368021 A0A0J9YX75 114 aa8.98□□□□□ -0.97
USF1-203ENST00000368021 FABP5P3A8MUU1 101 aa8.98□□□□□ -0.97
USF1-203ENST00000368021 F6UB75 175 aa8.98□□□□□ -0.97
USF1-203ENST00000368021 RNASEKQ6P5S7 137 aaKnown RBP8.98□□□□□ -0.97
USF1-203ENST00000368021 LINC00482Q8N8I6 264 aa8.98□□□□□ -0.97
USF1-203ENST00000368021 ODF3Q96PU9 254 aa8.98□□□□□ -0.97
USF1-203ENST00000368021 SPANXB1Q9NS25 103 aaPredicted RBP8.98□□□□□ -0.97
USF1-203ENST00000368021 NOTCH1P46531 2555 aa8.98□□□□□ -0.97
USF1-203ENST00000368021 SH2D1AO60880 128 aa8.98□□□□□ -0.97
USF1-203ENST00000368021 ZNF80P51504 273 aaPredicted RBP8.98□□□□□ -0.97
USF1-203ENST00000368021 DEFB1P60022 68 aa8.98□□□□□ -0.97
USF1-203ENST00000368021 LINC01559Q495D7 138 aa8.98□□□□□ -0.97
USF1-203ENST00000368021 APRG1Q8IVJ8 170 aa8.98□□□□□ -0.97
USF1-203ENST00000368021 FAM19A2Q8N3H0 131 aa8.98□□□□□ -0.97
USF1-203ENST00000368021 ZNF256Q9Y2P7 627 aaPredicted RBP8.98□□□□□ -0.97
USF1-203ENST00000368021 IGLV1-51P01701 117 aa8.97□□□□□ -0.97
USF1-203ENST00000368021 FOXA3P55318 350 aaPredicted RBP8.97□□□□□ -0.97
USF1-203ENST00000368021 ZFAND2AQ8N6M9 145 aa8.97□□□□□ -0.97
USF1-203ENST00000368021 ANAPC13Q9BS18 74 aa8.97□□□□□ -0.97
USF1-203ENST00000368021 HIGD1CA8MV81 97 aa8.96□□□□□ -0.97
USF1-203ENST00000368021 DUSP14O95147 198 aaKnown RBP8.96□□□□□ -0.97
USF1-203ENST00000368021 GDF5OSQ5U4N7 250 aa8.96□□□□□ -0.97
USF1-203ENST00000368021 C2orf91Q6ZV80 131 aa8.96□□□□□ -0.97
USF1-203ENST00000368021 BOD1L2Q8IYS8 172 aa8.96□□□□□ -0.97
USF1-203ENST00000368021 NUP35Q8NFH5 326 aa8.96□□□□□ -0.97
USF1-203ENST00000368021 HLA-DRB4P13762 266 aa8.96□□□□□ -0.98
USF1-203ENST00000368021 TAL2Q16559 108 aa8.96□□□□□ -0.98
USF1-203ENST00000368021 LYRM7Q5U5X0 104 aa8.96□□□□□ -0.98
USF1-203ENST00000368021 Q6AWC8 147 aa8.96□□□□□ -0.98
USF1-203ENST00000368021 GTSF1Q8WW33 167 aa8.96□□□□□ -0.98
USF1-203ENST00000368021 TMEM126AQ9H061 195 aa8.96□□□□□ -0.98
USF1-203ENST00000368021 HLA-DRB4X5D2U9 266 aa8.96□□□□□ -0.98
USF1-203ENST00000368021 KLLNB2CW77 178 aa8.95□□□□□ -0.98
USF1-203ENST00000368021 DEFB131AP59861 70 aa8.95□□□□□ -0.98
USF1-203ENST00000368021 HERV-K104P63124 156 aa8.95□□□□□ -0.98
USF1-203ENST00000368021 C1QTNF4Q9BXJ3 329 aa8.95□□□□□ -0.98
USF1-203ENST00000368021 MAP6D1Q9H9H5 199 aa8.95□□□□□ -0.98
USF1-203ENST00000368021 A8MTW9 85 aa8.94□□□□□ -0.98
USF1-203ENST00000368021 SPINK8P0C7L1 97 aa8.94□□□□□ -0.98
USF1-203ENST00000368021 AGRNO00468 2067 aa8.94□□□□□ -0.98
USF1-203ENST00000368021 MEGF8Q7Z7M0 2845 aa8.94□□□□□ -0.98
USF1-203ENST00000368021 TRAV21A0A0B4J279 112 aa8.94□□□□□ -0.98
USF1-203ENST00000368021 A0A1B0GW15 77 aa8.94□□□□□ -0.98
USF1-203ENST00000368021 LEPP41159 167 aa8.94□□□□□ -0.98
USF1-203ENST00000368021 INSL3P51460 131 aa8.94□□□□□ -0.98
USF1-203ENST00000368021 CMC4P56277 68 aaPredicted RBP8.94□□□□□ -0.98
USF1-203ENST00000368021 PRR9Q5T870 116 aa8.94□□□□□ -0.98
USF1-203ENST00000368021 ZFAND6Q6FIF0 208 aa8.94□□□□□ -0.98
USF1-203ENST00000368021 H3BMG7 143 aa8.93□□□□□ -0.98
USF1-203ENST00000368021 ORM1P02763 201 aa8.93□□□□□ -0.98
USF1-203ENST00000368021 RPL32P62910 135 aaKnown RBP8.93□□□□□ -0.98
USF1-203ENST00000368021 ODF1Q14990 250 aa8.93□□□□□ -0.98
USF1-203ENST00000368021 LGALS9BQ3B8N2 356 aa8.93□□□□□ -0.98
USF1-203ENST00000368021 C5orf47Q569G3 176 aa8.93□□□□□ -0.98
USF1-203ENST00000368021 LGALS9CQ6DKI2 356 aa8.93□□□□□ -0.98
USF1-203ENST00000368021 H3BMM0 161 aa8.92□□□□□ -0.98
USF1-203ENST00000368021 WIPF1O43516 503 aa8.92□□□□□ -0.98
USF1-203ENST00000368021 ODF3L2Q3SX64 289 aa8.92□□□□□ -0.98
USF1-203ENST00000368021 KIAA1644Q3SXP7 199 aa8.92□□□□□ -0.98
USF1-203ENST00000368021 Q6Q795 121 aa8.92□□□□□ -0.98
USF1-203ENST00000368021 AMTNQ6UX39 209 aa8.92□□□□□ -0.98
USF1-203ENST00000368021 ZNF575Q86XF7 245 aa8.92□□□□□ -0.98
USF1-203ENST00000368021 IGKV3D-20A0A0C4DH25 116 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 IGHV1-24A0A0C4DH33 117 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 A0A1B0GXF2 115 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 hDV102S1A0JD36 115 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 GAGE12JA6NER3 117 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 GAGE7O76087 117 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms