RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 ZNF491Q8N8L2 437 aa9.78□□□□□ -0.84
TPR-201ENST00000367478 CCL24O00175 119 aa9.78□□□□□ -0.84
TPR-201ENST00000367478 ALPK3Q96L96 1907 aa9.77□□□□□ -0.85
TPR-201ENST00000367478 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.85
TPR-201ENST00000367478 TMEM105Q8N8V8 129 aa9.77□□□□□ -0.85
TPR-201ENST00000367478 FAM120AOSQ5T036 256 aa9.77□□□□□ -0.85
TPR-201ENST00000367478 VPREB3Q9UKI3 123 aa9.77□□□□□ -0.85
TPR-201ENST00000367478 WIPF3A6NGB9 483 aa9.76□□□□□ -0.85
TPR-201ENST00000367478 PCNX3Q9H6A9 2034 aa9.76□□□□□ -0.85
TPR-201ENST00000367478 G3V4G9 280 aa9.76□□□□□ -0.85
TPR-201ENST00000367478 E9PLD3 99 aa9.76□□□□□ -0.85
TPR-201ENST00000367478 A0A096LPF7 62 aa9.76□□□□□ -0.85
TPR-201ENST00000367478 B9D2Q9BPU9 175 aa9.76□□□□□ -0.85
TPR-201ENST00000367478 C14orf177Q52M58 125 aa9.76□□□□□ -0.85
TPR-201ENST00000367478 Q6ZQT7 251 aa9.76□□□□□ -0.85
TPR-201ENST00000367478 PIFOQ8TCI5 191 aa9.76□□□□□ -0.85
TPR-201ENST00000367478 LYPD6BQ8NI32 183 aa9.76□□□□□ -0.85
TPR-201ENST00000367478 VWCEQ96DN2 955 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 Q96MF0 132 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 C11orf86A6NJI1 115 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 PRB1P04280 392 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 KIAA1549LQ6ZVL6 1849 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 BPY2O14599 106 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 UPK3BQ9BT76 320 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 C15orf65H3BRN8 121 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 K7EN84 100 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 GNRH2O43555 120 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 MED14OSP0DP75 135 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 Q0VFX4 171 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 PRR20EP86478 221 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 PRR20CP86479 221 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 PRR20DP86480 221 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 PRR20BP86481 221 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 PRR20AP86496 221 aa9.75□□□□□ -0.85
TPR-201ENST00000367478 TOMM6Q96B49 74 aa9.74□□□□□ -0.85
TPR-201ENST00000367478 ZNF106Q9H2Y7 1883 aaKnown RBP9.74□□□□□ -0.85
TPR-201ENST00000367478 UNQ6494/PRO21346Q6UXR6 183 aa9.74□□□□□ -0.85
TPR-201ENST00000367478 PRB2P02812 416 aaPredicted RBP9.74□□□□□ -0.85
TPR-201ENST00000367478 HIVEP2P31629 2446 aa9.74□□□□□ -0.85
TPR-201ENST00000367478 LECT2O14960 151 aa9.73□□□□□ -0.85
TPR-201ENST00000367478 LY6HO94772 140 aa9.73□□□□□ -0.85
TPR-201ENST00000367478 LOXP28300 417 aaPredicted RBP9.73□□□□□ -0.85
TPR-201ENST00000367478 SP5Q6BEB4 398 aaPredicted RBP9.73□□□□□ -0.85
TPR-201ENST00000367478 AGPAT4-IT1Q9H0P7 198 aa9.73□□□□□ -0.85
TPR-201ENST00000367478 CACNA1AO00555 2505 aa9.73□□□□□ -0.85
TPR-201ENST00000367478 A0A0J9YY99 117 aa9.72□□□□□ -0.85
TPR-201ENST00000367478 C3orf22Q8N5N4 141 aa9.72□□□□□ -0.85
TPR-201ENST00000367478 FAM110AQ9BQ89 295 aa9.72□□□□□ -0.85
TPR-201ENST00000367478 IGLV3-9A0A075B6K5 115 aa9.72□□□□□ -0.85
TPR-201ENST00000367478 WFDC2Q14508 124 aa9.72□□□□□ -0.85
TPR-201ENST00000367478 HHLA3Q9XRX5 114 aa9.72□□□□□ -0.85
TPR-201ENST00000367478 ACACBO00763 2458 aa9.72□□□□□ -0.85
TPR-201ENST00000367478 IGFL3Q6UXB1 125 aa9.72□□□□□ -0.85
TPR-201ENST00000367478 KIAA1671Q9BY89 1806 aa9.72□□□□□ -0.85
TPR-201ENST00000367478 FAM236DA0A1B0GTK5 79 aa9.72□□□□□ -0.85
TPR-201ENST00000367478 FAM236CP0DP71 79 aa9.72□□□□□ -0.85
TPR-201ENST00000367478 ZNF581Q9P0T4 197 aa9.72□□□□□ -0.85
TPR-201ENST00000367478 NDUFV3P56181 108 aaKnown RBP9.71□□□□□ -0.85
TPR-201ENST00000367478 WDR86Q86TI4 376 aa9.71□□□□□ -0.85
TPR-201ENST00000367478 RPL39LQ96EH5 51 aaKnown RBP9.71□□□□□ -0.85
TPR-201ENST00000367478 COX7BP24311 80 aa9.71□□□□□ -0.85
TPR-201ENST00000367478 C10orf105Q8TEF2 133 aa9.71□□□□□ -0.86
TPR-201ENST00000367478 ZNRD1Q9P1U0 126 aa9.71□□□□□ -0.86
TPR-201ENST00000367478 ANKHD1Q8IWZ3 2542 aaKnown RBP9.71□□□□□ -0.86
TPR-201ENST00000367478 C5orf24Q7Z6I8 188 aa9.71□□□□□ -0.86
TPR-201ENST00000367478 RNF183Q96D59 192 aa9.7□□□□□ -0.86
TPR-201ENST00000367478 C17orf77Q96MU5 243 aa9.7□□□□□ -0.86
TPR-201ENST00000367478 NOTCH4Q99466 2003 aa9.7□□□□□ -0.86
TPR-201ENST00000367478 CCDC168Q8NDH2 2452 aa9.7□□□□□ -0.86
TPR-201ENST00000367478 IGLV1-44P01699 117 aa9.7□□□□□ -0.86
TPR-201ENST00000367478 WI2-2373I1.2A0A1W2PRP0 233 aa9.7□□□□□ -0.86
TPR-201ENST00000367478 KLK5Q9Y337 293 aaPredicted RBP9.7□□□□□ -0.86
TPR-201ENST00000367478 C16orf54Q6UWD8 224 aa9.69□□□□□ -0.86
TPR-201ENST00000367478 K7ENP7 123 aa9.69□□□□□ -0.86
TPR-201ENST00000367478 RNF144BQ7Z419 303 aa9.69□□□□□ -0.86
TPR-201ENST00000367478 LYRM9A8MSI8 78 aa9.69□□□□□ -0.86
TPR-201ENST00000367478 SPAG11BQ08648 103 aa9.69□□□□□ -0.86
TPR-201ENST00000367478 TEX22C9J3V5 150 aa9.69□□□□□ -0.86
TPR-201ENST00000367478 FANCD2OSQ96PS1 177 aa9.69□□□□□ -0.86
TPR-201ENST00000367478 IGLV10-54A0A075B6I4 117 aa9.69□□□□□ -0.86
TPR-201ENST00000367478 HOXB4P17483 251 aaPredicted RBP9.69□□□□□ -0.86
TPR-201ENST00000367478 FXYD2P54710 66 aa9.68□□□□□ -0.86
TPR-201ENST00000367478 NPBQ8NG41 125 aa9.68□□□□□ -0.86
TPR-201ENST00000367478 IL17DQ8TAD2 202 aa9.68□□□□□ -0.86
TPR-201ENST00000367478 ATG2AQ2TAZ0 1938 aa9.68□□□□□ -0.86
TPR-201ENST00000367478 ABCA2Q9BZC7 2435 aa9.68□□□□□ -0.86
TPR-201ENST00000367478 TRAV23DV6A0A075B6W5 121 aa9.68□□□□□ -0.86
TPR-201ENST00000367478 CTRLP40313 264 aa9.68□□□□□ -0.86
TPR-201ENST00000367478 TPSG1Q9NRR2 321 aa9.68□□□□□ -0.86
TPR-201ENST00000367478 MIAQ16674 131 aa9.67□□□□□ -0.86
TPR-201ENST00000367478 HIST2H2BDQ6DRA6 164 aa9.67□□□□□ -0.86
TPR-201ENST00000367478 A0A0J9YXV3 536 aa9.67□□□□□ -0.86
TPR-201ENST00000367478 TRBV10-1A0A0K0K1A3 114 aa9.67□□□□□ -0.86
TPR-201ENST00000367478 GP9P14770 177 aa9.67□□□□□ -0.86
TPR-201ENST00000367478 TRAV26-1A0A087WT03 109 aa9.67□□□□□ -0.86
TPR-201ENST00000367478 MPLKIPQ8TAP9 179 aa9.66□□□□□ -0.86
TPR-201ENST00000367478 ANKRD39Q53RE8 183 aa9.66□□□□□ -0.86
TPR-201ENST00000367478 MIR7-3HGQ8N6C7 128 aa9.66□□□□□ -0.86
TPR-201ENST00000367478 NCR3O14931 201 aa9.66□□□□□ -0.86
TPR-201ENST00000367478 TANC1Q9C0D5 1861 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms