RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 MYLKQ15746 1914 aa6.96□□□□□ -1.3
SYNE1-209ENST00000367257 IGFL2Q6UWQ7 119 aa6.96□□□□□ -1.3
SYNE1-209ENST00000367257 PRO3102Q9H379 93 aa6.96□□□□□ -1.3
SYNE1-209ENST00000367257 PPDPFQ9H3Y8 114 aa6.96□□□□□ -1.3
SYNE1-209ENST00000367257 IGLV11-55A0A075B6I3 123 aa6.96□□□□□ -1.3
SYNE1-209ENST00000367257 I3L2K1 104 aa6.96□□□□□ -1.3
SYNE1-209ENST00000367257 K7EQD1 137 aa6.96□□□□□ -1.3
SYNE1-209ENST00000367257 COX7CP15954 63 aa6.96□□□□□ -1.3
SYNE1-209ENST00000367257 Q9H8V8 135 aa6.96□□□□□ -1.3
SYNE1-209ENST00000367257 FREM3P0C091 2139 aa6.96□□□□□ -1.3
SYNE1-209ENST00000367257 WI2-2373I1.2A0A1W2PRP0 233 aa6.95□□□□□ -1.3
SYNE1-209ENST00000367257 FAM120AOSQ5T036 256 aa6.95□□□□□ -1.3
SYNE1-209ENST00000367257 DYNAPQ8N1N2 210 aa6.95□□□□□ -1.3
SYNE1-209ENST00000367257 SPTSSBQ8NFR3 76 aa6.95□□□□□ -1.3
SYNE1-209ENST00000367257 ODF3Q96PU9 254 aa6.95□□□□□ -1.3
SYNE1-209ENST00000367257 MPDZO75970 2070 aa6.95□□□□□ -1.3
SYNE1-209ENST00000367257 TCL1BO95988 128 aa6.95□□□□□ -1.3
SYNE1-209ENST00000367257 SPEGQ15772 3267 aa6.95□□□□□ -1.3
SYNE1-209ENST00000367257 HOXB4P17483 251 aaPredicted RBP6.95□□□□□ -1.3
SYNE1-209ENST00000367257 C9orf66Q5T8R8 295 aa6.95□□□□□ -1.3
SYNE1-209ENST00000367257 UFSP1Q6NVU6 142 aa6.95□□□□□ -1.3
SYNE1-209ENST00000367257 WNK2Q9Y3S1 2297 aa6.95□□□□□ -1.3
SYNE1-209ENST00000367257 PRB4P10163 310 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-209ENST00000367257 PLA2G2CQ5R387 149 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 PRO0628Q9UI54 55 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 G3V318 75 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 ANGP03950 147 aaKnown RBP6.94□□□□□ -1.3
SYNE1-209ENST00000367257 LINC00205P59089 165 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 MYOFQ9NZM1 2061 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 TRAV26-2A0A0B4J265 109 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 TRBV10-1A0A0K0K1A3 114 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 ATP5EP56381 51 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-209ENST00000367257 TM2D2Q9BX73 214 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 ETDCA0A1B0GVM5 59 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 LY6DQ14210 128 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 C20orf197Q8N268 126 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 COX7B2Q8TF08 81 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 VSIG2Q96IQ7 327 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 PLXNA2O75051 1894 aa6.94□□□□□ -1.3
SYNE1-209ENST00000367257 TRAV4A0A0B4J268 109 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 LY6G6EA0A0G2JKS1 128 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 SP5Q6BEB4 398 aaPredicted RBP6.93□□□□□ -1.3
SYNE1-209ENST00000367257 U3KQA8 63 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 SMIM26A0A096LP01 95 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 TMEM256-PLSCR3K7ERE1 68 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 RUSC1-AS1Q66K80 236 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 LYPD6Q86Y78 171 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 TTTY13Q9BZ97 58 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 SND1-IT1Q9HBX3 110 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 CFAP54Q96N23 3096 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 DOCK8Q8NF50 2099 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 IGHV1-58A0A0C4DH39 117 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 H7C423 109 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 COX7A2LO14548 114 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 MUSTN1Q8IVN3 82 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 SERP2Q8N6R1 65 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 ZMAT4Q9H898 229 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 ARFGEF3Q5TH69 2177 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 ALPK2Q86TB3 2170 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 HEATR5AQ86XA9 2040 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 FSTL3O95633 263 aa6.93□□□□□ -1.3
SYNE1-209ENST00000367257 COL6A6A6NMZ7 2263 aa6.92□□□□□ -1.3
SYNE1-209ENST00000367257 VPS13AQ96RL7 3174 aa6.92□□□□□ -1.3
SYNE1-209ENST00000367257 A0A0J9YXY3 114 aa6.92□□□□□ -1.3
SYNE1-209ENST00000367257 C11orf53Q8IXP5 236 aa6.92□□□□□ -1.3
SYNE1-209ENST00000367257 GPHB5Q86YW7 130 aa6.92□□□□□ -1.3
SYNE1-209ENST00000367257 ZFHX4Q86UP3 3567 aa6.92□□□□□ -1.3
SYNE1-209ENST00000367257 NOTCH2Q04721 2471 aa6.92□□□□□ -1.3
SYNE1-209ENST00000367257 K7EIM0 57 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 NDUFA1O15239 70 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 BUB3O43684 328 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 NXPH4O95158 308 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 NDUFA11Q86Y39 141 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 FAM215AQ9Y5M1 114 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 PLCE1Q9P212 2302 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 TPSG1Q9NRR2 321 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 GPR179Q6PRD1 2367 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 LRRK1Q38SD2 2015 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 ZNF407Q9C0G0 2248 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 IGHV3-16A0A0C4DH30 117 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 RNF223E7ERA6 249 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 TIMM17BO60830 172 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 SPART-AS1P0CW21 52 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 WFDC9Q8NEX5 89 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 MDFICQ9P1T7 246 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 TEX49A0A1B0GTD5 131 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 NREPQ16612 68 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 DEFB121Q5J5C9 76 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 TP73-AS1Q9UF72 201 aa6.91□□□□□ -1.3
SYNE1-209ENST00000367257 MYO18BQ8IUG5 2567 aa6.9□□□□□ -1.3
SYNE1-209ENST00000367257 CFAP126Q5VTH2 177 aa6.9□□□□□ -1.3
SYNE1-209ENST00000367257 LINC00526Q96FQ7 95 aa6.9□□□□□ -1.3
SYNE1-209ENST00000367257 PIP4P1Q86T03 277 aa6.9□□□□□ -1.3
SYNE1-209ENST00000367257 FAM167A-AS1Q96KT0 104 aa6.9□□□□□ -1.3
SYNE1-209ENST00000367257 INSL3P51460 131 aa6.9□□□□□ -1.31
SYNE1-209ENST00000367257 LGALS9O00182 355 aa6.9□□□□□ -1.31
SYNE1-209ENST00000367257 IGKV1-17P01599 117 aa6.9□□□□□ -1.31
SYNE1-209ENST00000367257 YLPM1P49750 1951 aaKnown RBP6.89□□□□□ -1.31
SYNE1-209ENST00000367257 PKDREJQ9NTG1 2253 aa6.89□□□□□ -1.31
SYNE1-209ENST00000367257 UBE2BP63146 152 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms