RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 PAXXQ9BUH6 204 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 ARV1Q9H2C2 271 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 DAZ3Q9NR90 486 aaKnown RBP5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 CACFD1Q9UGQ2 172 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 SHPKQ9UHJ6 478 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 FLVCR2Q9UPI3 526 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 IGHV1OR15-1A0A075B7D0 117 aa5.43□□□□□ -1.54
HMGB1P39-201ENST00000366304 DUXBA0A1W2PPF3 345 aa5.43□□□□□ -1.54
HMGB1P39-201ENST00000366304 B4DEV8 164 aa5.43□□□□□ -1.54
HMGB1P39-201ENST00000366304 C9JCJ5 164 aa5.43□□□□□ -1.54
HMGB1P39-201ENST00000366304 H0Y8G0 127 aa5.43□□□□□ -1.54
HMGB1P39-201ENST00000366304 STAG3L3P0CL85 134 aa5.43□□□□□ -1.54
HMGB1P39-201ENST00000366304 CRISP2P16562 243 aa5.43□□□□□ -1.54
HMGB1P39-201ENST00000366304 WDR73Q6P4I2 378 aa5.43□□□□□ -1.54
HMGB1P39-201ENST00000366304 NHLRC2Q8NBF2 726 aa5.43□□□□□ -1.54
HMGB1P39-201ENST00000366304 TMEM37Q8WXS4 190 aa5.43□□□□□ -1.54
HMGB1P39-201ENST00000366304 RASL10AQ92737 203 aa5.43□□□□□ -1.54
HMGB1P39-201ENST00000366304 LINC00477Q96M19 166 aa5.43□□□□□ -1.54
HMGB1P39-201ENST00000366304 SNHG12Q9BXW3 62 aa5.43□□□□□ -1.54
HMGB1P39-201ENST00000366304 TRAV8-6A0A0B4J262 113 aa5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 K7ERU9 68 aa5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 NBEAP1P0C6P0 100 aa5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 GATA1P15976 413 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 RPS10P46783 165 aaKnown RBP5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 RPL19P84098 196 aaKnown RBP5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 SLC38A11Q08AI6 406 aa5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 TDRG1Q3Y452 100 aa5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 COA6Q5JTJ3 125 aaKnown RBP5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 SPANXN5Q5MJ07 72 aa5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 LINC00305Q7Z4B0 112 aa5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 ZNF664Q8N3J9 261 aa5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 Q8N976 141 aa5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 PACRGQ96M98 296 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 LINC01600Q96MT4 127 aa5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 PRO1933Q9H354 126 aa5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 PXMP4Q9Y6I8 212 aa5.42□□□□□ -1.54
HMGB1P39-201ENST00000366304 IGKV2-40A0A087WW87 121 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 K7EPK0 472 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 NDUFB4O95168 129 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 IGKV2D-40P01614 121 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 GPX1P07203 203 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 NPSP0C0P6 89 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 S100A7P31151 101 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 PTTG1IPP53801 180 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 KRTAP10-8P60410 259 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 UBE2G2P60604 165 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 UBE2V1Q13404 147 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 KHDC3LQ587J8 217 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 MUC21Q5SSG8 566 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 BPIFA4PQ86YQ2 179 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 TMEM183AQ8IXX5 376 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 LYPD6BQ8NI32 183 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 TMEM18Q96B42 140 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 BTF3L4Q96K17 158 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 TMEM242Q9NWH2 141 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 OR5AC2Q9NZP5 309 aa5.41□□□□□ -1.54
HMGB1P39-201ENST00000366304 TRAV8-3A0A0A6YYJ7 113 aa5.4□□□□□ -1.54
HMGB1P39-201ENST00000366304 TRAV4A0A0B4J268 109 aa5.4□□□□□ -1.54
HMGB1P39-201ENST00000366304 XKRY2A2RUG3 117 aa5.4□□□□□ -1.54
HMGB1P39-201ENST00000366304 CCSO14618 274 aa5.4□□□□□ -1.54
HMGB1P39-201ENST00000366304 SYNGR2O43760 224 aa5.4□□□□□ -1.54
HMGB1P39-201ENST00000366304 GZMBP10144 247 aa5.4□□□□□ -1.54
HMGB1P39-201ENST00000366304 SLC25A6P12236 298 aa5.4□□□□□ -1.54
HMGB1P39-201ENST00000366304 SULT1A1P50225 295 aa5.4□□□□□ -1.54
HMGB1P39-201ENST00000366304 LINC01551Q86U37 167 aa5.4□□□□□ -1.54
HMGB1P39-201ENST00000366304 SLC25A29Q8N8R3 303 aa5.4□□□□□ -1.54
HMGB1P39-201ENST00000366304 MITD1Q8WV92 249 aa5.4□□□□□ -1.54
HMGB1P39-201ENST00000366304 VPS25Q9BRG1 176 aa5.4□□□□□ -1.54
HMGB1P39-201ENST00000366304 MIEN1Q9BRT3 115 aa5.4□□□□□ -1.54
HMGB1P39-201ENST00000366304 A0A1B0GV72 72 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 IFITM10A6NMD0 228 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 M0R036 132 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 GOSR2O14653 212 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 FABP4P15090 132 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 CDC34P49427 236 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 SULT1A2P50226 295 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 ARL16Q0P5N6 197 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 TMEM183BQ1AE95 376 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 ZNF674Q2M3X9 581 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 SH2D6Q7Z4S9 175 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 EXOC3-AS1Q8N2X6 119 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 OR4C5Q8NGB2 326 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 ATP6V0E2Q8NHE4 81 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 Q8TAT8 98 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 YPEL4Q96NS1 127 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 IMMP2LQ96T52 175 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 Q9UF83 564 aa5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 STRAPQ9Y3F4 350 aaKnown RBP5.39□□□□□ -1.55
HMGB1P39-201ENST00000366304 TRBV19A0A075B6N1 114 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 TGIF2-C20orf24A0A0A6YYL0 155 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 C5orf51A6NDU8 294 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 AGPAT2O15120 278 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 HIST1H2BKO60814 126 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 ZNF253O75346 499 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 HIST1H2BJP06899 126 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 PFN1P07737 140 aaKnown RBP5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 PET100P0DJ07 73 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 HIST1H2BOP23527 126 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 HIST1H2BBP33778 126 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 H2BFSP57053 126 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms