RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 DIRC1Q969H9 104 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 MSANTD3Q96H12 275 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 AMELXQ99217 191 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 CMSS1Q9BQ75 279 aaKnown RBP-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 DRC3Q9H069 523 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 TAF9BQ9HBM6 251 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 SBF2Q86WG5 1849 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 ABCC11Q96J66 1382 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 LOC400499M0QZD8 3231 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 FRYLO94915 3013 aa-1.91□□□□□ -2.71
RNU6-54P-201ENST00000365563 WRNQ14191 1432 aaPredicted RBP eCLIP-1.91□□□□□ -2.71
RNU6-54P-201ENST00000365563 TRBV19A0A075B6N1 114 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 hADV38S2A0JD32 116 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 K7ERJ3 54 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 APOEP02649 317 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 MT-ND6P03923 174 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 NFYBP25208 207 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 ARF6P62330 175 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 POU6F1Q14863 301 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 ALX1Q15699 326 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 OR2T2Q6IF00 324 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 BAGE3Q86Y29 109 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 BORCS7Q96B45 105 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 DCUN1D5Q9BTE7 237 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 FRMPD1Q5SYB0 1578 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 KDM5AP29375 1690 aaKnown RBP-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 KIF27Q86VH2 1401 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 EVC2Q86UK5 1308 aa-1.91□□□□□ -2.72
RNU6-54P-201ENST00000365563 UBR2Q8IWV8 1755 aa-1.92□□□□□ -2.72
RNU6-54P-201ENST00000365563 CXorf51AA0A1B0GTR3 108 aa-1.92□□□□□ -2.72
RNU6-54P-201ENST00000365563 A0A1B0GW64 132 aa-1.92□□□□□ -2.72
RNU6-54P-201ENST00000365563 TMEM213A2RRL7 107 aa-1.92□□□□□ -2.72
RNU6-54P-201ENST00000365563 IFNA7P01567 189 aa-1.92□□□□□ -2.72
RNU6-54P-201ENST00000365563 SERPINA6P08185 405 aa-1.92□□□□□ -2.72
RNU6-54P-201ENST00000365563 CXCL1P09341 107 aa-1.92□□□□□ -2.72
RNU6-54P-201ENST00000365563 C8orf88P0DMB2 117 aa-1.92□□□□□ -2.72
RNU6-54P-201ENST00000365563 TPT1P13693 172 aaKnown RBP-1.92□□□□□ -2.72
RNU6-54P-201ENST00000365563 SPCS3P61009 180 aa-1.92□□□□□ -2.72
RNU6-54P-201ENST00000365563 OR8J2Q8NGG1 315 aa-1.92□□□□□ -2.72
RNU6-54P-201ENST00000365563 CLEC2BQ92478 149 aa-1.92□□□□□ -2.72
RNU6-54P-201ENST00000365563 SIGMAR1Q99720 223 aa-1.92□□□□□ -2.72
RNU6-54P-201ENST00000365563 BCORQ6W2J9 1755 aa-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 PCF11O94913 1555 aaKnown RBP-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 ARHGEF5Q12774 1597 aa-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 NCAPD3P42695 1498 aa-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 RTL9Q8NET4 1388 aa-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 TRAV4A0A0B4J268 109 aa-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 CPSF4LA6NMK7 179 aaKnown RBP-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 H0YIV9 168 aa-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 RD3LP0DJH9 198 aa-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 RPL35P42766 123 aaKnown RBP-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 TCL1AP56279 114 aa-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 EDDM3BP56851 147 aa-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 UQCC1Q9NVA1 299 aa-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 S4R3F8 94 aa-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 DNAH14Q0VDD8 3507 aa-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 ZNF142P52746 1687 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-54P-201ENST00000365563 WDR97A6NE52 1622 aa-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 FAM236DA0A1B0GTK5 79 aa-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 FAM92AA1XBS5 289 aa-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 DCTN3O75935 186 aa-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 CNIH1O95406 144 aa-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 IFNA14P01570 189 aa-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 FAM236CP0DP71 79 aa-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 RPS12P25398 132 aaKnown RBP-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 CARD18P57730 90 aa-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 HBBP68871 147 aa-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 PHF5AQ7RTV0 110 aaKnown RBP-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 OTUD6BQ8N6M0 293 aa-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 ARL6IP6Q8N6S5 226 aa-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 USMG5Q96IX5 58 aa-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 USP54Q70EL1 1684 aa-1.94□□□□□ -2.72
RNU6-54P-201ENST00000365563 CSTAP01040 98 aa-1.95□□□□□ -2.72
RNU6-54P-201ENST00000365563 TNNC2P02585 160 aa-1.95□□□□□ -2.72
RNU6-54P-201ENST00000365563 ADCYAP1P18509 176 aa-1.95□□□□□ -2.72
RNU6-54P-201ENST00000365563 ERP29P30040 261 aaKnown RBP-1.95□□□□□ -2.72
RNU6-54P-201ENST00000365563 ASIPP42127 132 aa-1.95□□□□□ -2.72
RNU6-54P-201ENST00000365563 OGFRL1Q5TC84 451 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-54P-201ENST00000365563 NEK7Q8TDX7 302 aa-1.95□□□□□ -2.72
RNU6-54P-201ENST00000365563 SMIM4Q8WVI0 70 aa-1.95□□□□□ -2.72
RNU6-54P-201ENST00000365563 IFI27L1Q96BM0 104 aa-1.95□□□□□ -2.72
RNU6-54P-201ENST00000365563 NAA60Q9H7X0 242 aa-1.95□□□□□ -2.72
RNU6-54P-201ENST00000365563 PARVBQ9HBI1 364 aa-1.95□□□□□ -2.72
RNU6-54P-201ENST00000365563 CEP250Q9BV73 2442 aa-1.95□□□□□ -2.72
RNU6-54P-201ENST00000365563 VCANP13611 3396 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 PCNTO95613 3336 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 PTPRGP23470 1445 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 TRAV2A0A0B4J234 112 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 SSSCA1O60232 199 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 APOA1P02647 267 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 TFF1P04155 84 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 MLLT11Q13015 90 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 MSMO1Q15800 293 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 TMEM91Q6ZNR0 172 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 C8orf76Q96K31 380 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 CARD19Q96LW7 228 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 LRTM1Q9HBL6 345 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 FGFR1OP2Q9NVK5 253 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 ERG28Q9UKR5 140 aa-1.96□□□□□ -2.72
RNU6-54P-201ENST00000365563 ARFGEF1Q9Y6D6 1849 aa-1.96□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms