RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 MBP02144 154 aa13.71□□□□□ -0.21
CD47-202ENST00000361309 ARMS2P0C7Q2 107 aa13.71□□□□□ -0.21
CD47-202ENST00000361309 KCNIP4Q6PIL6 250 aa13.71□□□□□ -0.21
CD47-202ENST00000361309 OR11H4Q8NGC9 324 aa13.71□□□□□ -0.21
CD47-202ENST00000361309 ACTR3CQ9C0K3 210 aaPredicted RBP13.71□□□□□ -0.21
CD47-202ENST00000361309 A0A1W2PRE2 83 aa13.7□□□□□ -0.22
CD47-202ENST00000361309 KRBOX1C9JBD0 128 aa13.7□□□□□ -0.22
CD47-202ENST00000361309 M0R036 132 aa13.7□□□□□ -0.22
CD47-202ENST00000361309 SERF2P84101 59 aa13.7□□□□□ -0.22
CD47-202ENST00000361309 DNLZQ5SXM8 178 aa13.7□□□□□ -0.22
CD47-202ENST00000361309 GRIFINA4D1Z8 144 aa13.69□□□□□ -0.22
CD47-202ENST00000361309 IFNA7P01567 189 aa13.69□□□□□ -0.22
CD47-202ENST00000361309 CRIP1P50238 77 aa13.69□□□□□ -0.22
CD47-202ENST00000361309 RPL37AP61513 92 aaKnown RBP13.69□□□□□ -0.22
CD47-202ENST00000361309 Q0VG73 95 aa13.69□□□□□ -0.22
CD47-202ENST00000361309 C14orf177Q52M58 125 aa13.69□□□□□ -0.22
CD47-202ENST00000361309 Q86TA4 180 aa13.69□□□□□ -0.22
CD47-202ENST00000361309 SFRP2Q96HF1 295 aa13.69□□□□□ -0.22
CD47-202ENST00000361309 C1orf43Q9BWL3 253 aa13.68□□□□□ -0.22
CD47-202ENST00000361309 PEX7O00628 323 aa13.67□□□□□ -0.22
CD47-202ENST00000361309 RPL36AP83881 106 aaKnown RBP13.67□□□□□ -0.22
CD47-202ENST00000361309 RPL36ALQ969Q0 106 aaKnown RBP13.67□□□□□ -0.22
CD47-202ENST00000361309 ZC2HC1AQ96GY0 325 aa13.67□□□□□ -0.22
CD47-202ENST00000361309 TNFSF18Q9UNG2 199 aa13.67□□□□□ -0.22
CD47-202ENST00000361309 PHLDA3Q9Y5J5 127 aa13.67□□□□□ -0.22
CD47-202ENST00000361309 TRBV10-1A0A0K0K1A3 114 aa13.66□□□□□ -0.22
CD47-202ENST00000361309 TMEM262E9PQX1 116 aa13.66□□□□□ -0.22
CD47-202ENST00000361309 M0R381 172 aa13.66□□□□□ -0.22
CD47-202ENST00000361309 SH2D1AO60880 128 aa13.66□□□□□ -0.22
CD47-202ENST00000361309 HNRNPA3P51991 378 aaKnown RBP13.66□□□□□ -0.22
CD47-202ENST00000361309 UBE2G2P60604 165 aa13.66□□□□□ -0.22
CD47-202ENST00000361309 UBE2D3P61077 147 aa13.66□□□□□ -0.22
CD47-202ENST00000361309 UBE2D2P62837 147 aa13.66□□□□□ -0.22
CD47-202ENST00000361309 ENHOQ6UWT2 76 aa13.66□□□□□ -0.22
CD47-202ENST00000361309 TRBV7-3A0A075B6L6 115 aa13.65□□□□□ -0.22
CD47-202ENST00000361309 TPT1P13693 172 aaKnown RBP13.65□□□□□ -0.22
CD47-202ENST00000361309 DAZAP1Q96EP5 407 aaKnown RBP13.65□□□□□ -0.22
CD47-202ENST00000361309 AQP10Q96PS8 301 aa13.65□□□□□ -0.22
CD47-202ENST00000361309 C15orf54Q8N8G6 183 aa13.64□□□□□ -0.23
CD47-202ENST00000361309 TMSB15BA0A087X1C1 80 aa13.63□□□□□ -0.23
CD47-202ENST00000361309 USP17L23D6RBM5 183 aa13.63□□□□□ -0.23
CD47-202ENST00000361309 CRPP02741 224 aa13.63□□□□□ -0.23
CD47-202ENST00000361309 DEFA1P59665 94 aa13.63□□□□□ -0.23
CD47-202ENST00000361309 DEFA3P59666 94 aa13.63□□□□□ -0.23
CD47-202ENST00000361309 ZNF726P1Q15940 193 aa13.63□□□□□ -0.23
CD47-202ENST00000361309 FAM162BQ5T6X4 162 aa13.63□□□□□ -0.23
CD47-202ENST00000361309 TRBV6-8A0A0A6YYG3 113 aa13.62□□□□□ -0.23
CD47-202ENST00000361309 HLA-DQA1P01909 254 aa13.62□□□□□ -0.23
CD47-202ENST00000361309 MPV17L2Q567V2 206 aa13.62□□□□□ -0.23
CD47-202ENST00000361309 COX8CQ7Z4L0 72 aa13.62□□□□□ -0.23
CD47-202ENST00000361309 ZFP82Q8N141 532 aa13.62□□□□□ -0.23
CD47-202ENST00000361309 HIST1H2BAQ96A08 127 aa13.62□□□□□ -0.23
CD47-202ENST00000361309 ZFP30Q9Y2G7 519 aa13.62□□□□□ -0.23
CD47-202ENST00000361309 FAM74A7A6NL05 159 aa13.61□□□□□ -0.23
CD47-202ENST00000361309 ANGP03950 147 aaKnown RBP13.61□□□□□ -0.23
CD47-202ENST00000361309 OR10G8Q8NGN5 311 aa13.61□□□□□ -0.23
CD47-202ENST00000361309 CTXND1A0A1B0GTU2 59 aa13.6□□□□□ -0.23
CD47-202ENST00000361309 PRSS1P07477 247 aa13.6□□□□□ -0.23
CD47-202ENST00000361309 ZNF674Q2M3X9 581 aa13.6□□□□□ -0.23
CD47-202ENST00000361309 LINC01559Q495D7 138 aa13.6□□□□□ -0.23
CD47-202ENST00000361309 NKX6-2Q9C056 277 aaPredicted RBP13.6□□□□□ -0.23
CD47-202ENST00000361309 ALG5Q9Y673 324 aa13.6□□□□□ -0.23
CD47-202ENST00000361309 RPL7L1Q6DKI1 246 aaKnown RBP13.59□□□□□ -0.23
CD47-202ENST00000361309 RAB4BP61018 213 aa13.58□□□□□ -0.24
CD47-202ENST00000361309 UBE2G1P62253 170 aa13.58□□□□□ -0.24
CD47-202ENST00000361309 DGAT2L7PQ6IED9 249 aa13.58□□□□□ -0.24
CD47-202ENST00000361309 C9orf163Q8N9P6 203 aa13.58□□□□□ -0.24
CD47-202ENST00000361309 NEXN-AS1Q8NBZ9 246 aa13.58□□□□□ -0.24
CD47-202ENST00000361309 FMC1Q96HJ9 113 aa13.58□□□□□ -0.24
CD47-202ENST00000361309 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.58□□□□□ -0.24
CD47-202ENST00000361309 PTTG1O95997 202 aa13.57□□□□□ -0.24
CD47-202ENST00000361309 ZNF56Q15929 161 aa13.57□□□□□ -0.24
CD47-202ENST00000361309 Q5BKY6 102 aa13.57□□□□□ -0.24
CD47-202ENST00000361309 CHCHD5Q9BSY4 110 aa13.57□□□□□ -0.24
CD47-202ENST00000361309 PANO1I0J062 215 aa13.56□□□□□ -0.24
CD47-202ENST00000361309 MIAQ16674 131 aa13.56□□□□□ -0.24
CD47-202ENST00000361309 MT1HL1P0DM35 61 aa13.55□□□□□ -0.24
CD47-202ENST00000361309 PRR27Q6MZM9 219 aa13.55□□□□□ -0.24
CD47-202ENST00000361309 BORCS7-ASMTA0A0B4J1R7 106 aa13.54□□□□□ -0.24
CD47-202ENST00000361309 LTAP01374 205 aa13.54□□□□□ -0.24
CD47-202ENST00000361309 PKIAP61925 76 aa13.54□□□□□ -0.24
CD47-202ENST00000361309 CLPSL2Q6UWE3 100 aa13.54□□□□□ -0.24
CD47-202ENST00000361309 TRBV6-1A0A0K0K1D8 114 aa13.53□□□□□ -0.24
CD47-202ENST00000361309 AKR1C8PQ5T2L2 129 aa13.53□□□□□ -0.24
CD47-202ENST00000361309 SDIM1Q6ZPB5 146 aa13.53□□□□□ -0.24
CD47-202ENST00000361309 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.53□□□□□ -0.24
CD47-202ENST00000361309 INO80EQ8NBZ0 244 aaPredicted RBP13.53□□□□□ -0.24
CD47-202ENST00000361309 OR10AG1Q8NH19 301 aa13.53□□□□□ -0.24
CD47-202ENST00000361309 RPL19P84098 196 aaKnown RBP13.52□□□□□ -0.25
CD47-202ENST00000361309 KRTAP26-1Q6PEX3 210 aa13.52□□□□□ -0.25
CD47-202ENST00000361309 NTM-AS1Q6ZSK4 140 aa13.52□□□□□ -0.25
CD47-202ENST00000361309 MED28Q9H204 178 aa13.52□□□□□ -0.25
CD47-202ENST00000361309 PRR34Q9NV39 138 aa13.52□□□□□ -0.25
CD47-202ENST00000361309 LINC00269Q8N2A0 174 aa13.51□□□□□ -0.25
CD47-202ENST00000361309 MAP1LC3B2A6NCE7 125 aa13.5□□□□□ -0.25
CD47-202ENST00000361309 A6NHS1 94 aa13.5□□□□□ -0.25
CD47-202ENST00000361309 AKR1C3P42330 323 aa13.5□□□□□ -0.25
CD47-202ENST00000361309 RBX1P62877 108 aa13.5□□□□□ -0.25
CD47-202ENST00000361309 GAGE6Q13070 117 aa13.5□□□□□ -0.25
CD47-202ENST00000361309 CST9LP1Q5W188 147 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms