RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 GTF2H5Q6ZYL4 71 aa9.85□□□□□ -0.83
SQSTM1-201ENST00000360718 WFDC3Q8IUB2 231 aa9.85□□□□□ -0.83
SQSTM1-201ENST00000360718 OR2K2Q8NGT1 345 aa9.85□□□□□ -0.83
SQSTM1-201ENST00000360718 DKK2Q9UBU2 259 aa9.85□□□□□ -0.83
SQSTM1-201ENST00000360718 LENEPQ9Y5L5 61 aa9.85□□□□□ -0.83
SQSTM1-201ENST00000360718 TRAV8-6A0A0B4J262 113 aa9.85□□□□□ -0.83
SQSTM1-201ENST00000360718 GAGE12BA1L429 117 aa9.85□□□□□ -0.83
SQSTM1-201ENST00000360718 GAGE10A6NGK3 116 aa9.85□□□□□ -0.83
SQSTM1-201ENST00000360718 OVOL1O14753 267 aa9.85□□□□□ -0.83
SQSTM1-201ENST00000360718 ZMAT4Q9H898 229 aa9.85□□□□□ -0.83
SQSTM1-201ENST00000360718 FBN1P35555 2871 aaKnown RBP9.84□□□□□ -0.83
SQSTM1-201ENST00000360718 IGHV4-4A0A075B6R2 117 aa9.84□□□□□ -0.83
SQSTM1-201ENST00000360718 C9orf118A6NHY6 69 aa9.84□□□□□ -0.83
SQSTM1-201ENST00000360718 EVI2AP22794 236 aa9.84□□□□□ -0.83
SQSTM1-201ENST00000360718 SNRPD3P62318 126 aaKnown RBP9.84□□□□□ -0.83
SQSTM1-201ENST00000360718 ODF1Q14990 250 aa9.84□□□□□ -0.83
SQSTM1-201ENST00000360718 SPANXN1Q5VSR9 72 aa9.84□□□□□ -0.83
SQSTM1-201ENST00000360718 OR10J6PQ8NGY7 276 aa9.84□□□□□ -0.83
SQSTM1-201ENST00000360718 DCANP1Q8TF63 244 aa9.84□□□□□ -0.83
SQSTM1-201ENST00000360718 TMEM158Q8WZ71 300 aa9.84□□□□□ -0.83
SQSTM1-201ENST00000360718 VWFP04275 2813 aa9.83□□□□□ -0.84
SQSTM1-201ENST00000360718 IGKCP01834 107 aa9.83□□□□□ -0.84
SQSTM1-201ENST00000360718 C20orf173Q96LM9 149 aa9.83□□□□□ -0.84
SQSTM1-201ENST00000360718 DPM2O94777 84 aa9.82□□□□□ -0.84
SQSTM1-201ENST00000360718 LAGE3Q14657 143 aa9.82□□□□□ -0.84
SQSTM1-201ENST00000360718 C11orf21Q9P2W6 132 aa9.82□□□□□ -0.84
SQSTM1-201ENST00000360718 SORL1Q92673 2214 aa9.82□□□□□ -0.84
SQSTM1-201ENST00000360718 GAS8-AS1O95177 125 aa9.82□□□□□ -0.84
SQSTM1-201ENST00000360718 KIR3DS1Q14943 382 aa9.82□□□□□ -0.84
SQSTM1-201ENST00000360718 PCP2Q8IVA1 136 aa9.82□□□□□ -0.84
SQSTM1-201ENST00000360718 LINC00477Q96M19 166 aa9.82□□□□□ -0.84
SQSTM1-201ENST00000360718 HIGD1BQ9P298 99 aa9.82□□□□□ -0.84
SQSTM1-201ENST00000360718 IGLV2-18A0A075B6J9 118 aa9.81□□□□□ -0.84
SQSTM1-201ENST00000360718 K7EQG2 157 aa9.81□□□□□ -0.84
SQSTM1-201ENST00000360718 SMIM17P0DL12 118 aa9.81□□□□□ -0.84
SQSTM1-201ENST00000360718 GATA1P15976 413 aaPredicted RBP9.81□□□□□ -0.84
SQSTM1-201ENST00000360718 TCTAP57738 103 aa9.81□□□□□ -0.84
SQSTM1-201ENST00000360718 MRAP2Q96G30 205 aa9.81□□□□□ -0.84
SQSTM1-201ENST00000360718 HHLA3Q9XRX5 114 aa9.81□□□□□ -0.84
SQSTM1-201ENST00000360718 CHTOPQ9Y3Y2 248 aaKnown RBP9.81□□□□□ -0.84
SQSTM1-201ENST00000360718 CSTL1Q9H114 145 aa9.81□□□□□ -0.84
SQSTM1-201ENST00000360718 PF4P02776 101 aa9.8□□□□□ -0.84
SQSTM1-201ENST00000360718 ZNF688P0C7X2 276 aa9.8□□□□□ -0.84
SQSTM1-201ENST00000360718 DEFB114Q30KQ6 69 aa9.8□□□□□ -0.84
SQSTM1-201ENST00000360718 PRIMA1Q86XR5 153 aa9.8□□□□□ -0.84
SQSTM1-201ENST00000360718 TRAV2A0A0B4J234 112 aa9.8□□□□□ -0.84
SQSTM1-201ENST00000360718 HLA-DRB4P13762 266 aa9.8□□□□□ -0.84
SQSTM1-201ENST00000360718 DEFB1P60022 68 aa9.8□□□□□ -0.84
SQSTM1-201ENST00000360718 KRTAP24-1Q3LI83 254 aa9.8□□□□□ -0.84
SQSTM1-201ENST00000360718 TMEM61Q8N0U2 210 aa9.8□□□□□ -0.84
SQSTM1-201ENST00000360718 NRACQ8N912 160 aa9.8□□□□□ -0.84
SQSTM1-201ENST00000360718 HLA-DRB4X5D2U9 266 aa9.8□□□□□ -0.84
SQSTM1-201ENST00000360718 TRAV25A0A0B4J276 109 aa9.79□□□□□ -0.84
SQSTM1-201ENST00000360718 H3BUT2 72 aa9.79□□□□□ -0.84
SQSTM1-201ENST00000360718 SMIM13P0DJ93 91 aa9.79□□□□□ -0.84
SQSTM1-201ENST00000360718 TRAV21A0A0B4J279 112 aa9.79□□□□□ -0.84
SQSTM1-201ENST00000360718 UFSP1Q6NVU6 142 aa9.79□□□□□ -0.84
SQSTM1-201ENST00000360718 K7EP34 96 aa9.78□□□□□ -0.84
SQSTM1-201ENST00000360718 CD300EQ496F6 205 aaPredicted RBP9.78□□□□□ -0.84
SQSTM1-201ENST00000360718 AGRNO00468 2067 aa9.78□□□□□ -0.84
SQSTM1-201ENST00000360718 SAP30O75446 220 aa9.77□□□□□ -0.84
SQSTM1-201ENST00000360718 ZC2HC1BQ5TFG8 222 aa9.77□□□□□ -0.84
SQSTM1-201ENST00000360718 SPAG8Q99932 426 aaPredicted RBP9.77□□□□□ -0.84
SQSTM1-201ENST00000360718 A0A087WX48 190 aa9.77□□□□□ -0.85
SQSTM1-201ENST00000360718 F6UB75 175 aa9.77□□□□□ -0.85
SQSTM1-201ENST00000360718 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.77□□□□□ -0.85
SQSTM1-201ENST00000360718 H3BVH4 76 aa9.77□□□□□ -0.85
SQSTM1-201ENST00000360718 K7EMI3 77 aa9.77□□□□□ -0.85
SQSTM1-201ENST00000360718 S100A4P26447 101 aaKnown RBP9.77□□□□□ -0.85
SQSTM1-201ENST00000360718 ORMDL2Q53FV1 153 aa9.77□□□□□ -0.85
SQSTM1-201ENST00000360718 GTSCR1Q86UQ5 136 aa9.77□□□□□ -0.85
SQSTM1-201ENST00000360718 OR5A1Q8NGJ0 315 aa9.77□□□□□ -0.85
SQSTM1-201ENST00000360718 CITED1Q99966 193 aa9.77□□□□□ -0.85
SQSTM1-201ENST00000360718 IGKV2D-26A0A0A0MRZ7 120 aa9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 GCSHP23434 173 aa9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 PLNP26678 52 aa9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 SPATA3Q8NHX4 192 aa9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 RAB37Q96AX2 223 aa9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 CHAC1Q9BUX1 264 aa9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 SMIM2Q9BVW6 85 aa9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 TRAV26-2A0A0B4J265 109 aa9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 A0A1W2PPM0 123 aa9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 MED14OSP0DP75 135 aa9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 FABP2P12104 132 aa9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 ASIPP42127 132 aa9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 C20orf78Q9BR46 151 aa9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 MRPL35Q9NZE8 188 aaKnown RBP9.76□□□□□ -0.85
SQSTM1-201ENST00000360718 TRAV12-1A0A0B4J245 112 aa9.75□□□□□ -0.85
SQSTM1-201ENST00000360718 TRBV7-9A0A0J9YWB2 115 aa9.75□□□□□ -0.85
SQSTM1-201ENST00000360718 DUSP14O95147 198 aaKnown RBP9.75□□□□□ -0.85
SQSTM1-201ENST00000360718 PPP1R17O96001 155 aa9.75□□□□□ -0.85
SQSTM1-201ENST00000360718 DPH3P1Q9H4G8 78 aa9.75□□□□□ -0.85
SQSTM1-201ENST00000360718 STAB1Q9NY15 2570 aa9.75□□□□□ -0.85
SQSTM1-201ENST00000360718 TRBV25-1A0A075B6N4 114 aa9.75□□□□□ -0.85
SQSTM1-201ENST00000360718 H7C1H1 209 aa9.75□□□□□ -0.85
SQSTM1-201ENST00000360718 TAL2Q16559 108 aa9.75□□□□□ -0.85
SQSTM1-201ENST00000360718 FOXI2Q6ZQN5 318 aa9.75□□□□□ -0.85
SQSTM1-201ENST00000360718 ZFAND2AQ8N6M9 145 aa9.75□□□□□ -0.85
SQSTM1-201ENST00000360718 PHLDA3Q9Y5J5 127 aa9.75□□□□□ -0.85
SQSTM1-201ENST00000360718 SPCS1Q9Y6A9 102 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms