RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 IGKV2D-26A0A0A0MRZ7 120 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 IGKCP01834 107 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 RNASE3P12724 160 aaKnown RBP5.43□□□□□ -1.54
CLCN3-202ENST00000360642 PSMB8P28062 276 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 DSCR9P59020 149 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 HSD52Q0P140 79 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 SCGB2A2Q13296 93 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 MAPKAPK5-AS1Q8N8E1 139 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 DEFB104AQ8WTQ1 72 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 PEF1Q9UBV8 284 aaKnown RBP5.43□□□□□ -1.54
CLCN3-202ENST00000360642 FBN2P35556 2912 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 C7orf71A4D174 169 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 KLLNB2CW77 178 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 RNASE4P34096 147 aaKnown RBP5.43□□□□□ -1.54
CLCN3-202ENST00000360642 ASIPP42127 132 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 NMUP48645 174 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 POM121L12Q8N7R1 296 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 DCANP1Q8TF63 244 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 RASL10AQ92737 203 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 FOXC2Q99958 501 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 SMIM2Q9BVW6 85 aa5.43□□□□□ -1.54
CLCN3-202ENST00000360642 TRAV8-6A0A0B4J262 113 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 NXPH4O95158 308 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 AMMECR1LQ6DCA0 310 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 MAPK1IP1LQ8NDC0 245 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 MYOZ3Q8TDC0 251 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 C20orf78Q9BR46 151 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 DPH3P1Q9H4G8 78 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 HIGD1BQ9P298 99 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 A0A096LNT2 108 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 IGLV5-39A0A0G2JS06 123 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 H3BRM9 83 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 M0R381 172 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 GNRH2O43555 120 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 DPM2O94777 84 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 HLA-DRB4P13762 266 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 FHL2Q14192 279 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 OR4C5Q8NGB2 326 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 PHLDA3Q9Y5J5 127 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 HLA-DRB4X5D2U9 266 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 A0A087WX48 190 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 K7EMI3 77 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 XP32Q5T750 250 aa5.42□□□□□ -1.54
CLCN3-202ENST00000360642 C14orf178Q8N769 122 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-202ENST00000360642 S100A4P26447 101 aaKnown RBP5.41□□□□□ -1.54
CLCN3-202ENST00000360642 TOMM6Q96B49 74 aa5.41□□□□□ -1.54
CLCN3-202ENST00000360642 MRPL35Q9NZE8 188 aaKnown RBP5.41□□□□□ -1.54
CLCN3-202ENST00000360642 KIF25-AS1Q9Y6Z4 181 aa5.41□□□□□ -1.54
CLCN3-202ENST00000360642 TRAV12-1A0A0B4J245 112 aa5.41□□□□□ -1.54
CLCN3-202ENST00000360642 A6NDN8 102 aa5.41□□□□□ -1.54
CLCN3-202ENST00000360642 IGHV4-59P01825 116 aa5.41□□□□□ -1.54
CLCN3-202ENST00000360642 SLC25A16P16260 332 aa5.41□□□□□ -1.54
CLCN3-202ENST00000360642 LINC00315P59091 139 aa5.41□□□□□ -1.54
CLCN3-202ENST00000360642 KRTAP10-2P60368 255 aa5.41□□□□□ -1.54
CLCN3-202ENST00000360642 DEFB112Q30KQ8 113 aa5.41□□□□□ -1.54
CLCN3-202ENST00000360642 ORMDL2Q53FV1 153 aa5.41□□□□□ -1.54
CLCN3-202ENST00000360642 ZC2HC1BQ5TFG8 222 aa5.41□□□□□ -1.54
CLCN3-202ENST00000360642 SAMD13Q5VXD3 122 aa5.41□□□□□ -1.54
CLCN3-202ENST00000360642 RPL39LQ96EH5 51 aaKnown RBP5.41□□□□□ -1.54
CLCN3-202ENST00000360642 GTSCR1Q86UQ5 136 aa5.4□□□□□ -1.54
CLCN3-202ENST00000360642 DOPEY1Q5JWR5 2465 aa5.4□□□□□ -1.54
CLCN3-202ENST00000360642 ABCA12Q86UK0 2595 aa5.4□□□□□ -1.54
CLCN3-202ENST00000360642 SORL1Q92673 2214 aa5.4□□□□□ -1.54
CLCN3-202ENST00000360642 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.4□□□□□ -1.54
CLCN3-202ENST00000360642 ID1P41134 155 aa5.4□□□□□ -1.54
CLCN3-202ENST00000360642 C10orf99Q6UWK7 81 aa5.4□□□□□ -1.54
CLCN3-202ENST00000360642 TTTY13Q9BZ97 58 aa5.4□□□□□ -1.54
CLCN3-202ENST00000360642 ZNF469Q96JG9 3925 aaPredicted RBP5.4□□□□□ -1.55
CLCN3-202ENST00000360642 PLNP26678 52 aa5.4□□□□□ -1.55
CLCN3-202ENST00000360642 GAGE2BQ13066 116 aa5.4□□□□□ -1.55
CLCN3-202ENST00000360642 GAGE2EQ4V326 116 aa5.4□□□□□ -1.55
CLCN3-202ENST00000360642 GAGE2AQ6NT46 116 aa5.4□□□□□ -1.55
CLCN3-202ENST00000360642 AP1S3Q96PC3 154 aa5.4□□□□□ -1.55
CLCN3-202ENST00000360642 GAGE2DQ9UEU5 116 aa5.4□□□□□ -1.55
CLCN3-202ENST00000360642 LRRK2Q5S007 2527 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 TRBV25-1A0A075B6N4 114 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 IGHV4OR15-8A0A075B7B6 117 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 A0A087WW49 117 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 J3QLI3 93 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 PPP1R17O96001 155 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 IGHV4-30-4P0DP06 118 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 RBX1P62877 108 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 UFSP1Q6NVU6 142 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 ODF3Q96PU9 254 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 TLN2Q9Y4G6 2542 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 F8VRH5 84 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 H7C1H1 209 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 RPL32P62910 135 aaKnown RBP5.39□□□□□ -1.55
CLCN3-202ENST00000360642 MUC4Q99102 2169 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 CREBBPQ92793 2442 aa5.39□□□□□ -1.55
CLCN3-202ENST00000360642 IGLV5-52A0A0A0MRZ9 124 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 PRB1P04280 392 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 NAA38Q9BRA0 125 aaKnown RBP5.38□□□□□ -1.55
CLCN3-202ENST00000360642 CHAC1Q9BUX1 264 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 CBY1Q9Y3M2 126 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 ZNF462Q96JM2 2506 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 USP24Q9UPU5 2620 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 FSHBP01225 129 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 MGPP08493 103 aa5.38□□□□□ -1.55
CLCN3-202ENST00000360642 FAM159AQ6UWV7 190 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms