RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 HIST1H2BBP33778 126 aa17.8■□□□□ 0.44
SHARPIN-201ENST00000359551 HIST1H2BDP58876 126 aa17.8■□□□□ 0.44
SHARPIN-201ENST00000359551 HIST1H2BCP62807 126 aa17.8■□□□□ 0.44
SHARPIN-201ENST00000359551 HIST2H2BEQ16778 126 aa17.8■□□□□ 0.44
SHARPIN-201ENST00000359551 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.8■□□□□ 0.44
SHARPIN-201ENST00000359551 Q6ZTI0 123 aa17.8■□□□□ 0.44
SHARPIN-201ENST00000359551 SBSPONQ8IVN8 264 aa17.8■□□□□ 0.44
SHARPIN-201ENST00000359551 HIST1H2BHQ93079 126 aa17.8■□□□□ 0.44
SHARPIN-201ENST00000359551 HIST1H2BNQ99877 126 aa17.8■□□□□ 0.44
SHARPIN-201ENST00000359551 HIST1H2BMQ99879 126 aa17.8■□□□□ 0.44
SHARPIN-201ENST00000359551 SAMD10Q9BYL1 202 aa17.8■□□□□ 0.44
SHARPIN-201ENST00000359551 DEFB121Q5J5C9 76 aa17.79■□□□□ 0.44
SHARPIN-201ENST00000359551 U3KQK5 164 aa17.79■□□□□ 0.44
SHARPIN-201ENST00000359551 SMIM17P0DL12 118 aa17.78■□□□□ 0.44
SHARPIN-201ENST00000359551 A0A087WWL8 130 aa17.77■□□□□ 0.44
SHARPIN-201ENST00000359551 RS1O15537 224 aa17.77■□□□□ 0.44
SHARPIN-201ENST00000359551 UFSP1Q6NVU6 142 aa17.77■□□□□ 0.44
SHARPIN-201ENST00000359551 LINC00612Q8N6U2 182 aa17.77■□□□□ 0.44
SHARPIN-201ENST00000359551 ALKBH7Q9BT30 221 aaPredicted RBP17.77■□□□□ 0.44
SHARPIN-201ENST00000359551 RETNQ9HD89 108 aa17.77■□□□□ 0.44
SHARPIN-201ENST00000359551 CFAP126Q5VTH2 177 aa17.77■□□□□ 0.43
SHARPIN-201ENST00000359551 TMA7Q9Y2S6 64 aaKnown RBP17.77■□□□□ 0.43
SHARPIN-201ENST00000359551 PPBPP02775 128 aa17.76■□□□□ 0.43
SHARPIN-201ENST00000359551 SRIP30626 198 aa17.76■□□□□ 0.43
SHARPIN-201ENST00000359551 EMP1P54849 157 aa17.76■□□□□ 0.43
SHARPIN-201ENST00000359551 ORMDL3Q8N138 153 aa17.75■□□□□ 0.43
SHARPIN-201ENST00000359551 MRAP2Q96G30 205 aa17.75■□□□□ 0.43
SHARPIN-201ENST00000359551 TM2D3Q9BRN9 247 aa17.75■□□□□ 0.43
SHARPIN-201ENST00000359551 D6R8Y8 96 aa17.74■□□□□ 0.43
SHARPIN-201ENST00000359551 FAM74A4Q5TZK3 123 aa17.74■□□□□ 0.43
SHARPIN-201ENST00000359551 LYRM9A8MSI8 78 aa17.74■□□□□ 0.43
SHARPIN-201ENST00000359551 MGPP08493 103 aa17.74■□□□□ 0.43
SHARPIN-201ENST00000359551 CKS2P33552 79 aa17.74■□□□□ 0.43
SHARPIN-201ENST00000359551 RHODO00212 210 aa17.73■□□□□ 0.43
SHARPIN-201ENST00000359551 ZFP2Q6ZN57 461 aa17.73■□□□□ 0.43
SHARPIN-201ENST00000359551 C18orf15Q96N68 181 aa17.73■□□□□ 0.43
SHARPIN-201ENST00000359551 TRAV4A0A0B4J268 109 aa17.72■□□□□ 0.43
SHARPIN-201ENST00000359551 GAGE12BA1L429 117 aa17.72■□□□□ 0.43
SHARPIN-201ENST00000359551 GAGE7O76087 117 aa17.72■□□□□ 0.43
SHARPIN-201ENST00000359551 GAGE12FP0CL80 117 aa17.72■□□□□ 0.43
SHARPIN-201ENST00000359551 GAGE12GP0CL81 117 aa17.72■□□□□ 0.43
SHARPIN-201ENST00000359551 GAGE12IP0CL82 117 aa17.72■□□□□ 0.43
SHARPIN-201ENST00000359551 SPATA25Q9BR10 227 aa17.72■□□□□ 0.43
SHARPIN-201ENST00000359551 DKK2Q9UBU2 259 aa17.72■□□□□ 0.43
SHARPIN-201ENST00000359551 SMKR1H3BMG3 65 aa17.71■□□□□ 0.43
SHARPIN-201ENST00000359551 DEFB4AO15263 64 aa17.71■□□□□ 0.43
SHARPIN-201ENST00000359551 GAS8-AS1O95177 125 aa17.71■□□□□ 0.43
SHARPIN-201ENST00000359551 MRAPQ8TCY5 172 aa17.71■□□□□ 0.43
SHARPIN-201ENST00000359551 PRELID3AQ96N28 172 aa17.71■□□□□ 0.43
SHARPIN-201ENST00000359551 TRAV26-2A0A0B4J265 109 aa17.71■□□□□ 0.42
SHARPIN-201ENST00000359551 NCR2O95944 276 aa17.71■□□□□ 0.42
SHARPIN-201ENST00000359551 FAM222AQ5U5X8 452 aa17.71■□□□□ 0.42
SHARPIN-201ENST00000359551 OR4C5Q8NGB2 326 aa17.71■□□□□ 0.42
SHARPIN-201ENST00000359551 LAMTOR2Q9Y2Q5 125 aa17.71■□□□□ 0.42
SHARPIN-201ENST00000359551 ZNF56Q15929 161 aa17.7■□□□□ 0.42
SHARPIN-201ENST00000359551 SUMO4Q6EEV6 95 aa17.7■□□□□ 0.42
SHARPIN-201ENST00000359551 C18orf32Q8TCD1 76 aa17.7■□□□□ 0.42
SHARPIN-201ENST00000359551 EDA2RQ9HAV5 297 aa17.7■□□□□ 0.42
SHARPIN-201ENST00000359551 CIDEAO60543 219 aa17.69■□□□□ 0.42
SHARPIN-201ENST00000359551 Q0VG73 95 aa17.69■□□□□ 0.42
SHARPIN-201ENST00000359551 OR10J3Q5JRS4 329 aa17.69■□□□□ 0.42
SHARPIN-201ENST00000359551 NRACQ8N912 160 aa17.69■□□□□ 0.42
SHARPIN-201ENST00000359551 C11orf68Q9H3H3 251 aaKnown RBP17.69■□□□□ 0.42
SHARPIN-201ENST00000359551 TRGV2A0A075B6R0 118 aa17.68■□□□□ 0.42
SHARPIN-201ENST00000359551 F5H697 171 aa17.68■□□□□ 0.42
SHARPIN-201ENST00000359551 NPYP01303 97 aa17.67■□□□□ 0.42
SHARPIN-201ENST00000359551 GATA1P15976 413 aaPredicted RBP17.67■□□□□ 0.42
SHARPIN-201ENST00000359551 ZNF479Q96JC4 524 aa17.67■□□□□ 0.42
SHARPIN-201ENST00000359551 COA6Q5JTJ3 125 aaKnown RBP17.67■□□□□ 0.42
SHARPIN-201ENST00000359551 IGHV3-73A0A0B4J1V6 119 aa17.66■□□□□ 0.42
SHARPIN-201ENST00000359551 M0QY20 66 aa17.66■□□□□ 0.42
SHARPIN-201ENST00000359551 TNFRSF6BO95407 300 aa17.66■□□□□ 0.42
SHARPIN-201ENST00000359551 SPART-AS1P0CW21 52 aa17.66■□□□□ 0.42
SHARPIN-201ENST00000359551 IGHV3-53P01767 116 aa17.65■□□□□ 0.42
SHARPIN-201ENST00000359551 DEFB130BP0DP73 79 aa17.65■□□□□ 0.42
SHARPIN-201ENST00000359551 DEFB130AP0DP74 79 aa17.65■□□□□ 0.42
SHARPIN-201ENST00000359551 B9D2Q9BPU9 175 aa17.65■□□□□ 0.42
SHARPIN-201ENST00000359551 CELA1Q9UNI1 258 aa17.65■□□□□ 0.42
SHARPIN-201ENST00000359551 TEX48A0A1B0GUV7 120 aa17.64■□□□□ 0.42
SHARPIN-201ENST00000359551 PPP1R17O96001 155 aa17.64■□□□□ 0.42
SHARPIN-201ENST00000359551 FBN3Q75N90 2809 aa17.64■□□□□ 0.41
SHARPIN-201ENST00000359551 NDUFA6P56556 154 aa17.64■□□□□ 0.41
SHARPIN-201ENST00000359551 IQCJQ1A5X6 159 aa17.64■□□□□ 0.41
SHARPIN-201ENST00000359551 Q6ZSN1 163 aa17.64■□□□□ 0.41
SHARPIN-201ENST00000359551 PRSS47A8MTI9 375 aa17.63■□□□□ 0.41
SHARPIN-201ENST00000359551 RPL39LQ96EH5 51 aaKnown RBP17.63■□□□□ 0.41
SHARPIN-201ENST00000359551 TENM3Q9P273 2699 aa17.63■□□□□ 0.41
SHARPIN-201ENST00000359551 H7C1H1 209 aa17.62■□□□□ 0.41
SHARPIN-201ENST00000359551 S100A6P06703 90 aa17.61■□□□□ 0.41
SHARPIN-201ENST00000359551 C20orf78Q9BR46 151 aa17.61■□□□□ 0.41
SHARPIN-201ENST00000359551 ZMAT4Q9H898 229 aa17.61■□□□□ 0.41
SHARPIN-201ENST00000359551 TRBV6-5A0A0K0K1A5 114 aa17.6■□□□□ 0.41
SHARPIN-201ENST00000359551 LINC00310P59036 64 aa17.6■□□□□ 0.41
SHARPIN-201ENST00000359551 DAD1P61803 113 aa17.6■□□□□ 0.41
SHARPIN-201ENST00000359551 FHL2Q14192 279 aa17.6■□□□□ 0.41
SHARPIN-201ENST00000359551 BAGE3Q86Y29 109 aa17.6■□□□□ 0.41
SHARPIN-201ENST00000359551 MAP1LC3AQ9H492 121 aa17.6■□□□□ 0.41
SHARPIN-201ENST00000359551 NIT2Q9NQR4 276 aa17.59■□□□□ 0.41
SHARPIN-201ENST00000359551 C5orf52A6NGY3 159 aa17.58■□□□□ 0.41
SHARPIN-201ENST00000359551 SUMO2P61956 95 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms