RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ZNF705AQ6ZN79 300 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-203ENST00000359265 PTH2Q96A98 100 aa10.03□□□□□ -0.8
PDLIM5-203ENST00000359265 C16orf74Q96GX8 76 aa10.03□□□□□ -0.8
PDLIM5-203ENST00000359265 GSN-AS1Q9NRJ2 163 aa10.03□□□□□ -0.8
PDLIM5-203ENST00000359265 U3KQK5 164 aa10.03□□□□□ -0.8
PDLIM5-203ENST00000359265 D6R8Y8 96 aa10.02□□□□□ -0.81
PDLIM5-203ENST00000359265 MGPP08493 103 aa10.02□□□□□ -0.81
PDLIM5-203ENST00000359265 HOXA5P20719 270 aa10.02□□□□□ -0.81
PDLIM5-203ENST00000359265 CKS2P33552 79 aa10.02□□□□□ -0.81
PDLIM5-203ENST00000359265 ZNF876PQ49A33 203 aa10.02□□□□□ -0.81
PDLIM5-203ENST00000359265 PIK3CD-AS1Q5SR53 167 aa10.02□□□□□ -0.81
PDLIM5-203ENST00000359265 KPRPQ5T749 579 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-203ENST00000359265 C14orf178Q8N769 122 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-203ENST00000359265 MRAP2Q96G30 205 aa10.02□□□□□ -0.81
PDLIM5-203ENST00000359265 PRELID3AQ96N28 172 aa10.02□□□□□ -0.81
PDLIM5-203ENST00000359265 LAMTOR2Q9Y2Q5 125 aa10.02□□□□□ -0.81
PDLIM5-203ENST00000359265 PRM2P04554 102 aa10.01□□□□□ -0.81
PDLIM5-203ENST00000359265 IGHV4-30-4P0DP06 118 aa10.01□□□□□ -0.81
PDLIM5-203ENST00000359265 AZU1P20160 251 aa10.01□□□□□ -0.81
PDLIM5-203ENST00000359265 IQCJQ1A5X6 159 aa10.01□□□□□ -0.81
PDLIM5-203ENST00000359265 RRN3P1Q2M238 152 aa10.01□□□□□ -0.81
PDLIM5-203ENST00000359265 RNASE8Q8TDE3 154 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-203ENST00000359265 NDUFAF3Q9BU61 184 aa10.01□□□□□ -0.81
PDLIM5-203ENST00000359265 NACAE9PAV3 2078 aa10□□□□□ -0.81
PDLIM5-203ENST00000359265 A8MZ25 164 aa10□□□□□ -0.81
PDLIM5-203ENST00000359265 NCR2O95944 276 aa10□□□□□ -0.81
PDLIM5-203ENST00000359265 S100A2P29034 98 aa10□□□□□ -0.81
PDLIM5-203ENST00000359265 HIST3H2BBQ8N257 126 aa10□□□□□ -0.81
PDLIM5-203ENST00000359265 IL17DQ8TAD2 202 aa10□□□□□ -0.81
PDLIM5-203ENST00000359265 MRAPQ8TCY5 172 aa10□□□□□ -0.81
PDLIM5-203ENST00000359265 A8MWV9 139 aa9.99□□□□□ -0.81
PDLIM5-203ENST00000359265 SMKR1H3BMG3 65 aa9.99□□□□□ -0.81
PDLIM5-203ENST00000359265 SERF1AO75920 110 aa9.99□□□□□ -0.81
PDLIM5-203ENST00000359265 KIF25-AS1Q9Y6Z4 181 aa9.99□□□□□ -0.81
PDLIM5-203ENST00000359265 DNAH3Q8TD57 4116 aa9.99□□□□□ -0.81
PDLIM5-203ENST00000359265 SMIM9A6NGZ8 99 aa9.98□□□□□ -0.81
PDLIM5-203ENST00000359265 NPYP01303 97 aa9.98□□□□□ -0.81
PDLIM5-203ENST00000359265 ESDP10768 282 aa9.98□□□□□ -0.81
PDLIM5-203ENST00000359265 PDZD11Q5EBL8 140 aa9.98□□□□□ -0.81
PDLIM5-203ENST00000359265 POM121L12Q8N7R1 296 aa9.98□□□□□ -0.81
PDLIM5-203ENST00000359265 MAP1LC3AQ9H492 121 aa9.98□□□□□ -0.81
PDLIM5-203ENST00000359265 JPT2Q9H910 190 aa9.98□□□□□ -0.81
PDLIM5-203ENST00000359265 MRPL16Q9NX20 251 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-203ENST00000359265 TENM2Q9NT68 2774 aa9.98□□□□□ -0.81
PDLIM5-203ENST00000359265 HYDINQ4G0P3 5121 aa9.98□□□□□ -0.81
PDLIM5-203ENST00000359265 A0A087WWL8 130 aa9.97□□□□□ -0.81
PDLIM5-203ENST00000359265 LINC00310P59036 64 aa9.97□□□□□ -0.81
PDLIM5-203ENST00000359265 DAZ2Q13117 558 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-203ENST00000359265 ZNF56Q15929 161 aa9.97□□□□□ -0.81
PDLIM5-203ENST00000359265 FAM74A4Q5TZK3 123 aa9.97□□□□□ -0.81
PDLIM5-203ENST00000359265 RNASEKQ6P5S7 137 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-203ENST00000359265 DNAH1Q9P2D7 4330 aa9.96□□□□□ -0.81
PDLIM5-203ENST00000359265 TRAV26-2A0A0B4J265 109 aa9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 F5H697 171 aa9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 RHODO00212 210 aa9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 TNFRSF6BO95407 300 aa9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 PPP1R17O96001 155 aa9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 CRYGDP07320 174 aa9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 LINC00315P59091 139 aa9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 DEFB135Q30KP9 77 aa9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 LGALS9BQ3B8N2 356 aa9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 LCE2AQ5TA79 106 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 RASL10AQ92737 203 aa9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 TMEM18Q96B42 140 aa9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 CHCHD1Q96BP2 118 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 SAMD10Q9BYL1 202 aa9.96□□□□□ -0.82
PDLIM5-203ENST00000359265 TRGV1A0A0A0MS02 117 aa9.95□□□□□ -0.82
PDLIM5-203ENST00000359265 RS1O15537 224 aa9.95□□□□□ -0.82
PDLIM5-203ENST00000359265 NUPR1O60356 82 aa9.95□□□□□ -0.82
PDLIM5-203ENST00000359265 HSBP1O75506 76 aa9.95□□□□□ -0.82
PDLIM5-203ENST00000359265 Q6ZWC4 215 aa9.95□□□□□ -0.82
PDLIM5-203ENST00000359265 FA2HQ7L5A8 372 aa9.95□□□□□ -0.82
PDLIM5-203ENST00000359265 NIT1Q86X76 327 aa9.95□□□□□ -0.82
PDLIM5-203ENST00000359265 NRACQ8N912 160 aa9.95□□□□□ -0.82
PDLIM5-203ENST00000359265 PRSS3P2Q8NHM4 247 aa9.95□□□□□ -0.82
PDLIM5-203ENST00000359265 PLAC8L1A1L4L8 177 aa9.94□□□□□ -0.82
PDLIM5-203ENST00000359265 GAS8-AS1O95177 125 aa9.94□□□□□ -0.82
PDLIM5-203ENST00000359265 GATA1P15976 413 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-203ENST00000359265 AKR1D1P51857 326 aa9.94□□□□□ -0.82
PDLIM5-203ENST00000359265 SUMO4Q6EEV6 95 aa9.94□□□□□ -0.82
PDLIM5-203ENST00000359265 OVOL2Q9BRP0 275 aa9.94□□□□□ -0.82
PDLIM5-203ENST00000359265 NOP10Q9NPE3 64 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-203ENST00000359265 X6R8D5 127 aa9.94□□□□□ -0.82
PDLIM5-203ENST00000359265 LOC389332A0A1B0GUA5 103 aa9.93□□□□□ -0.82
PDLIM5-203ENST00000359265 IFITM10A6NMD0 228 aa9.93□□□□□ -0.82
PDLIM5-203ENST00000359265 H7C1H1 209 aa9.93□□□□□ -0.82
PDLIM5-203ENST00000359265 LINC00614P0C842 121 aa9.93□□□□□ -0.82
PDLIM5-203ENST00000359265 FABP4P15090 132 aa9.93□□□□□ -0.82
PDLIM5-203ENST00000359265 PMCHP20382 165 aa9.93□□□□□ -0.82
PDLIM5-203ENST00000359265 CFAP126Q5VTH2 177 aa9.93□□□□□ -0.82
PDLIM5-203ENST00000359265 URB1-AS1Q96HZ7 61 aa9.93□□□□□ -0.82
PDLIM5-203ENST00000359265 WWC2-AS2Q96NR7 200 aa9.93□□□□□ -0.82
PDLIM5-203ENST00000359265 HIST1H2BLQ99880 126 aa9.93□□□□□ -0.82
PDLIM5-203ENST00000359265 NXT2Q9NPJ8 142 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-203ENST00000359265 AP5S1Q9NUS5 200 aa9.93□□□□□ -0.82
PDLIM5-203ENST00000359265 PRSS47A8MTI9 375 aa9.92□□□□□ -0.82
PDLIM5-203ENST00000359265 IFI27P40305 119 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-203ENST00000359265 AMTP48728 403 aa9.92□□□□□ -0.82
PDLIM5-203ENST00000359265 ZFP2Q6ZN57 461 aa9.92□□□□□ -0.82
PDLIM5-203ENST00000359265 Q6ZTI0 123 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms