RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 RPP21Q9H633 154 aaKnown RBP9.58□□□□□ -0.88
GGPS1-202ENST00000358966 PRO0461Q9UI25 63 aa9.58□□□□□ -0.88
GGPS1-202ENST00000358966 F6UB75 175 aa9.58□□□□□ -0.88
GGPS1-202ENST00000358966 NCR2O95944 276 aa9.58□□□□□ -0.88
GGPS1-202ENST00000358966 SYNJ2BPP57105 145 aa9.58□□□□□ -0.88
GGPS1-202ENST00000358966 FAM162BQ5T6X4 162 aa9.58□□□□□ -0.88
GGPS1-202ENST00000358966 ZNF138P52744 262 aa9.57□□□□□ -0.88
GGPS1-202ENST00000358966 FAM231DQ6ZW35 169 aa9.57□□□□□ -0.88
GGPS1-202ENST00000358966 WFDC3Q8IUB2 231 aa9.57□□□□□ -0.88
GGPS1-202ENST00000358966 CHCHD1Q96BP2 118 aaKnown RBP9.57□□□□□ -0.88
GGPS1-202ENST00000358966 DAZAP1Q96EP5 407 aaKnown RBP9.57□□□□□ -0.88
GGPS1-202ENST00000358966 C16orf92Q96LL3 132 aa9.57□□□□□ -0.88
GGPS1-202ENST00000358966 PHLDA1Q8WV24 401 aaPredicted RBP9.57□□□□□ -0.88
GGPS1-202ENST00000358966 E9PLD3 99 aa9.56□□□□□ -0.88
GGPS1-202ENST00000358966 OR5AL1P0C617 328 aa9.56□□□□□ -0.88
GGPS1-202ENST00000358966 RASL11AQ6T310 242 aa9.56□□□□□ -0.88
GGPS1-202ENST00000358966 DAZ1Q9NQZ3 744 aaKnown RBP9.56□□□□□ -0.88
GGPS1-202ENST00000358966 K7EMI3 77 aa9.56□□□□□ -0.88
GGPS1-202ENST00000358966 Q6ZSV7 163 aa9.56□□□□□ -0.88
GGPS1-202ENST00000358966 NFE4Q86UQ8 179 aa9.56□□□□□ -0.88
GGPS1-202ENST00000358966 PRR25Q96S07 402 aa9.56□□□□□ -0.88
GGPS1-202ENST00000358966 KIR2DL4Q99706 377 aa9.56□□□□□ -0.88
GGPS1-202ENST00000358966 SLURP1P55000 103 aa9.55□□□□□ -0.88
GGPS1-202ENST00000358966 NDUFV3P56181 108 aaKnown RBP9.55□□□□□ -0.88
GGPS1-202ENST00000358966 PCP2Q8IVA1 136 aa9.55□□□□□ -0.88
GGPS1-202ENST00000358966 NHP2Q9NX24 153 aaKnown RBP9.55□□□□□ -0.88
GGPS1-202ENST00000358966 IGHV7-4-1A0A0J9YVY3 117 aa9.55□□□□□ -0.88
GGPS1-202ENST00000358966 TMEM213A2RRL7 107 aa9.55□□□□□ -0.88
GGPS1-202ENST00000358966 F8P00451 2351 aa9.55□□□□□ -0.88
GGPS1-202ENST00000358966 A0A1W2PRX2 142 aa9.54□□□□□ -0.88
GGPS1-202ENST00000358966 SH2D1AO60880 128 aa9.54□□□□□ -0.88
GGPS1-202ENST00000358966 HOXD3P31249 432 aaPredicted RBP9.54□□□□□ -0.88
GGPS1-202ENST00000358966 AGPAT4-IT1Q9H0P7 198 aa9.54□□□□□ -0.88
GGPS1-202ENST00000358966 IGLL5B9A064 214 aa9.54□□□□□ -0.88
GGPS1-202ENST00000358966 NMUP48645 174 aa9.54□□□□□ -0.88
GGPS1-202ENST00000358966 ZNF492Q9P255 531 aa9.54□□□□□ -0.88
GGPS1-202ENST00000358966 HAX1O00165 279 aa9.53□□□□□ -0.88
GGPS1-202ENST00000358966 SLC50A1Q9BRV3 221 aa9.53□□□□□ -0.88
GGPS1-202ENST00000358966 ATRQ13535 2644 aa9.53□□□□□ -0.88
GGPS1-202ENST00000358966 NPIPB6E9PJ23 425 aa9.53□□□□□ -0.88
GGPS1-202ENST00000358966 LGALS1P09382 135 aaKnown RBP9.53□□□□□ -0.88
GGPS1-202ENST00000358966 FAM106AQ4KMX7 169 aa9.53□□□□□ -0.88
GGPS1-202ENST00000358966 FAM159AQ6UWV7 190 aa9.53□□□□□ -0.88
GGPS1-202ENST00000358966 A8MWL6 223 aa9.52□□□□□ -0.89
GGPS1-202ENST00000358966 SOCS3O14543 225 aa9.52□□□□□ -0.89
GGPS1-202ENST00000358966 ARMS2P0C7Q2 107 aa9.52□□□□□ -0.89
GGPS1-202ENST00000358966 PRR9Q5T870 116 aa9.52□□□□□ -0.89
GGPS1-202ENST00000358966 ZNF580Q9UK33 172 aa9.52□□□□□ -0.89
GGPS1-202ENST00000358966 RHODO00212 210 aa9.52□□□□□ -0.89
GGPS1-202ENST00000358966 ELANEP08246 267 aa9.52□□□□□ -0.89
GGPS1-202ENST00000358966 MYOZ3Q8TDC0 251 aa9.52□□□□□ -0.89
GGPS1-202ENST00000358966 ZNF747Q9BV97 191 aa9.52□□□□□ -0.89
GGPS1-202ENST00000358966 Q8N2B8 174 aa9.51□□□□□ -0.89
GGPS1-202ENST00000358966 C3orf56Q8N813 242 aa9.51□□□□□ -0.89
GGPS1-202ENST00000358966 SPRY2O43597 315 aa9.51□□□□□ -0.89
GGPS1-202ENST00000358966 CSN3P07498 182 aa9.51□□□□□ -0.89
GGPS1-202ENST00000358966 MEIG1Q5JSS6 88 aa9.51□□□□□ -0.89
GGPS1-202ENST00000358966 ZNF575Q86XF7 245 aa9.51□□□□□ -0.89
GGPS1-202ENST00000358966 KLHL30-AS1Q8NEE0 82 aa9.51□□□□□ -0.89
GGPS1-202ENST00000358966 UBE2E2Q96LR5 201 aa9.51□□□□□ -0.89
GGPS1-202ENST00000358966 C11orf21Q9P2W6 132 aa9.51□□□□□ -0.89
GGPS1-202ENST00000358966 TRBV6-1A0A0K0K1D8 114 aa9.5□□□□□ -0.89
GGPS1-202ENST00000358966 WIPF1O43516 503 aa9.5□□□□□ -0.89
GGPS1-202ENST00000358966 LY6G6DO95868 133 aa9.5□□□□□ -0.89
GGPS1-202ENST00000358966 ATP6V0E2Q8NHE4 81 aa9.5□□□□□ -0.89
GGPS1-202ENST00000358966 SMIM9A6NGZ8 99 aa9.5□□□□□ -0.89
GGPS1-202ENST00000358966 ORM1P02763 201 aa9.5□□□□□ -0.89
GGPS1-202ENST00000358966 ZNF688P0C7X2 276 aa9.5□□□□□ -0.89
GGPS1-202ENST00000358966 RBPMS2Q6ZRY4 209 aaKnown RBP9.5□□□□□ -0.89
GGPS1-202ENST00000358966 A0A1B0GXF2 115 aa9.49□□□□□ -0.89
GGPS1-202ENST00000358966 SMCPP49901 116 aaPredicted RBP9.49□□□□□ -0.89
GGPS1-202ENST00000358966 GAGE2BQ13066 116 aa9.49□□□□□ -0.89
GGPS1-202ENST00000358966 GAGE2EQ4V326 116 aa9.49□□□□□ -0.89
GGPS1-202ENST00000358966 TMEM78Q5T7P6 136 aa9.49□□□□□ -0.89
GGPS1-202ENST00000358966 GAGE2DQ9UEU5 116 aa9.49□□□□□ -0.89
GGPS1-202ENST00000358966 TRRAPQ9Y4A5 3859 aa9.49□□□□□ -0.89
GGPS1-202ENST00000358966 IGKV3-20P01619 116 aa9.49□□□□□ -0.89
GGPS1-202ENST00000358966 TTC32Q5I0X7 151 aa9.49□□□□□ -0.89
GGPS1-202ENST00000358966 OR8A1Q8NGG7 326 aa9.49□□□□□ -0.89
GGPS1-202ENST00000358966 MAP1LC3AQ9H492 121 aa9.49□□□□□ -0.89
GGPS1-202ENST00000358966 CD28P10747 220 aa9.48□□□□□ -0.89
GGPS1-202ENST00000358966 IFITM1P13164 125 aa9.48□□□□□ -0.89
GGPS1-202ENST00000358966 DCANP1Q8TF63 244 aa9.48□□□□□ -0.89
GGPS1-202ENST00000358966 HBBP68871 147 aa9.48□□□□□ -0.89
GGPS1-202ENST00000358966 CT83Q5H943 113 aa9.48□□□□□ -0.89
GGPS1-202ENST00000358966 LYZL1Q6UWQ5 148 aa9.48□□□□□ -0.89
GGPS1-202ENST00000358966 BAHCC1Q9P281 2608 aa9.48□□□□□ -0.89
GGPS1-202ENST00000358966 INAFM1C9JVW0 142 aa9.47□□□□□ -0.89
GGPS1-202ENST00000358966 RNF152Q8N8N0 203 aa9.47□□□□□ -0.89
GGPS1-202ENST00000358966 CARD19Q96LW7 228 aa9.47□□□□□ -0.89
GGPS1-202ENST00000358966 TTTY13Q9BZ97 58 aa9.47□□□□□ -0.89
GGPS1-202ENST00000358966 TMEM89A2RUT3 159 aa9.47□□□□□ -0.89
GGPS1-202ENST00000358966 DLX4Q92988 240 aaPredicted RBP9.47□□□□□ -0.89
GGPS1-202ENST00000358966 CHAC1Q9BUX1 264 aa9.47□□□□□ -0.89
GGPS1-202ENST00000358966 MSRB1Q9NZV6 116 aa9.47□□□□□ -0.89
GGPS1-202ENST00000358966 PSMG4Q5JS54 123 aa9.47□□□□□ -0.89
GGPS1-202ENST00000358966 CFAP126Q5VTH2 177 aa9.47□□□□□ -0.89
GGPS1-202ENST00000358966 LINC01006Q8NI28 216 aa9.47□□□□□ -0.89
GGPS1-202ENST00000358966 IGKV3D-20A0A0C4DH25 116 aa9.46□□□□□ -0.89
GGPS1-202ENST00000358966 LOC107984640A0A0U1RRK4 108 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms