RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 FGF23Q9GZV9 251 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-202ENST00000358808 IGHV4-61A0A0C4DH41 118 aa7.93□□□□□ -1.14
CLIP1-202ENST00000358808 IGHV2-70P01814 119 aa7.93□□□□□ -1.14
CLIP1-202ENST00000358808 MYCNOSP40205 109 aa7.93□□□□□ -1.14
CLIP1-202ENST00000358808 CXCL5P42830 114 aa7.93□□□□□ -1.14
CLIP1-202ENST00000358808 AJUBAQ96IF1 538 aa7.93□□□□□ -1.14
CLIP1-202ENST00000358808 FAM215AQ9Y5M1 114 aa7.93□□□□□ -1.14
CLIP1-202ENST00000358808 TRBV10-2A0A0K0K1G8 114 aa7.93□□□□□ -1.14
CLIP1-202ENST00000358808 RBAKDNA6NC62 111 aa7.93□□□□□ -1.14
CLIP1-202ENST00000358808 ZNF491Q8N8L2 437 aa7.93□□□□□ -1.14
CLIP1-202ENST00000358808 IGLL1P15814 213 aa7.93□□□□□ -1.14
CLIP1-202ENST00000358808 FAM19A1Q7Z5A9 133 aa7.93□□□□□ -1.14
CLIP1-202ENST00000358808 COX7BP24311 80 aa7.92□□□□□ -1.14
CLIP1-202ENST00000358808 UPK3BQ9BT76 320 aa7.92□□□□□ -1.14
CLIP1-202ENST00000358808 KIR2DL5BA0A0G2JN68 375 aa7.92□□□□□ -1.14
CLIP1-202ENST00000358808 KIR2DL5BA0A0G2JPC4 375 aa7.92□□□□□ -1.14
CLIP1-202ENST00000358808 IGLC7A0M8Q6 106 aa7.92□□□□□ -1.14
CLIP1-202ENST00000358808 ATOX1O00244 68 aa7.92□□□□□ -1.14
CLIP1-202ENST00000358808 LECT2O14960 151 aa7.92□□□□□ -1.14
CLIP1-202ENST00000358808 KIR2DL5AQ8N109 375 aa7.92□□□□□ -1.14
CLIP1-202ENST00000358808 NCOR1P1Q9H4R4 102 aa7.92□□□□□ -1.14
CLIP1-202ENST00000358808 POU2AF1Q16633 256 aa7.92□□□□□ -1.14
CLIP1-202ENST00000358808 C7orf33Q8WU49 177 aa7.92□□□□□ -1.14
CLIP1-202ENST00000358808 NRGNQ92686 78 aa7.92□□□□□ -1.14
CLIP1-202ENST00000358808 B5MCH6 92 aa7.91□□□□□ -1.14
CLIP1-202ENST00000358808 K7EMI3 77 aa7.91□□□□□ -1.14
CLIP1-202ENST00000358808 SIVA1O15304 175 aa7.91□□□□□ -1.14
CLIP1-202ENST00000358808 GATA1P15976 413 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-202ENST00000358808 CENPVL3A0A0U1RRI6 287 aa7.91□□□□□ -1.14
CLIP1-202ENST00000358808 IGKV1-17P01599 117 aa7.91□□□□□ -1.14
CLIP1-202ENST00000358808 GRNP28799 593 aaKnown RBP7.91□□□□□ -1.14
CLIP1-202ENST00000358808 IGF2-ASQ6U949 168 aa7.91□□□□□ -1.14
CLIP1-202ENST00000358808 PROK2Q9HC23 129 aa7.91□□□□□ -1.14
CLIP1-202ENST00000358808 TRBV7-3A0A075B6L6 115 aa7.91□□□□□ -1.14
CLIP1-202ENST00000358808 FHL1Q13642 323 aa7.91□□□□□ -1.14
CLIP1-202ENST00000358808 A0A0J9YXV3 536 aa7.91□□□□□ -1.14
CLIP1-202ENST00000358808 JMJD7-PLA2G4BH0Y9G9 81 aa7.91□□□□□ -1.14
CLIP1-202ENST00000358808 C3orf22Q8N5N4 141 aa7.91□□□□□ -1.14
CLIP1-202ENST00000358808 BRK1Q8WUW1 75 aa7.91□□□□□ -1.14
CLIP1-202ENST00000358808 CCL25O15444 150 aa7.9□□□□□ -1.14
CLIP1-202ENST00000358808 LYPD6BQ8NI32 183 aa7.9□□□□□ -1.14
CLIP1-202ENST00000358808 LINC01545Q5VT33 79 aa7.9□□□□□ -1.14
CLIP1-202ENST00000358808 BLCAPP62952 87 aa7.9□□□□□ -1.15
CLIP1-202ENST00000358808 SMIM20Q8N5G0 67 aa7.9□□□□□ -1.15
CLIP1-202ENST00000358808 YLPM1P49750 1951 aaKnown RBP7.89□□□□□ -1.15
CLIP1-202ENST00000358808 TAX1BP3O14907 124 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 ANAPC1Q9H1A4 1944 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 FAM236AA0A1B0GUQ0 79 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 FAM236BA0A1B0GV22 79 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 ZNF726P1Q15940 193 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 C4orf3Q8WVX3 66 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 SLX1AQ9BQ83 275 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 LENEPQ9Y5L5 61 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 WNK1Q9H4A3 2382 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 PCNX2A6NKB5 2137 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 C15orf65H3BRN8 121 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 IGLV1-44P01699 117 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 HILS1P60008 231 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 PRR15LQ9BU68 103 aa7.89□□□□□ -1.15
CLIP1-202ENST00000358808 IGKV1D-37A0A075B6S9 117 aa7.88□□□□□ -1.15
CLIP1-202ENST00000358808 C2orf70A6NJV1 201 aa7.88□□□□□ -1.15
CLIP1-202ENST00000358808 CRYGDP07320 174 aa7.88□□□□□ -1.15
CLIP1-202ENST00000358808 IGKV2D-26A0A0A0MRZ7 120 aa7.88□□□□□ -1.15
CLIP1-202ENST00000358808 A4D1N5 150 aa7.88□□□□□ -1.15
CLIP1-202ENST00000358808 TMEM256-PLSCR3K7ERE1 68 aa7.88□□□□□ -1.15
CLIP1-202ENST00000358808 BPY2O14599 106 aa7.88□□□□□ -1.15
CLIP1-202ENST00000358808 UBE2D3P61077 147 aa7.88□□□□□ -1.15
CLIP1-202ENST00000358808 Q8N1Y9 231 aa7.88□□□□□ -1.15
CLIP1-202ENST00000358808 PCP2Q8IVA1 136 aa7.87□□□□□ -1.15
CLIP1-202ENST00000358808 KAAG1Q9UBP8 84 aa7.87□□□□□ -1.15
CLIP1-202ENST00000358808 ZNF503-AS2A6NEH8 195 aa7.87□□□□□ -1.15
CLIP1-202ENST00000358808 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-202ENST00000358808 CRYGBP07316 175 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 MIR7-3HGQ8N6C7 128 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 Q6ZVH6 145 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 C1orf147Q96MC9 270 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-202ENST00000358808 DYSFO75923 2080 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 A0A0J9YWU9 116 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 LGALS9O00182 355 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 CDPF1Q6NVV7 123 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 TEX49A0A1B0GTD5 131 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 WT1P19544 449 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-202ENST00000358808 WFDC10BQ8IUB3 73 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 CTSZQ9UBR2 303 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 J3KT08 172 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 INSL3P51460 131 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 CLEC2BQ92478 149 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 PRO0255Q9UI72 69 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 C2orf16Q68DN1 1984 aa7.86□□□□□ -1.15
CLIP1-202ENST00000358808 C16orf54Q6UWD8 224 aa7.85□□□□□ -1.15
CLIP1-202ENST00000358808 Q8N9W7 124 aa7.85□□□□□ -1.15
CLIP1-202ENST00000358808 C10orf105Q8TEF2 133 aa7.85□□□□□ -1.15
CLIP1-202ENST00000358808 IGHV7-81A0A0B4J1V7 117 aa7.85□□□□□ -1.15
CLIP1-202ENST00000358808 RPL39P62891 51 aaKnown RBP7.85□□□□□ -1.15
CLIP1-202ENST00000358808 SPINK6Q6UWN8 80 aa7.85□□□□□ -1.15
CLIP1-202ENST00000358808 FAM19A5Q7Z5A7 132 aaPredicted RBP7.85□□□□□ -1.15
CLIP1-202ENST00000358808 SERP1Q9Y6X1 66 aa7.85□□□□□ -1.15
CLIP1-202ENST00000358808 TRAV26-1A0A087WT03 109 aa7.85□□□□□ -1.15
CLIP1-202ENST00000358808 C10orf91Q5T1B1 145 aa7.85□□□□□ -1.15
CLIP1-202ENST00000358808 MPLKIPQ8TAP9 179 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms