RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 IGKV2-29A2NJV5 120 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC11-202ENST00000357207 LINC01620Q4KN68 170 aa12.06□□□□□ -0.48
TRAPPC11-202ENST00000357207 HCFC1P51610 2035 aa12.05□□□□□ -0.48
TRAPPC11-202ENST00000357207 PRSS47A8MTI9 375 aa12.05□□□□□ -0.48
TRAPPC11-202ENST00000357207 BAALCQ8WXS3 180 aa12.05□□□□□ -0.48
TRAPPC11-202ENST00000357207 C1orf229Q6ZS94 237 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC11-202ENST00000357207 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
TRAPPC11-202ENST00000357207 TP73-AS1Q9UF72 201 aa12.05□□□□□ -0.48
TRAPPC11-202ENST00000357207 BAALC-AS2P0C853 105 aa12.04□□□□□ -0.48
TRAPPC11-202ENST00000357207 AJUBAQ96IF1 538 aa12.04□□□□□ -0.48
TRAPPC11-202ENST00000357207 C11orf86A6NJI1 115 aa12.04□□□□□ -0.48
TRAPPC11-202ENST00000357207 HAMPP81172 84 aa12.04□□□□□ -0.48
TRAPPC11-202ENST00000357207 TANC2Q9HCD6 1990 aa12.03□□□□□ -0.48
TRAPPC11-202ENST00000357207 NAV3Q8IVL0 2385 aa12.03□□□□□ -0.48
TRAPPC11-202ENST00000357207 TIMM17AQ99595 171 aa12.03□□□□□ -0.48
TRAPPC11-202ENST00000357207 Q8N7P7 452 aa12.03□□□□□ -0.48
TRAPPC11-202ENST00000357207 PIEZO2Q9H5I5 2752 aa12.02□□□□□ -0.48
TRAPPC11-202ENST00000357207 ZNF80P51504 273 aaPredicted RBP12.02□□□□□ -0.48
TRAPPC11-202ENST00000357207 U3KQE9 123 aa12.02□□□□□ -0.48
TRAPPC11-202ENST00000357207 KIAA1549Q9HCM3 1950 aa12.02□□□□□ -0.48
TRAPPC11-202ENST00000357207 SS18L2Q9UHA2 77 aa12.02□□□□□ -0.49
TRAPPC11-202ENST00000357207 ACYP1P07311 99 aa12.02□□□□□ -0.49
TRAPPC11-202ENST00000357207 BLCAPP62952 87 aa12.02□□□□□ -0.49
TRAPPC11-202ENST00000357207 TINCRA0A1B0GVN0 87 aa12.01□□□□□ -0.49
TRAPPC11-202ENST00000357207 HOXD3P31249 432 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC11-202ENST00000357207 OTOGLQ3ZCN5 2332 aa12.01□□□□□ -0.49
TRAPPC11-202ENST00000357207 MED14OSP0DP75 135 aa12□□□□□ -0.49
TRAPPC11-202ENST00000357207 RS1O15537 224 aa12□□□□□ -0.49
TRAPPC11-202ENST00000357207 IGHV4-59P01825 116 aa12□□□□□ -0.49
TRAPPC11-202ENST00000357207 TRACP01848 142 aa12□□□□□ -0.49
TRAPPC11-202ENST00000357207 PTH2Q96A98 100 aa12□□□□□ -0.49
TRAPPC11-202ENST00000357207 ICOSQ9Y6W8 199 aa12□□□□□ -0.49
TRAPPC11-202ENST00000357207 J3QLI3 93 aa11.99□□□□□ -0.49
TRAPPC11-202ENST00000357207 IGLC6P0CF74 106 aa11.99□□□□□ -0.49
TRAPPC11-202ENST00000357207 DEFB1P60022 68 aa11.99□□□□□ -0.49
TRAPPC11-202ENST00000357207 SLC25A29Q8N8R3 303 aa11.99□□□□□ -0.49
TRAPPC11-202ENST00000357207 RNF114Q9Y508 228 aa11.99□□□□□ -0.49
TRAPPC11-202ENST00000357207 CRLF1O75462 422 aa11.99□□□□□ -0.49
TRAPPC11-202ENST00000357207 HERV-K104P63124 156 aa11.99□□□□□ -0.49
TRAPPC11-202ENST00000357207 DEFB112Q30KQ8 113 aa11.98□□□□□ -0.49
TRAPPC11-202ENST00000357207 C5orf56Q8N8D9 126 aa11.98□□□□□ -0.49
TRAPPC11-202ENST00000357207 Q8N1Y9 231 aa11.98□□□□□ -0.49
TRAPPC11-202ENST00000357207 LTBP2Q14767 1821 aa11.98□□□□□ -0.49
TRAPPC11-202ENST00000357207 RBX1P62877 108 aa11.97□□□□□ -0.49
TRAPPC11-202ENST00000357207 IGF2-ASQ6U949 168 aa11.97□□□□□ -0.49
TRAPPC11-202ENST00000357207 RPL32P62910 135 aaKnown RBP11.97□□□□□ -0.49
TRAPPC11-202ENST00000357207 ATP6V0E2Q8NHE4 81 aa11.97□□□□□ -0.49
TRAPPC11-202ENST00000357207 PIFOQ8TCI5 191 aa11.97□□□□□ -0.49
TRAPPC11-202ENST00000357207 F5H768 121 aa11.96□□□□□ -0.49
TRAPPC11-202ENST00000357207 IGHV4-61A0A0C4DH41 118 aa11.96□□□□□ -0.49
TRAPPC11-202ENST00000357207 ZNF561-AS1K7EIQ3 104 aa11.96□□□□□ -0.49
TRAPPC11-202ENST00000357207 SMIM20Q8N5G0 67 aa11.96□□□□□ -0.49
TRAPPC11-202ENST00000357207 TM2D2Q9BX73 214 aa11.96□□□□□ -0.49
TRAPPC11-202ENST00000357207 TLN1Q9Y490 2541 aaKnown RBP11.96□□□□□ -0.49
TRAPPC11-202ENST00000357207 TMEM126AQ9H061 195 aa11.96□□□□□ -0.5
TRAPPC11-202ENST00000357207 DAD1P61803 113 aa11.95□□□□□ -0.5
TRAPPC11-202ENST00000357207 NDUFA11Q86Y39 141 aa11.95□□□□□ -0.5
TRAPPC11-202ENST00000357207 IGHV4-38-2P0DP08 117 aa11.95□□□□□ -0.5
TRAPPC11-202ENST00000357207 MYCNOSP40205 109 aa11.95□□□□□ -0.5
TRAPPC11-202ENST00000357207 TRAV26-1A0A087WT03 109 aa11.95□□□□□ -0.5
TRAPPC11-202ENST00000357207 TRBV10-2A0A0K0K1G8 114 aa11.95□□□□□ -0.5
TRAPPC11-202ENST00000357207 NOP10Q9NPE3 64 aaKnown RBP11.95□□□□□ -0.5
TRAPPC11-202ENST00000357207 SP5Q6BEB4 398 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC11-202ENST00000357207 VPREB3Q9UKI3 123 aa11.95□□□□□ -0.5
TRAPPC11-202ENST00000357207 CCDC168Q8NDH2 2452 aa11.94□□□□□ -0.5
TRAPPC11-202ENST00000357207 H3BT86 120 aa11.94□□□□□ -0.5
TRAPPC11-202ENST00000357207 K7EMT4 169 aa11.94□□□□□ -0.5
TRAPPC11-202ENST00000357207 ZFP36P26651 326 aaKnown RBP11.94□□□□□ -0.5
TRAPPC11-202ENST00000357207 C5orf38Q86SI9 138 aa11.94□□□□□ -0.5
TRAPPC11-202ENST00000357207 C20orf203Q8NBC4 194 aa11.94□□□□□ -0.5
TRAPPC11-202ENST00000357207 CITED1Q99966 193 aa11.94□□□□□ -0.5
TRAPPC11-202ENST00000357207 F8WEM9 126 aa11.94□□□□□ -0.5
TRAPPC11-202ENST00000357207 DAZAP2Q15038 168 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC11-202ENST00000357207 DEFB136Q30KP8 78 aa11.94□□□□□ -0.5
TRAPPC11-202ENST00000357207 DSCR8Q96T75 97 aa11.94□□□□□ -0.5
TRAPPC11-202ENST00000357207 EP400Q96L91 3159 aa11.94□□□□□ -0.5
TRAPPC11-202ENST00000357207 DAND5Q8N907 189 aa11.93□□□□□ -0.5
TRAPPC11-202ENST00000357207 H0YGX0 51 aa11.93□□□□□ -0.5
TRAPPC11-202ENST00000357207 ANGP03950 147 aaKnown RBP11.93□□□□□ -0.5
TRAPPC11-202ENST00000357207 CRIP1P50238 77 aa11.93□□□□□ -0.5
TRAPPC11-202ENST00000357207 SND1-IT1Q9HBX3 110 aa11.93□□□□□ -0.5
TRAPPC11-202ENST00000357207 IGKV2D-26A0A0A0MRZ7 120 aa11.93□□□□□ -0.5
TRAPPC11-202ENST00000357207 UNQ9165/PRO28630Q6UXU0 137 aa11.93□□□□□ -0.5
TRAPPC11-202ENST00000357207 ORMDL1Q9P0S3 153 aa11.93□□□□□ -0.5
TRAPPC11-202ENST00000357207 XCL1P47992 114 aa11.92□□□□□ -0.5
TRAPPC11-202ENST00000357207 SPANXCQ9NY87 97 aa11.92□□□□□ -0.5
TRAPPC11-202ENST00000357207 LINC00310P59036 64 aa11.92□□□□□ -0.5
TRAPPC11-202ENST00000357207 APRG1Q8IVJ8 170 aa11.92□□□□□ -0.5
TRAPPC11-202ENST00000357207 RNF152Q8N8N0 203 aa11.92□□□□□ -0.5
TRAPPC11-202ENST00000357207 CLPSL2Q6UWE3 100 aa11.91□□□□□ -0.5
TRAPPC11-202ENST00000357207 FAM236AA0A1B0GUQ0 79 aa11.91□□□□□ -0.5
TRAPPC11-202ENST00000357207 FAM236BA0A1B0GV22 79 aa11.91□□□□□ -0.5
TRAPPC11-202ENST00000357207 A0A096LPF7 62 aa11.91□□□□□ -0.5
TRAPPC11-202ENST00000357207 OPRPNQ99935 248 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC11-202ENST00000357207 TCL1BO95988 128 aa11.91□□□□□ -0.5
TRAPPC11-202ENST00000357207 A0A0B4J2C4 111 aa11.9□□□□□ -0.5
TRAPPC11-202ENST00000357207 IGHV3-30-3P0DP02 117 aa11.9□□□□□ -0.5
TRAPPC11-202ENST00000357207 MDFICQ9P1T7 246 aa11.9□□□□□ -0.5
TRAPPC11-202ENST00000357207 SLURP1P55000 103 aa11.9□□□□□ -0.5
TRAPPC11-202ENST00000357207 GPHB5Q86YW7 130 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms