RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 MSMBP08118 114 aa13.25□□□□□ -0.29
GYPC-202ENST00000356887 EDN2P20800 178 aa13.25□□□□□ -0.29
GYPC-202ENST00000356887 LRRK2Q5S007 2527 aa13.24□□□□□ -0.29
GYPC-202ENST00000356887 MYMXA0A1B0GTQ4 84 aa13.24□□□□□ -0.29
GYPC-202ENST00000356887 ATP5J2P56134 94 aa13.24□□□□□ -0.29
GYPC-202ENST00000356887 TRBV7-3A0A075B6L6 115 aa13.24□□□□□ -0.29
GYPC-202ENST00000356887 IGHV4OR15-8A0A075B7B6 117 aa13.24□□□□□ -0.29
GYPC-202ENST00000356887 A0A087WW49 117 aa13.24□□□□□ -0.29
GYPC-202ENST00000356887 PRSS29PA6NIE9 313 aa13.24□□□□□ -0.29
GYPC-202ENST00000356887 E9PLD3 99 aa13.24□□□□□ -0.29
GYPC-202ENST00000356887 F8W1H4 67 aa13.24□□□□□ -0.29
GYPC-202ENST00000356887 RPL32P62910 135 aaKnown RBP13.24□□□□□ -0.29
GYPC-202ENST00000356887 HIST1H4GQ99525 98 aa13.24□□□□□ -0.29
GYPC-202ENST00000356887 MUC4Q99102 2169 aa13.23□□□□□ -0.29
GYPC-202ENST00000356887 IGLL5B9A064 214 aa13.23□□□□□ -0.29
GYPC-202ENST00000356887 ID1P41134 155 aa13.23□□□□□ -0.29
GYPC-202ENST00000356887 C12orf74Q32Q52 190 aa13.23□□□□□ -0.29
GYPC-202ENST00000356887 DCANP1Q8TF63 244 aa13.23□□□□□ -0.29
GYPC-202ENST00000356887 AVPP01185 164 aa13.22□□□□□ -0.29
GYPC-202ENST00000356887 FAM159AQ6UWV7 190 aa13.22□□□□□ -0.29
GYPC-202ENST00000356887 ZNF580Q9UK33 172 aa13.22□□□□□ -0.29
GYPC-202ENST00000356887 UTP20O75691 2785 aaKnown RBP13.22□□□□□ -0.29
GYPC-202ENST00000356887 JPT2Q9H910 190 aa13.2□□□□□ -0.3
GYPC-202ENST00000356887 POLR2KP53803 58 aaKnown RBP13.2□□□□□ -0.3
GYPC-202ENST00000356887 SPANXB1Q9NS25 103 aaPredicted RBP13.2□□□□□ -0.3
GYPC-202ENST00000356887 SS18L2Q9UHA2 77 aa13.2□□□□□ -0.3
GYPC-202ENST00000356887 CYSLTR1Q9Y271 337 aa13.2□□□□□ -0.3
GYPC-202ENST00000356887 AGRNO00468 2067 aa13.2□□□□□ -0.3
GYPC-202ENST00000356887 DUSP14O95147 198 aaKnown RBP13.19□□□□□ -0.3
GYPC-202ENST00000356887 CRYGDP07320 174 aa13.19□□□□□ -0.3
GYPC-202ENST00000356887 LGALS1P09382 135 aaKnown RBP13.19□□□□□ -0.3
GYPC-202ENST00000356887 A0A1B0GWB2 263 aa13.19□□□□□ -0.3
GYPC-202ENST00000356887 PLA2G2AP14555 144 aa13.19□□□□□ -0.3
GYPC-202ENST00000356887 PSMB8P28062 276 aa13.19□□□□□ -0.3
GYPC-202ENST00000356887 SUMO4Q6EEV6 95 aa13.19□□□□□ -0.3
GYPC-202ENST00000356887 PRADC1Q9BSG0 188 aa13.19□□□□□ -0.3
GYPC-202ENST00000356887 TRAV12-3A0A0B4J271 114 aa13.18□□□□□ -0.3
GYPC-202ENST00000356887 B4DSR2 109 aa13.18□□□□□ -0.3
GYPC-202ENST00000356887 TSHBP01222 138 aa13.18□□□□□ -0.3
GYPC-202ENST00000356887 IGIPA6NJ69 53 aa13.17□□□□□ -0.3
GYPC-202ENST00000356887 CD7P09564 240 aa13.17□□□□□ -0.3
GYPC-202ENST00000356887 ZFP2Q6ZN57 461 aa13.17□□□□□ -0.3
GYPC-202ENST00000356887 LINC01549A6NIU2 74 aa13.17□□□□□ -0.3
GYPC-202ENST00000356887 VCYO14598 125 aa13.17□□□□□ -0.3
GYPC-202ENST00000356887 COX6B1P14854 86 aa13.17□□□□□ -0.3
GYPC-202ENST00000356887 ODF3Q96PU9 254 aa13.17□□□□□ -0.3
GYPC-202ENST00000356887 A0A087WWL8 130 aa13.16□□□□□ -0.3
GYPC-202ENST00000356887 TP53TG1Q9Y2A0 90 aa13.16□□□□□ -0.3
GYPC-202ENST00000356887 VPS13CQ709C8 3753 aa13.16□□□□□ -0.3
GYPC-202ENST00000356887 C9orf85Q96MD7 179 aa13.16□□□□□ -0.3
GYPC-202ENST00000356887 IGLV4-69A0A075B6H9 119 aa13.15□□□□□ -0.3
GYPC-202ENST00000356887 IGHV3-16A0A0C4DH30 117 aa13.15□□□□□ -0.3
GYPC-202ENST00000356887 J3QKU1 62 aa13.15□□□□□ -0.3
GYPC-202ENST00000356887 LGALS9O00182 355 aa13.15□□□□□ -0.3
GYPC-202ENST00000356887 RRN3P1Q2M238 152 aa13.15□□□□□ -0.3
GYPC-202ENST00000356887 CITED2Q99967 270 aaPredicted RBP13.15□□□□□ -0.3
GYPC-202ENST00000356887 CRYBG3Q68DQ2 2970 aa13.15□□□□□ -0.3
GYPC-202ENST00000356887 CELSR1Q9NYQ6 3014 aa13.15□□□□□ -0.3
GYPC-202ENST00000356887 TMEM141Q96I45 108 aa13.14□□□□□ -0.31
GYPC-202ENST00000356887 A0A0J9YX75 114 aa13.14□□□□□ -0.31
GYPC-202ENST00000356887 TRBV6-5A0A0K0K1A5 114 aa13.14□□□□□ -0.31
GYPC-202ENST00000356887 TMEM89A2RUT3 159 aa13.14□□□□□ -0.31
GYPC-202ENST00000356887 C11orf86A6NJI1 115 aa13.14□□□□□ -0.31
GYPC-202ENST00000356887 ZNF815PA8K554 130 aa13.14□□□□□ -0.31
GYPC-202ENST00000356887 F5H697 171 aa13.14□□□□□ -0.31
GYPC-202ENST00000356887 IGHV4-59P01825 116 aa13.14□□□□□ -0.31
GYPC-202ENST00000356887 ZNF688P0C7X2 276 aa13.14□□□□□ -0.31
GYPC-202ENST00000356887 GATA3P23771 443 aa13.14□□□□□ -0.31
GYPC-202ENST00000356887 PMVKQ15126 192 aa13.14□□□□□ -0.31
GYPC-202ENST00000356887 C10orf99Q6UWK7 81 aa13.14□□□□□ -0.31
GYPC-202ENST00000356887 KIR2DL4Q99706 377 aa13.14□□□□□ -0.31
GYPC-202ENST00000356887 DOPEY2Q9Y3R5 2298 aa13.13□□□□□ -0.31
GYPC-202ENST00000356887 DEFB112Q30KQ8 113 aa13.13□□□□□ -0.31
GYPC-202ENST00000356887 PAPPA-AS1Q5QFB9 102 aa13.13□□□□□ -0.31
GYPC-202ENST00000356887 PLEKHB2Q96CS7 222 aa13.13□□□□□ -0.31
GYPC-202ENST00000356887 SPAG8Q99932 426 aaPredicted RBP13.13□□□□□ -0.31
GYPC-202ENST00000356887 SPG11Q96JI7 2443 aa13.13□□□□□ -0.31
GYPC-202ENST00000356887 TRBV27A0A0K0K1C4 114 aa13.12□□□□□ -0.31
GYPC-202ENST00000356887 SDHAF1A6NFY7 115 aa13.12□□□□□ -0.31
GYPC-202ENST00000356887 K7EQG2 157 aa13.12□□□□□ -0.31
GYPC-202ENST00000356887 RPL39P62891 51 aaKnown RBP13.12□□□□□ -0.31
GYPC-202ENST00000356887 DEFB104AQ8WTQ1 72 aa13.12□□□□□ -0.31
GYPC-202ENST00000356887 RNF183Q96D59 192 aa13.12□□□□□ -0.31
GYPC-202ENST00000356887 TIMM17AQ99595 171 aa13.12□□□□□ -0.31
GYPC-202ENST00000356887 YAE1D1Q9NRH1 226 aa13.12□□□□□ -0.31
GYPC-202ENST00000356887 MDFICQ9P1T7 246 aa13.12□□□□□ -0.31
GYPC-202ENST00000356887 USP9YO00507 2555 aaPredicted RBP13.12□□□□□ -0.31
GYPC-202ENST00000356887 HOXA3O43365 443 aaPredicted RBP13.12□□□□□ -0.31
GYPC-202ENST00000356887 KLHL30-AS1Q8NEE0 82 aa13.11□□□□□ -0.31
GYPC-202ENST00000356887 NRGNQ92686 78 aa13.11□□□□□ -0.31
GYPC-202ENST00000356887 TRAV12-2A0A075B6T6 113 aa13.11□□□□□ -0.31
GYPC-202ENST00000356887 DSCR9P59020 149 aa13.11□□□□□ -0.31
GYPC-202ENST00000356887 SNRPD3P62318 126 aaKnown RBP13.11□□□□□ -0.31
GYPC-202ENST00000356887 MORN3Q6PF18 240 aaPredicted RBP13.11□□□□□ -0.31
GYPC-202ENST00000356887 VCX2Q9H322 139 aa13.11□□□□□ -0.31
GYPC-202ENST00000356887 TENM4Q6N022 2769 aa13.11□□□□□ -0.31
GYPC-202ENST00000356887 IGKV3-20P01619 116 aa13.1□□□□□ -0.31
GYPC-202ENST00000356887 SPINK8P0C7L1 97 aa13.1□□□□□ -0.31
GYPC-202ENST00000356887 WFDC2Q14508 124 aa13.1□□□□□ -0.31
GYPC-202ENST00000356887 SYT8Q8NBV8 401 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms