RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 DAZ2Q13117 558 aaKnown RBP13.56□□□□□ -0.24
COL27A1-201ENST00000356083 DAZ4Q86SG3 579 aaKnown RBP13.56□□□□□ -0.24
COL27A1-201ENST00000356083 DAZ3Q9NR90 486 aaKnown RBP13.56□□□□□ -0.24
COL27A1-201ENST00000356083 B5MCH6 92 aa13.56□□□□□ -0.24
COL27A1-201ENST00000356083 GRNP28799 593 aaKnown RBP13.56□□□□□ -0.24
COL27A1-201ENST00000356083 FAM110AQ9BQ89 295 aa13.56□□□□□ -0.24
COL27A1-201ENST00000356083 KIAA1549LQ6ZVL6 1849 aa13.55□□□□□ -0.24
COL27A1-201ENST00000356083 COLCA2A8K830 154 aa13.55□□□□□ -0.24
COL27A1-201ENST00000356083 IGHV4-30-4P0DP06 118 aa13.55□□□□□ -0.24
COL27A1-201ENST00000356083 IGHV4-31P0DP07 118 aa13.55□□□□□ -0.24
COL27A1-201ENST00000356083 FLVCR1-AS1Q8TAF5 88 aa13.55□□□□□ -0.24
COL27A1-201ENST00000356083 M0R2N4 97 aa13.55□□□□□ -0.24
COL27A1-201ENST00000356083 ZNF493Q6ZR52 646 aa13.55□□□□□ -0.24
COL27A1-201ENST00000356083 ZNF833PQ6ZTB9 187 aa13.55□□□□□ -0.24
COL27A1-201ENST00000356083 IGHV4-30-2A0A087WSY4 118 aa13.55□□□□□ -0.24
COL27A1-201ENST00000356083 TMEM190Q8WZ59 177 aa13.55□□□□□ -0.24
COL27A1-201ENST00000356083 F8P00451 2351 aa13.55□□□□□ -0.24
COL27A1-201ENST00000356083 ACANP16112 2415 aa13.54□□□□□ -0.24
COL27A1-201ENST00000356083 NPSP0C0P6 89 aa13.54□□□□□ -0.24
COL27A1-201ENST00000356083 UBE2D1P51668 147 aa13.54□□□□□ -0.24
COL27A1-201ENST00000356083 BLCAPP62952 87 aa13.54□□□□□ -0.24
COL27A1-201ENST00000356083 K7EP13 123 aa13.54□□□□□ -0.24
COL27A1-201ENST00000356083 HERV-K104P63124 156 aa13.54□□□□□ -0.24
COL27A1-201ENST00000356083 MLST8Q9BVC4 326 aa13.54□□□□□ -0.24
COL27A1-201ENST00000356083 C17orf58Q2M2W7 97 aa13.54□□□□□ -0.24
COL27A1-201ENST00000356083 TRAV1-1A0A0B4J248 108 aa13.54□□□□□ -0.24
COL27A1-201ENST00000356083 SPINK6Q6UWN8 80 aa13.54□□□□□ -0.24
COL27A1-201ENST00000356083 FNDC10F2Z333 226 aa13.53□□□□□ -0.24
COL27A1-201ENST00000356083 FOXI1Q12951 378 aa13.53□□□□□ -0.24
COL27A1-201ENST00000356083 PRSS47A8MTI9 375 aa13.53□□□□□ -0.24
COL27A1-201ENST00000356083 H3BRN7 92 aa13.53□□□□□ -0.24
COL27A1-201ENST00000356083 HIST2H2BDQ6DRA6 164 aa13.53□□□□□ -0.24
COL27A1-201ENST00000356083 LOXP28300 417 aaPredicted RBP13.53□□□□□ -0.24
COL27A1-201ENST00000356083 SRSF2Q01130 221 aaKnown RBP13.52□□□□□ -0.24
COL27A1-201ENST00000356083 THSD7AQ9UPZ6 1657 aa13.52□□□□□ -0.24
COL27A1-201ENST00000356083 DEFB125Q8N687 156 aa13.52□□□□□ -0.25
COL27A1-201ENST00000356083 POLR3KQ9Y2Y1 108 aaPredicted RBP13.52□□□□□ -0.25
COL27A1-201ENST00000356083 USP17L23D6RBM5 183 aa13.52□□□□□ -0.25
COL27A1-201ENST00000356083 PYY3Q5JQD4 70 aa13.52□□□□□ -0.25
COL27A1-201ENST00000356083 WFDC10BQ8IUB3 73 aa13.52□□□□□ -0.25
COL27A1-201ENST00000356083 GATA1P15976 413 aaPredicted RBP13.52□□□□□ -0.25
COL27A1-201ENST00000356083 C12orf74Q32Q52 190 aa13.52□□□□□ -0.25
COL27A1-201ENST00000356083 WDR87Q6ZQQ6 2873 aa13.52□□□□□ -0.25
COL27A1-201ENST00000356083 LHFPL1Q86WI0 220 aa13.51□□□□□ -0.25
COL27A1-201ENST00000356083 IGLV2-18A0A075B6J9 118 aa13.51□□□□□ -0.25
COL27A1-201ENST00000356083 IGKV1D-37A0A075B6S9 117 aa13.51□□□□□ -0.25
COL27A1-201ENST00000356083 LY96Q9Y6Y9 160 aa13.51□□□□□ -0.25
COL27A1-201ENST00000356083 IGHV2-5P01817 119 aa13.51□□□□□ -0.25
COL27A1-201ENST00000356083 COX8AP10176 69 aa13.51□□□□□ -0.25
COL27A1-201ENST00000356083 SPAG11BQ08648 103 aa13.51□□□□□ -0.25
COL27A1-201ENST00000356083 C11orf45Q8TAV5 145 aa13.51□□□□□ -0.25
COL27A1-201ENST00000356083 ACACBO00763 2458 aa13.51□□□□□ -0.25
COL27A1-201ENST00000356083 DIRC1Q969H9 104 aa13.51□□□□□ -0.25
COL27A1-201ENST00000356083 TRBV12-3P01733 135 aa13.51□□□□□ -0.25
COL27A1-201ENST00000356083 LRRK2Q5S007 2527 aa13.5□□□□□ -0.25
COL27A1-201ENST00000356083 NDUFS6O75380 124 aaKnown RBP13.5□□□□□ -0.25
COL27A1-201ENST00000356083 SPANXA1Q9NS26 97 aa13.5□□□□□ -0.25
COL27A1-201ENST00000356083 SH2D6Q7Z4S9 175 aa13.5□□□□□ -0.25
COL27A1-201ENST00000356083 TRBV10-2A0A0K0K1G8 114 aa13.5□□□□□ -0.25
COL27A1-201ENST00000356083 TRBV7-3A0A075B6L6 115 aa13.5□□□□□ -0.25
COL27A1-201ENST00000356083 ZNF492Q9P255 531 aa13.5□□□□□ -0.25
COL27A1-201ENST00000356083 FAM231DQ6ZW35 169 aa13.49□□□□□ -0.25
COL27A1-201ENST00000356083 CYTL1Q9NRR1 136 aa13.49□□□□□ -0.25
COL27A1-201ENST00000356083 WI2-2373I1.2A0A1W2PRP0 233 aa13.49□□□□□ -0.25
COL27A1-201ENST00000356083 J3QRE1 110 aa13.49□□□□□ -0.25
COL27A1-201ENST00000356083 B3GALT5-AS1P59052 145 aa13.49□□□□□ -0.25
COL27A1-201ENST00000356083 IGKV1-17P01599 117 aa13.48□□□□□ -0.25
COL27A1-201ENST00000356083 LYPD6Q86Y78 171 aa13.48□□□□□ -0.25
COL27A1-201ENST00000356083 WT1-ASQ06250 92 aa13.48□□□□□ -0.25
COL27A1-201ENST00000356083 Q8N9W7 124 aa13.48□□□□□ -0.25
COL27A1-201ENST00000356083 UBE2D3P61077 147 aa13.48□□□□□ -0.25
COL27A1-201ENST00000356083 IGLC7A0M8Q6 106 aa13.48□□□□□ -0.25
COL27A1-201ENST00000356083 LYPD3O95274 346 aa13.48□□□□□ -0.25
COL27A1-201ENST00000356083 CFC1BP0CG36 223 aa13.48□□□□□ -0.25
COL27A1-201ENST00000356083 CFC1P0CG37 223 aa13.48□□□□□ -0.25
COL27A1-201ENST00000356083 LGALS9BQ3B8N2 356 aa13.48□□□□□ -0.25
COL27A1-201ENST00000356083 LGALS9CQ6DKI2 356 aa13.48□□□□□ -0.25
COL27A1-201ENST00000356083 SIRPDQ9H106 197 aa13.47□□□□□ -0.25
COL27A1-201ENST00000356083 TRAV26-1A0A087WT03 109 aa13.47□□□□□ -0.25
COL27A1-201ENST00000356083 FAM236AA0A1B0GUQ0 79 aa13.47□□□□□ -0.25
COL27A1-201ENST00000356083 FAM236BA0A1B0GV22 79 aa13.47□□□□□ -0.25
COL27A1-201ENST00000356083 LECT2O14960 151 aa13.47□□□□□ -0.25
COL27A1-201ENST00000356083 PCP2Q8IVA1 136 aa13.47□□□□□ -0.25
COL27A1-201ENST00000356083 IGLL1P15814 213 aa13.47□□□□□ -0.25
COL27A1-201ENST00000356083 IGHV4-61A0A0C4DH41 118 aa13.47□□□□□ -0.25
COL27A1-201ENST00000356083 CCL25O15444 150 aa13.46□□□□□ -0.25
COL27A1-201ENST00000356083 CFPP27918 469 aa13.46□□□□□ -0.25
COL27A1-201ENST00000356083 C20orf78Q9BR46 151 aa13.46□□□□□ -0.25
COL27A1-201ENST00000356083 TRAV23DV6A0A075B6W5 121 aa13.45□□□□□ -0.26
COL27A1-201ENST00000356083 AJUBAQ96IF1 538 aa13.45□□□□□ -0.26
COL27A1-201ENST00000356083 FGF23Q9GZV9 251 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-201ENST00000356083 RPL39P62891 51 aaKnown RBP13.44□□□□□ -0.26
COL27A1-201ENST00000356083 KIR2DL5BQ8NHK3 375 aa13.44□□□□□ -0.26
COL27A1-201ENST00000356083 FXYD5Q96DB9 178 aa13.44□□□□□ -0.26
COL27A1-201ENST00000356083 A0A0B4J2C4 111 aa13.44□□□□□ -0.26
COL27A1-201ENST00000356083 X6R8D5 127 aa13.44□□□□□ -0.26
COL27A1-201ENST00000356083 LY6G6CO95867 125 aa13.44□□□□□ -0.26
COL27A1-201ENST00000356083 TEX49A0A1B0GTD5 131 aa13.43□□□□□ -0.26
COL27A1-201ENST00000356083 CRYGDP07320 174 aa13.43□□□□□ -0.26
COL27A1-201ENST00000356083 Q6ZR03 302 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms