RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 TRAV26-1A0A087WT03 109 aa10.91□□□□□ -0.66
TRIM13-201ENST00000356017 RNF212Q495C1 297 aa10.91□□□□□ -0.66
TRIM13-201ENST00000356017 SVBPQ8N300 66 aa10.91□□□□□ -0.66
TRIM13-201ENST00000356017 C15orf53Q8NAA6 179 aa10.91□□□□□ -0.66
TRIM13-201ENST00000356017 PGLYRP4Q96LB8 373 aa10.91□□□□□ -0.66
TRIM13-201ENST00000356017 AP1S3Q96PC3 154 aa10.91□□□□□ -0.66
TRIM13-201ENST00000356017 JPT2Q9H910 190 aa10.91□□□□□ -0.66
TRIM13-201ENST00000356017 SMIM27A0A1W2PRY6 76 aa10.91□□□□□ -0.66
TRIM13-201ENST00000356017 TRGC1P0CF51 173 aa10.91□□□□□ -0.66
TRIM13-201ENST00000356017 SMIM17P0DL12 118 aa10.91□□□□□ -0.66
TRIM13-201ENST00000356017 TWIST1Q15672 202 aa10.91□□□□□ -0.66
TRIM13-201ENST00000356017 TMA7Q9Y2S6 64 aaKnown RBP10.91□□□□□ -0.66
TRIM13-201ENST00000356017 PAX4O43316 350 aa10.9□□□□□ -0.66
TRIM13-201ENST00000356017 CRYGDP07320 174 aa10.9□□□□□ -0.66
TRIM13-201ENST00000356017 CRYBA4P53673 196 aa10.9□□□□□ -0.66
TRIM13-201ENST00000356017 FAM74A4Q5TZK3 123 aa10.9□□□□□ -0.66
TRIM13-201ENST00000356017 UFSP1Q6NVU6 142 aa10.9□□□□□ -0.66
TRIM13-201ENST00000356017 SAMD10Q9BYL1 202 aa10.9□□□□□ -0.66
TRIM13-201ENST00000356017 A0A087WWL8 130 aa10.89□□□□□ -0.67
TRIM13-201ENST00000356017 IGHV3-73A0A0B4J1V6 119 aa10.89□□□□□ -0.67
TRIM13-201ENST00000356017 A0A1B0GUT8 65 aa10.89□□□□□ -0.67
TRIM13-201ENST00000356017 TRBV6-4A0A1B0GX49 114 aa10.89□□□□□ -0.67
TRIM13-201ENST00000356017 GATA1P15976 413 aaPredicted RBP10.89□□□□□ -0.67
TRIM13-201ENST00000356017 NUP35Q8NFH5 326 aa10.89□□□□□ -0.67
TRIM13-201ENST00000356017 MSRB1Q9NZV6 116 aa10.89□□□□□ -0.67
TRIM13-201ENST00000356017 A0A0J9YY99 117 aa10.88□□□□□ -0.67
TRIM13-201ENST00000356017 SMIM15Q7Z3B0 74 aa10.88□□□□□ -0.67
TRIM13-201ENST00000356017 C14orf178Q8N769 122 aaPredicted RBP10.88□□□□□ -0.67
TRIM13-201ENST00000356017 CLRN3Q8NCR9 226 aa10.88□□□□□ -0.67
TRIM13-201ENST00000356017 CTDSP1Q9GZU7 261 aa10.88□□□□□ -0.67
TRIM13-201ENST00000356017 APLNQ9ULZ1 77 aa10.88□□□□□ -0.67
TRIM13-201ENST00000356017 SNAPINO95295 136 aa10.87□□□□□ -0.67
TRIM13-201ENST00000356017 VSIG2Q96IQ7 327 aa10.87□□□□□ -0.67
TRIM13-201ENST00000356017 PRADC1Q9BSG0 188 aa10.87□□□□□ -0.67
TRIM13-201ENST00000356017 RAB4BP61018 213 aa10.87□□□□□ -0.67
TRIM13-201ENST00000356017 RIGQ13278 110 aa10.87□□□□□ -0.67
TRIM13-201ENST00000356017 RHEBQ15382 184 aa10.87□□□□□ -0.67
TRIM13-201ENST00000356017 RHOHQ15669 191 aa10.87□□□□□ -0.67
TRIM13-201ENST00000356017 SLC25A29Q8N8R3 303 aa10.87□□□□□ -0.67
TRIM13-201ENST00000356017 CSMD3Q7Z407 3707 aa10.87□□□□□ -0.67
TRIM13-201ENST00000356017 NUDT3O95989 172 aa10.86□□□□□ -0.67
TRIM13-201ENST00000356017 EVI2AP22794 236 aa10.86□□□□□ -0.67
TRIM13-201ENST00000356017 CBLN2Q8IUK8 224 aa10.86□□□□□ -0.67
TRIM13-201ENST00000356017 IMMP2LQ96T52 175 aa10.86□□□□□ -0.67
TRIM13-201ENST00000356017 DPH3P1Q9H4G8 78 aa10.86□□□□□ -0.67
TRIM13-201ENST00000356017 TMEM242Q9NWH2 141 aa10.86□□□□□ -0.67
TRIM13-201ENST00000356017 KIF25-AS1Q9Y6Z4 181 aa10.86□□□□□ -0.67
TRIM13-201ENST00000356017 A0A1B0GW15 77 aa10.85□□□□□ -0.67
TRIM13-201ENST00000356017 F5H697 171 aa10.85□□□□□ -0.67
TRIM13-201ENST00000356017 ZNF56Q15929 161 aa10.85□□□□□ -0.67
TRIM13-201ENST00000356017 MRPL23Q16540 153 aaKnown RBP10.85□□□□□ -0.67
TRIM13-201ENST00000356017 ICOSQ9Y6W8 199 aa10.85□□□□□ -0.67
TRIM13-201ENST00000356017 A0A087WWC5 75 aa10.84□□□□□ -0.67
TRIM13-201ENST00000356017 C7orf77A4D0Y5 90 aa10.84□□□□□ -0.67
TRIM13-201ENST00000356017 K7EQD1 137 aa10.84□□□□□ -0.67
TRIM13-201ENST00000356017 GYPEP15421 78 aa10.84□□□□□ -0.67
TRIM13-201ENST00000356017 Q6ZSN1 163 aa10.84□□□□□ -0.67
TRIM13-201ENST00000356017 SH2D6Q7Z4S9 175 aa10.84□□□□□ -0.67
TRIM13-201ENST00000356017 TRBV10-1A0A0K0K1A3 114 aa10.83□□□□□ -0.68
TRIM13-201ENST00000356017 S100A8P05109 93 aa10.83□□□□□ -0.68
TRIM13-201ENST00000356017 FAM3BP58499 235 aaPredicted RBP10.83□□□□□ -0.68
TRIM13-201ENST00000356017 LINC00315P59091 139 aa10.83□□□□□ -0.68
TRIM13-201ENST00000356017 KCNIP4Q6PIL6 250 aa10.83□□□□□ -0.68
TRIM13-201ENST00000356017 TMEM191AQ9H0A3 160 aa10.83□□□□□ -0.68
TRIM13-201ENST00000356017 RPS10P5Q9NQ39 176 aa10.83□□□□□ -0.68
TRIM13-201ENST00000356017 STARD9Q9P2P6 4700 aa10.83□□□□□ -0.68
TRIM13-201ENST00000356017 A0A096LPF7 62 aa10.82□□□□□ -0.68
TRIM13-201ENST00000356017 H7C1H1 209 aa10.82□□□□□ -0.68
TRIM13-201ENST00000356017 MGPP08493 103 aa10.82□□□□□ -0.68
TRIM13-201ENST00000356017 P0DMU3 169 aa10.82□□□□□ -0.68
TRIM13-201ENST00000356017 FAM231AP0DMU4 169 aa10.82□□□□□ -0.68
TRIM13-201ENST00000356017 FAM231CP0DMU5 169 aa10.82□□□□□ -0.68
TRIM13-201ENST00000356017 SRIP30626 198 aa10.82□□□□□ -0.68
TRIM13-201ENST00000356017 ATP5L2Q7Z4Y8 100 aa10.82□□□□□ -0.68
TRIM13-201ENST00000356017 BTF3L4Q96K17 158 aa10.82□□□□□ -0.68
TRIM13-201ENST00000356017 NACAE9PAV3 2078 aa10.81□□□□□ -0.68
TRIM13-201ENST00000356017 NEGR1Q7Z3B1 354 aa10.81□□□□□ -0.68
TRIM13-201ENST00000356017 S100PP25815 95 aa10.8□□□□□ -0.68
TRIM13-201ENST00000356017 HBBP68871 147 aa10.8□□□□□ -0.68
TRIM13-201ENST00000356017 FRZBQ92765 325 aa10.8□□□□□ -0.68
TRIM13-201ENST00000356017 DYNC2H1Q8NCM8 4307 aaKnown RBP10.8□□□□□ -0.68
TRIM13-201ENST00000356017 TRAV9-1A0A075B6T8 112 aa10.8□□□□□ -0.68
TRIM13-201ENST00000356017 LOC100131303A0A0U1RQF7 123 aa10.8□□□□□ -0.68
TRIM13-201ENST00000356017 CAMPP49913 170 aa10.8□□□□□ -0.68
TRIM13-201ENST00000356017 CCL18P55774 89 aa10.8□□□□□ -0.68
TRIM13-201ENST00000356017 LGALS9CQ6DKI2 356 aa10.8□□□□□ -0.68
TRIM13-201ENST00000356017 MRPL54Q6P161 138 aaKnown RBP10.8□□□□□ -0.68
TRIM13-201ENST00000356017 RPL36AP83881 106 aaKnown RBP10.79□□□□□ -0.68
TRIM13-201ENST00000356017 RPL36ALQ969Q0 106 aaKnown RBP10.79□□□□□ -0.68
TRIM13-201ENST00000356017 A0A1B0GXF2 115 aa10.78□□□□□ -0.68
TRIM13-201ENST00000356017 M0QY20 66 aa10.78□□□□□ -0.68
TRIM13-201ENST00000356017 SUMO4Q6EEV6 95 aa10.78□□□□□ -0.68
TRIM13-201ENST00000356017 TRBV7-3A0A075B6L6 115 aa10.77□□□□□ -0.68
TRIM13-201ENST00000356017 GAGE12JA6NER3 117 aa10.77□□□□□ -0.68
TRIM13-201ENST00000356017 GAGE1Q13065 139 aa10.77□□□□□ -0.68
TRIM13-201ENST00000356017 GAGE4Q13068 117 aa10.77□□□□□ -0.68
TRIM13-201ENST00000356017 GAGE5Q13069 117 aa10.77□□□□□ -0.68
TRIM13-201ENST00000356017 GAGE13Q4V321 117 aa10.77□□□□□ -0.68
TRIM13-201ENST00000356017 RASL11AQ6T310 242 aa10.76□□□□□ -0.69
TRIM13-201ENST00000356017 UBE2DNLQ8IWF7 75 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms