RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 C9orf47Q6ZRZ4 202 aa8.73□□□□□ -1.01
FN1-204ENST00000356005 NDUFA1O15239 70 aa8.73□□□□□ -1.01
FN1-204ENST00000356005 SPRNQ5BIV9 151 aa8.73□□□□□ -1.01
FN1-204ENST00000356005 TRAV4A0A0B4J268 109 aa8.73□□□□□ -1.01
FN1-204ENST00000356005 LYRM9A8MSI8 78 aa8.73□□□□□ -1.01
FN1-204ENST00000356005 AGPAT4-IT1Q9H0P7 198 aa8.73□□□□□ -1.01
FN1-204ENST00000356005 Q6ZSR3 168 aa8.73□□□□□ -1.01
FN1-204ENST00000356005 FANCD2OSQ96PS1 177 aa8.73□□□□□ -1.01
FN1-204ENST00000356005 SPANXDQ9BXN6 97 aa8.73□□□□□ -1.01
FN1-204ENST00000356005 IGLV1-47P01700 117 aa8.72□□□□□ -1.01
FN1-204ENST00000356005 CTSGP08311 255 aa8.72□□□□□ -1.01
FN1-204ENST00000356005 PRO0255Q9UI72 69 aa8.72□□□□□ -1.01
FN1-204ENST00000356005 COL4A3Q01955 1670 aa8.72□□□□□ -1.01
FN1-204ENST00000356005 TRAV26-2A0A0B4J265 109 aa8.72□□□□□ -1.01
FN1-204ENST00000356005 LY6G6DO95868 133 aa8.72□□□□□ -1.01
FN1-204ENST00000356005 ANKRD11Q6UB99 2663 aaPredicted RBP8.72□□□□□ -1.01
FN1-204ENST00000356005 PRSS47A8MTI9 375 aa8.72□□□□□ -1.01
FN1-204ENST00000356005 FUSP35637 526 aaKnown RBP eCLIP8.72□□□□□ -1.014e-8■■■□□ 14.6
FN1-204ENST00000356005 NFE4Q86UQ8 179 aa8.72□□□□□ -1.01
FN1-204ENST00000356005 Q8N7P7 452 aa8.72□□□□□ -1.01
FN1-204ENST00000356005 MED14OSP0DP75 135 aa8.71□□□□□ -1.01
FN1-204ENST00000356005 LGALS9O00182 355 aa8.71□□□□□ -1.01
FN1-204ENST00000356005 SPINK8P0C7L1 97 aa8.71□□□□□ -1.01
FN1-204ENST00000356005 LMO4P61968 165 aa8.71□□□□□ -1.01
FN1-204ENST00000356005 HIST3H2BBQ8N257 126 aa8.71□□□□□ -1.01
FN1-204ENST00000356005 F6UB75 175 aa8.71□□□□□ -1.01
FN1-204ENST00000356005 IGHV3-30P01768 117 aa8.71□□□□□ -1.01
FN1-204ENST00000356005 IGHV3-33P01772 117 aa8.71□□□□□ -1.01
FN1-204ENST00000356005 IGHV3-30-3P0DP02 117 aa8.71□□□□□ -1.01
FN1-204ENST00000356005 IGHV3-30-5P0DP03 117 aa8.71□□□□□ -1.01
FN1-204ENST00000356005 IL15RAQ13261 267 aa8.71□□□□□ -1.01
FN1-204ENST00000356005 KIR2DL5BQ8NHK3 375 aa8.71□□□□□ -1.01
FN1-204ENST00000356005 C11orf52Q96A22 123 aa8.71□□□□□ -1.01
FN1-204ENST00000356005 LGALS9BQ3B8N2 356 aa8.71□□□□□ -1.02
FN1-204ENST00000356005 LGALS9CQ6DKI2 356 aa8.71□□□□□ -1.02
FN1-204ENST00000356005 WFDC11Q8NEX6 87 aa8.71□□□□□ -1.02
FN1-204ENST00000356005 EGR2P11161 476 aaPredicted RBP8.71□□□□□ -1.02
FN1-204ENST00000356005 GAGE2AQ6NT46 116 aa8.71□□□□□ -1.02
FN1-204ENST00000356005 hADV29S1A0JD25 119 aa8.7□□□□□ -1.02
FN1-204ENST00000356005 PRR20EP86478 221 aa8.7□□□□□ -1.02
FN1-204ENST00000356005 PRR20CP86479 221 aa8.7□□□□□ -1.02
FN1-204ENST00000356005 PRR20DP86480 221 aa8.7□□□□□ -1.02
FN1-204ENST00000356005 PRR20BP86481 221 aa8.7□□□□□ -1.02
FN1-204ENST00000356005 PRR20AP86496 221 aa8.7□□□□□ -1.02
FN1-204ENST00000356005 LINC01548A6NM66 108 aa8.7□□□□□ -1.02
FN1-204ENST00000356005 CYYR1Q96J86 154 aa8.7□□□□□ -1.02
FN1-204ENST00000356005 TRBV10-1A0A0K0K1A3 114 aa8.7□□□□□ -1.02
FN1-204ENST00000356005 ZFAND6Q6FIF0 208 aa8.7□□□□□ -1.02
FN1-204ENST00000356005 ZFP2Q6ZN57 461 aa8.7□□□□□ -1.02
FN1-204ENST00000356005 C3orf79P0CE67 100 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 V9GYV3 84 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 WI2-2373I1.2A0A1W2PRP0 233 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 C9JQL5 133 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 NDUFS5O43920 106 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.69□□□□□ -1.02
FN1-204ENST00000356005 IGKV2-29A2NJV5 120 aaPredicted RBP8.69□□□□□ -1.02
FN1-204ENST00000356005 ODF3Q96PU9 254 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 A0A087X0K7 114 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 J3QQQ9 107 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 MIFP14174 115 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 GAGE2BQ13066 116 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 ATRAIDQ6UW56 229 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 MRPL52Q86TS9 123 aaKnown RBP8.69□□□□□ -1.02
FN1-204ENST00000356005 C18orf32Q8TCD1 76 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 CCL25O15444 150 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 Q6ZVH6 145 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 ABCA12Q86UK0 2595 aa8.69□□□□□ -1.02
FN1-204ENST00000356005 C9JAW5 83 aa8.68□□□□□ -1.02
FN1-204ENST00000356005 NDUFB1O75438 58 aa8.68□□□□□ -1.02
FN1-204ENST00000356005 CITED1Q99966 193 aa8.68□□□□□ -1.02
FN1-204ENST00000356005 KIR3DS1Q14943 382 aa8.68□□□□□ -1.02
FN1-204ENST00000356005 C5orf38Q86SI9 138 aa8.68□□□□□ -1.02
FN1-204ENST00000356005 RITA1Q96K30 269 aa8.68□□□□□ -1.02
FN1-204ENST00000356005 SIGMAR1Q99720 223 aa8.68□□□□□ -1.02
FN1-204ENST00000356005 IGF1P05019 195 aa8.67□□□□□ -1.02
FN1-204ENST00000356005 C17orf77Q96MU5 243 aa8.67□□□□□ -1.02
FN1-204ENST00000356005 IGKV1-17P01599 117 aa8.67□□□□□ -1.02
FN1-204ENST00000356005 UTF1Q5T230 341 aa8.67□□□□□ -1.02
FN1-204ENST00000356005 PRO1854Q9UHT4 67 aa8.67□□□□□ -1.02
FN1-204ENST00000356005 HLA-DMBP28068 263 aa8.67□□□□□ -1.02
FN1-204ENST00000356005 C19orf84I3L1E1 186 aa8.67□□□□□ -1.02
FN1-204ENST00000356005 Q8N1Y9 231 aa8.67□□□□□ -1.02
FN1-204ENST00000356005 MAP6D1Q9H9H5 199 aa8.67□□□□□ -1.02
FN1-204ENST00000356005 COLCA2A8K830 154 aa8.67□□□□□ -1.02
FN1-204ENST00000356005 DEFB105AQ8NG35 78 aa8.66□□□□□ -1.02
FN1-204ENST00000356005 B9D2Q9BPU9 175 aa8.66□□□□□ -1.02
FN1-204ENST00000356005 IGLV10-54A0A075B6I4 117 aa8.66□□□□□ -1.02
FN1-204ENST00000356005 TMEM61Q8N0U2 210 aa8.66□□□□□ -1.02
FN1-204ENST00000356005 DEFB131BA0A096LNP1 70 aa8.66□□□□□ -1.02
FN1-204ENST00000356005 DEFB125Q8N687 156 aa8.66□□□□□ -1.02
FN1-204ENST00000356005 TEX22C9J3V5 150 aa8.66□□□□□ -1.02
FN1-204ENST00000356005 MBD6Q96DN6 1003 aa8.66□□□□□ -1.02
FN1-204ENST00000356005 Q9H8V8 135 aa8.66□□□□□ -1.02
FN1-204ENST00000356005 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
FN1-204ENST00000356005 PCSK5Q92824 1860 aa8.65□□□□□ -1.02
FN1-204ENST00000356005 ODF3BA8MYP8 253 aa8.65□□□□□ -1.02
FN1-204ENST00000356005 IFITM1P13164 125 aa8.65□□□□□ -1.02
FN1-204ENST00000356005 KLK12Q9UKR0 248 aa8.65□□□□□ -1.02
FN1-204ENST00000356005 FGF6P10767 208 aa8.65□□□□□ -1.02
FN1-204ENST00000356005 HIST2H2BCQ6DN03 193 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms