RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 PRR20CP86479 221 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 PRR20DP86480 221 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 PRR20BP86481 221 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 PRR20AP86496 221 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 ZNF491Q8N8L2 437 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 FNDC1Q4ZHG4 1894 aaPredicted RBP4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 SPRY2O43597 315 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 Q6ZR03 302 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 COL5A3P25940 1745 aaPredicted RBP4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 JMJD7-PLA2G4BH0Y9G9 81 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 DIAPH2-AS1Q14236 149 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 C14orf177Q52M58 125 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 SPAG11BQ08648 103 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 GTSF1Q8WW33 167 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 POU2AF1Q16633 256 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 DAND5Q8N907 189 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 CENPVL3A0A0U1RRI6 287 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 ZNF726P1Q15940 193 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 GPHB5Q86YW7 130 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 CXCL5P42830 114 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 SMIM20Q8N5G0 67 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 IGHV4-38-2P0DP08 117 aa4.52□□□□□ -1.69
SRGAP1-201ENST00000355086 FGF23Q9GZV9 251 aaPredicted RBP4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 GATA1P15976 413 aaPredicted RBP4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 AGPAT4-IT1Q9H0P7 198 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 KIAA1549Q9HCM3 1950 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 BRK1Q8WUW1 75 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 FAM110AQ9BQ89 295 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 KLK12Q9UKR0 248 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 COL4A5P29400 1685 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 IGLV1-44P01699 117 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 C2CD3Q4AC94 2353 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 DEFB135Q30KP9 77 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 ANKRD39Q53RE8 183 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 ZNF747Q9BV97 191 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 ZFHX2Q9C0A1 2572 aaPredicted RBP4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 BPY2O14599 106 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 GREB1LQ9C091 1923 aaPredicted RBP4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 K7EN84 100 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 NRXN2Q9P2S2 1712 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 A4D1N5 150 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 USP17L23D6RBM5 183 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 IGFL3Q6UXB1 125 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 KIR2DL5BA0A0G2JN68 375 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 KIR2DL5BA0A0G2JPC4 375 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 KIR2DL5AQ8N109 375 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 HIVEP3Q5T1R4 2406 aa4.51□□□□□ -1.69
SRGAP1-201ENST00000355086 IGHV4-30-2A0A087WSY4 118 aa4.5□□□□□ -1.69
SRGAP1-201ENST00000355086 TRBV10-2A0A0K0K1G8 114 aa4.5□□□□□ -1.69
SRGAP1-201ENST00000355086 AJUBAQ96IF1 538 aa4.5□□□□□ -1.69
SRGAP1-201ENST00000355086 DEFB4AO15263 64 aa4.5□□□□□ -1.69
SRGAP1-201ENST00000355086 BRWD3Q6RI45 1802 aa4.5□□□□□ -1.69
SRGAP1-201ENST00000355086 SMAD5-AS1Q9Y6J3 95 aa4.5□□□□□ -1.69
SRGAP1-201ENST00000355086 J3KT08 172 aa4.5□□□□□ -1.69
SRGAP1-201ENST00000355086 LGALS9O00182 355 aa4.5□□□□□ -1.69
SRGAP1-201ENST00000355086 KAAG1Q9UBP8 84 aa4.5□□□□□ -1.69
SRGAP1-201ENST00000355086 HCFC1P51610 2035 aa4.5□□□□□ -1.69
SRGAP1-201ENST00000355086 Q8N1Y9 231 aa4.5□□□□□ -1.69
SRGAP1-201ENST00000355086 C3orf22Q8N5N4 141 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 C2orf70A6NJV1 201 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 IGHV4-61A0A0C4DH41 118 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 PDE6GP18545 87 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 LECT2O14960 151 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 KIR2DL5BQ8NHK3 375 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 IL17DQ8TAD2 202 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 IGKV2-24A0A0C4DH68 120 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 TAX1BP3O14907 124 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 WI2-2373I1.2A0A1W2PRP0 233 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 HIGD2AQ9BW72 106 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 IGKV2D-26A0A0A0MRZ7 120 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 IGHV2-70P01814 119 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 PRR15LQ9BU68 103 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 COX7BP24311 80 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 A0A0G2JMZ2 1700 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 LRRC37A2A6NM11 1700 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 IGHV7-81A0A0B4J1V7 117 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 BLCAPP62952 87 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 MIR7-3HGQ8N6C7 128 aa4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 RPL39P62891 51 aaKnown RBP4.49□□□□□ -1.69
SRGAP1-201ENST00000355086 GRNP28799 593 aaKnown RBP4.48□□□□□ -1.69
SRGAP1-201ENST00000355086 CUL9Q8IWT3 2517 aa4.48□□□□□ -1.69
SRGAP1-201ENST00000355086 ANAPC1Q9H1A4 1944 aa4.48□□□□□ -1.69
SRGAP1-201ENST00000355086 A0A0J9YXV3 536 aa4.48□□□□□ -1.69
SRGAP1-201ENST00000355086 UPK3BQ9BT76 320 aa4.48□□□□□ -1.69
SRGAP1-201ENST00000355086 WFDC11Q8NEX6 87 aa4.48□□□□□ -1.69
SRGAP1-201ENST00000355086 C16orf54Q6UWD8 224 aa4.48□□□□□ -1.69
SRGAP1-201ENST00000355086 MPLKIPQ8TAP9 179 aa4.48□□□□□ -1.69
SRGAP1-201ENST00000355086 CLEC2BQ92478 149 aa4.48□□□□□ -1.69
SRGAP1-201ENST00000355086 C11orf45Q8TAV5 145 aa4.48□□□□□ -1.69
SRGAP1-201ENST00000355086 THSD7AQ9UPZ6 1657 aa4.48□□□□□ -1.69
SRGAP1-201ENST00000355086 CRYGBP07316 175 aa4.48□□□□□ -1.69
SRGAP1-201ENST00000355086 AGRNO00468 2067 aa4.48□□□□□ -1.69
SRGAP1-201ENST00000355086 FOXI1Q12951 378 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 Q8NFD4 153 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 ZNF503-AS2A6NEH8 195 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 TRAV23DV6A0A075B6W5 121 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 ANKHD1Q8IWZ3 2542 aaKnown RBP4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 PROK2Q9HC23 129 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 TEN1Q86WV5 123 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 C4orf3Q8WVX3 66 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms