RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 J3KRW8 73 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 BRI3O95415 125 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 PLNP26678 52 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 Q6ZSV7 163 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 FAM223AQ8IWN6 122 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 Q8N2B8 174 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 MRPL53Q96EL3 112 aaKnown RBP6.46□□□□□ -1.38
TRIM55-204ENST00000353317 U3KQE9 123 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 C12orf74Q32Q52 190 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 FOXI2Q6ZQN5 318 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 C16orf92Q96LL3 132 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 C20orf173Q96LM9 149 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 SMIM2Q9BVW6 85 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 F8VRH5 84 aa6.45□□□□□ -1.38
TRIM55-204ENST00000353317 ARL3P36405 182 aa6.45□□□□□ -1.38
TRIM55-204ENST00000353317 WFDC2Q14508 124 aa6.45□□□□□ -1.38
TRIM55-204ENST00000353317 ZNF479Q96JC4 524 aa6.45□□□□□ -1.38
TRIM55-204ENST00000353317 HIST1H4GQ99525 98 aa6.45□□□□□ -1.38
TRIM55-204ENST00000353317 ZNF580Q9UK33 172 aa6.45□□□□□ -1.38
TRIM55-204ENST00000353317 H3BMG7 143 aa6.45□□□□□ -1.38
TRIM55-204ENST00000353317 H7C1H1 209 aa6.45□□□□□ -1.38
TRIM55-204ENST00000353317 M0R381 172 aa6.45□□□□□ -1.38
TRIM55-204ENST00000353317 TAL2Q16559 108 aa6.45□□□□□ -1.38
TRIM55-204ENST00000353317 MRAP2Q96G30 205 aa6.45□□□□□ -1.38
TRIM55-204ENST00000353317 TRBV7-3A0A075B6L6 115 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 TRAV12-1A0A0B4J245 112 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 INAFM1C9JVW0 142 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 H3BUA1 57 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 DEFB1P60022 68 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 SUMO2P61956 95 aaKnown RBP6.44□□□□□ -1.38
TRIM55-204ENST00000353317 AMTNQ6UX39 209 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 RASL10AQ92737 203 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 RPL39LQ96EH5 51 aaKnown RBP6.44□□□□□ -1.38
TRIM55-204ENST00000353317 USMG5Q96IX5 58 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 AGRNO00468 2067 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 F8W1H4 67 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 GPHB5Q86YW7 130 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 ZFAND2AQ8N6M9 145 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 NEXN-AS1Q8NBZ9 246 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 GLMPQ8WWB7 406 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 TOMM6Q96B49 74 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 SCGB3A1Q96QR1 104 aa6.44□□□□□ -1.38
TRIM55-204ENST00000353317 CHTOPQ9Y3Y2 248 aaKnown RBP6.44□□□□□ -1.38
TRIM55-204ENST00000353317 MYMXA0A1B0GTQ4 84 aa6.43□□□□□ -1.38
TRIM55-204ENST00000353317 ORMDL2Q53FV1 153 aa6.43□□□□□ -1.38
TRIM55-204ENST00000353317 MTURNQ8N3F0 131 aa6.43□□□□□ -1.38
TRIM55-204ENST00000353317 C14orf178Q8N769 122 aaPredicted RBP6.43□□□□□ -1.38
TRIM55-204ENST00000353317 SPANXB1Q9NS25 103 aaPredicted RBP6.43□□□□□ -1.38
TRIM55-204ENST00000353317 VWFP04275 2813 aa6.43□□□□□ -1.38
TRIM55-204ENST00000353317 OR11H12B2RN74 326 aa6.43□□□□□ -1.38
TRIM55-204ENST00000353317 DEFB136Q30KP8 78 aa6.43□□□□□ -1.38
TRIM55-204ENST00000353317 SH2D6Q7Z4S9 175 aa6.43□□□□□ -1.38
TRIM55-204ENST00000353317 TMEM86BQ8N661 226 aa6.43□□□□□ -1.38
TRIM55-204ENST00000353317 OR11H1Q8NG94 326 aa6.43□□□□□ -1.38
TRIM55-204ENST00000353317 OR11H2Q8NH07 326 aa6.43□□□□□ -1.38
TRIM55-204ENST00000353317 CYSLTR1Q9Y271 337 aa6.43□□□□□ -1.38
TRIM55-204ENST00000353317 SRD5A1P18405 259 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 ETDBQ3ZM63 59 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 C11orf44Q8N8P7 122 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 BAALCQ8WXS3 180 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 DUX3Q96PT4 197 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 LENEPQ9Y5L5 61 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 A0A1B0GWB2 263 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 S100A4P26447 101 aaKnown RBP6.42□□□□□ -1.38
TRIM55-204ENST00000353317 RRN3P1Q2M238 152 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 C2orf66Q6UXQ4 117 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 RNF152Q8N8N0 203 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 LINC00477Q96M19 166 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 C20orf78Q9BR46 151 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 DPH3P1Q9H4G8 78 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 PHLDA3Q9Y5J5 127 aa6.42□□□□□ -1.38
TRIM55-204ENST00000353317 IGHV4OR15-8A0A075B7B6 117 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 A0A087WW49 117 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 TRAV21A0A0B4J279 112 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 LGALS1P09382 135 aaKnown RBP6.41□□□□□ -1.38
TRIM55-204ENST00000353317 ANXA2RQ3ZCQ2 193 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 GTSF1LQ9H1H1 148 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 TSSC4Q9Y5U2 329 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-204ENST00000353317 PRSS29PA6NIE9 313 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 F6UB75 175 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 LINC01619G3V211 115 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 NDUFA4O00483 81 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 SOCS3O14543 225 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 GNRH2O43555 120 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 MGPP08493 103 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 AZU1P20160 251 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 HILS1P60008 231 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 SAMD13Q5VXD3 122 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 MORN3Q6PF18 240 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-204ENST00000353317 OR10J6PQ8NGY7 276 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 LINC01006Q8NI28 216 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 ATP6V0BQ99437 205 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 PRADC1Q9BSG0 188 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 PRO0461Q9UI25 63 aa6.41□□□□□ -1.38
TRIM55-204ENST00000353317 ATRQ13535 2644 aa6.4□□□□□ -1.38
TRIM55-204ENST00000353317 RNASE1P07998 156 aaKnown RBP6.4□□□□□ -1.38
TRIM55-204ENST00000353317 ELANEP08246 267 aa6.4□□□□□ -1.38
TRIM55-204ENST00000353317 ASIPP42127 132 aa6.4□□□□□ -1.38
TRIM55-204ENST00000353317 GAGE13Q4V321 117 aa6.4□□□□□ -1.38
TRIM55-204ENST00000353317 SPAG8Q99932 426 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms